FFCP PHASE1:Mm9::chr15:101055056..101055069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380977 | |EntrezGene=380977 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |MCL_coexpression_id=7 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_NR_045327_5end | |association_with_transcript=138bp_to_NR_045327_5end | ||
|cluster_id=chr15:101055056..101055069,- | |||
|description=CAGE_peak_3_at_A330009N23Rik_5end | |description=CAGE_peak_3_at_A330009N23Rik_5end | ||
|id=chr15:101055056..101055069,- | |id=chr15:101055056..101055069,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.61e-09,6;CL:0002489,1.61e-09,6;CL:0000898,1.61e-09,6;CL:0000809,1.61e-09,6;CL:0000810,1.61e-09,6;CL:0000895,1.61e-09,6;CL:0000808,1.61e-09,6;CL:0000894,1.61e-09,6;CL:0000806,1.61e-09,6;CL:0000807,1.61e-09,6;CL:0000805,1.61e-09,6;CL:0002425,1.61e-09,6;CL:0002436,1.61e-09,6;CL:0002427,1.61e-09,6;CL:0002428,1.61e-09,6;CL:0002429,1.61e-09,6;CL:0002433,1.61e-09,6;CL:0002431,1.61e-09,6;CL:0002432,1.61e-09,6;CL:0000624,2.29e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-08,14;UBERON:0003135,4.53e-08,15;UBERON:0003101,1.32e-07,16;UBERON:0000079,1.32e-07,16;UBERON:0004176,3.40e-07,17;UBERON:0009196,3.40e-07,17;UBERON:0009117,3.40e-07,17;UBERON:0000991,7.90e-07,18;UBERON:0005564,7.90e-07,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.387369970324729,3.51971805379167,8.19225842126977,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0.522399578277871,0,0.45881856213434,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0.359445373517761,0,0.127070227073065,0,0,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.407357455401265,0,0,0,0.520481771850815,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0.469380496577004,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.283880170416537,0.712262414669021,0.488660878060728,0.494910368917606,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0.330916980914195,0.388902376688095,1.16243841129958,1.35164900392623,1.05621514781179,0.781226309063701,0.419437377702843,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0,0.192075457214608,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.661774257358546,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.387369970324729,3.51971805379167,8.19225842126977,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0.522399578277871,0,0.45881856213434,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0.194429899074283,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0,0,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0.359445373517761,0,0.127070227073065,0,0,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.407357455401265,0,0,0,0.520481771850815,0,0.360124259610698,0.30140963567143,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,0.696504333044333,0,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.210289948564127,0,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.569003702859245,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0.469380496577004,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,0.321101179975584,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.584511715822624,0,0.321321316421807,0.283880170416537,0.712262414669021,0.488660878060728,0.494910368917606,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,0,0.36012218806262,0.517434735131018,0.643011105094777,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0.21183207086382,0,0.16488625294148,0,0.180938774784468,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,0,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0,0.247960367176008,0,0,0,0,0,0.330916980914195,0.388902376688095,1.16243841129958,1.35164900392623,1.05621514781179,0.781226309063701,0.419437377702843,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0.179427713218951,0.335769232728157,0,0,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0,0.192075457214608,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.294397840268795,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.338458431566706,0.548783918618318,0.526139422875686,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.661774257358546,0 | ||
|short_description=p3@A330009N23Rik | |short_description=p3@A330009N23Rik | ||
}} | }} |
Latest revision as of 12:42, 26 September 2015
Short description: | p3@A330009N23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_A330009N23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 138bp_to_NR_045327_5end |
EntrezGene: | A330009N23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.61e-09 | 6 |
double negative thymocyte | 1.61e-09 | 6 |
naive T cell | 1.61e-09 | 6 |
double-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta thymocyte | 1.61e-09 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.61e-09 | 6 |
DN4 thymocyte | 1.61e-09 | 6 |
DN1 thymic pro-T cell | 1.61e-09 | 6 |
DN2 thymocyte | 1.61e-09 | 6 |
DN3 thymocyte | 1.61e-09 | 6 |
immature single positive thymocyte | 1.61e-09 | 6 |
early T lineage precursor | 1.61e-09 | 6 |
mature CD4 single-positive thymocyte | 1.61e-09 | 6 |
resting double-positive thymocyte | 1.61e-09 | 6 |
double-positive blast | 1.61e-09 | 6 |
CD69-positive double-positive thymocyte | 1.61e-09 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.61e-09 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.61e-09 | 6 |
CD4-positive, alpha-beta T cell | 2.29e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-08 | 14 |
male reproductive organ | 4.53e-08 | 15 |
male organism | 1.32e-07 | 16 |
male reproductive system | 1.32e-07 | 16 |
external genitalia | 3.40e-07 | 17 |
indifferent external genitalia | 3.40e-07 | 17 |
indifferent gonad | 3.40e-07 | 17 |
gonad | 7.90e-07 | 18 |
gonad primordium | 7.90e-07 | 18 |