FFCP PHASE1:Mm9::chr6:119058565..119058634,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12288 | |EntrezGene=12288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |MCL_coexpression_id=93 | ||
|TSSclassifier=NA | |||
|UniProt=B7ZN95,Q01815,Q0PCR6,Q5S8D1 | |UniProt=B7ZN95,Q01815,Q0PCR6,Q5S8D1 | ||
|association_with_transcript=-358bp_to_NM_001159533,NM_001159534,NM_001159535,NM_001256000,NM_001256001,NM_001256002,uc009dlt.2,uc012erl.1,uc012erm.1_5end | |association_with_transcript=-358bp_to_NM_001159533,NM_001159534,NM_001159535,NM_001256000,NM_001256001,NM_001256002,uc009dlt.2,uc012erl.1,uc012erm.1_5end | ||
|cluster_id=chr6:119058565..119058634,- | |||
|description=CAGE_peak_1_at_Cacna1c_5end | |description=CAGE_peak_1_at_Cacna1c_5end | ||
|id=chr6:119058565..119058634,- | |id=chr6:119058565..119058634,- | ||
|ontology_enrichment_celltype=CL:0000117!2.98e-07!23;CL:0000337!2.98e-07!23 | |ontology_enrichment_celltype=CL:0000117!2.98e-07!23;CL:0000337!2.98e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-07,23;CL:0000337,2.53e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.61e-15!71;UBERON:0003075!3.61e-15!71;UBERON:0007284!3.61e-15!71;UBERON:0000955!1.63e-14!50;UBERON:0006238!1.63e-14!50;UBERON:0001049!2.20e-14!52;UBERON:0005068!2.20e-14!52;UBERON:0006241!2.20e-14!52;UBERON:0007135!2.20e-14!52;UBERON:0002616!7.39e-14!49;UBERON:0001017!8.82e-14!73;UBERON:0005743!8.82e-14!73;UBERON:0004121!5.30e-13!102;UBERON:0000924!5.30e-13!102;UBERON:0006601!5.30e-13!102;UBERON:0000073!6.84e-13!75;UBERON:0001016!6.84e-13!75;UBERON:0000033!2.00e-12!63;UBERON:0002020!1.63e-11!34;UBERON:0003080!2.97e-11!40;UBERON:0002780!8.34e-11!39;UBERON:0001890!8.34e-11!39;UBERON:0006240!8.34e-11!39;UBERON:0000468!1.27e-10!333;UBERON:0003056!2.12e-10!49;UBERON:0002791!6.76e-10!29;UBERON:0003528!6.76e-10!29;UBERON:0001893!6.76e-10!29;UBERON:0004111!1.86e-08!122;UBERON:0000025!2.85e-08!114;UBERON:0000922!5.23e-08!328;UBERON:0005157!1.78e-07!27;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0002048!2.40e-07!14;UBERON:0000117!2.40e-07!14;UBERON:0000171!2.40e-07!14;UBERON:0000170!2.40e-07!14;UBERON:0005597!2.40e-07!14;UBERON:0000118!2.40e-07!14;UBERON:0000956!5.51e-07!21;UBERON:0001869!5.51e-07!21;UBERON:0000203!5.51e-07!21 | |ontology_enrichment_uberon=UBERON:0002346!3.61e-15!71;UBERON:0003075!3.61e-15!71;UBERON:0007284!3.61e-15!71;UBERON:0000955!1.63e-14!50;UBERON:0006238!1.63e-14!50;UBERON:0001049!2.20e-14!52;UBERON:0005068!2.20e-14!52;UBERON:0006241!2.20e-14!52;UBERON:0007135!2.20e-14!52;UBERON:0002616!7.39e-14!49;UBERON:0001017!8.82e-14!73;UBERON:0005743!8.82e-14!73;UBERON:0004121!5.30e-13!102;UBERON:0000924!5.30e-13!102;UBERON:0006601!5.30e-13!102;UBERON:0000073!6.84e-13!75;UBERON:0001016!6.84e-13!75;UBERON:0000033!2.00e-12!63;UBERON:0002020!1.63e-11!34;UBERON:0003080!2.97e-11!40;UBERON:0002780!8.34e-11!39;UBERON:0001890!8.34e-11!39;UBERON:0006240!8.34e-11!39;UBERON:0000468!1.27e-10!333;UBERON:0003056!2.12e-10!49;UBERON:0002791!6.76e-10!29;UBERON:0003528!6.76e-10!29;UBERON:0001893!6.76e-10!29;UBERON:0004111!1.86e-08!122;UBERON:0000025!2.85e-08!114;UBERON:0000922!5.23e-08!328;UBERON:0005157!1.78e-07!27;UBERON:0002021!2.00e-07!10;UBERON:0000411!2.00e-07!10;UBERON:0001950!2.00e-07!10;UBERON:0002048!2.40e-07!14;UBERON:0000117!2.40e-07!14;UBERON:0000171!2.40e-07!14;UBERON:0000170!2.40e-07!14;UBERON:0005597!2.40e-07!14;UBERON:0000118!2.40e-07!14;UBERON:0000956!5.51e-07!21;UBERON:0001869!5.51e-07!21;UBERON:0000203!5.51e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-15,54;UBERON:0001049,4.09e-14,52;UBERON:0005068,4.09e-14,52;UBERON:0006241,4.09e-14,52;UBERON:0007135,4.09e-14,52;UBERON:0001017,3.07e-13,73;UBERON:0000955,9.07e-13,47;UBERON:0006238,9.07e-13,47;UBERON:0002346,1.26e-12,64;UBERON:0003075,1.26e-12,64;UBERON:0007284,1.26e-12,64;UBERON:0001016,2.27e-12,75;UBERON:0002616,3.94e-12,46;UBERON:0002020,2.84e-11,34;UBERON:0010371,4.86e-11,73;UBERON:0003080,4.88e-11,40;UBERON:0010314,1.19e-10,92;UBERON:0002780,1.38e-10,39;UBERON:0001890,1.38e-10,39;UBERON:0006240,1.38e-10,39;UBERON:0004121,2.41e-10,95;UBERON:0000924,2.41e-10,95;UBERON:0006601,2.41e-10,95;UBERON:0003056,3.25e-10,49;UBERON:0003528,1.22e-09,29;UBERON:0002791,1.22e-09,29;UBERON:0001893,1.22e-09,29;UBERON:0004111,8.93e-08,122;UBERON:0000025,1.38e-07,114;UBERON:0002021,1.68e-07,10;UBERON:0000411,1.68e-07,10;UBERON:0001950,1.68e-07,10;UBERON:0002048,2.03e-07,14;UBERON:0000117,2.03e-07,14;UBERON:0000171,2.03e-07,14;UBERON:0000170,2.03e-07,14;UBERON:0005597,2.03e-07,14;UBERON:0000118,2.03e-07,14 | |||
|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.607425802169478,0,0,0.137114433605739,0,19.8150866051993,0,0.261199789138935,0,0,0,0,0.215471232685889,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,25.9347445029689,21.3905324873176,25.6965453026354,8.60630478782843,0.436050312760893,0.659058548203415,0.972149495371417,7.41928034614421,2.87505128729943,0,0,0,2.57259436035947,3.15186783932632,2.06268836910977,19.2200637816618,20.1016572123373,20.9164363157039,10.8430250262122,10.6715375533337,0.899899717281399,0.988866362566974,1.4209602298922,11.9840044207362,11.5265491596466,12.5464430893258,14.4456354014909,14.0917724105426,14.568200204594,21.4242484723065,12.7390431183552,10.6388472830242,11.9498442259303,27.5289702498472,36.5185786923637,33.0254046500923,21.761237475482,15.7358746996145,14.5855743755893,22.0554569211091,26.449842671489,28.1148775909331,27.6950870345248,20.9286370774681,20.3175395949578,1.06016670666458,1.73814588245607,8.40607017234866,1.72084775396277,0.679971333707751,0,0.649776417447669,0,3.08977724289854,1.70430322578058,0.259786004602869,0.70667914902068,1.83096445709685,10.2661181931454,12.7402619853323,21.3320010945999,0,0,0,2.51204535381932,4.40194402200192,94.2607583061637,7.98032503124225,17.0500667854799,14.9900073216438,19.4432206312883,29.0444106625191,31.0396480584298,0.494389935468748,10.9895511259133,1.76922110389975,6.47067399789637,6.62524555381181,5.81850303762267,9.31958806090611,69.0962680947251,73.0969006778958,5.8755122697976,0,0,0,28.9095934051308,42.0900554593136,30.1570445070875,38.7628234028777,44.7502050328078,40.7264567336738,44.6163473436334,7.94347038032467,5.22509276562391,0.758168275301024,4.20883711772948,7.93734702072493,6.20735681970377,7.74267158163002,10.5493372485001,12.1104968489364,8.32739181851524,9.18276900685342,11.1242449417777,18.5388473922244,30.8242910673545,34.6623714602979,13.1517439456545,31.141291913267,18.4573648256748,20.3724315043864,4.37875387000685,0,0,0,3.93538967817454,3.98694301967864,2.52086886045421,6.39210786080068,2.16440654922144,2.46827380619805,2.32533944750408,3.21928081679543,2.91913355917924,5.75959474697182,7.05920095540109,13.3763535750662,7.45619935869195,8.56245449635098,6.71032093801859,54.0445167809807,27.9900545671654,0.330418782983798,3.70230793328962,5.97207101498655,14.1664369834868,14.6908905907186,8.87407508342707,11.5636582799333,11.6037631928661,9.49058123089023,9.22314146454461,14.5774421104156,17.5081695396213,14.2323783596958,17.0775687644302,9.07779809473716,8.76221602319216,2.27601481143698,6.05517116831563,1.1270773567308,3.86937522906097,4.84881217919064,5.75113723100612,7.14572869504107,5.60918562322488,3.61097074035162,6.16985819609003,0.296452627087149,1.00107063429656,1.17935397067922,0.224862112384854,0,0.964708639009667,0.763877555344259,1.15078454980324,1.13494658742525,1.64736847912849,1.43768206527355,2.60498663367952,2.18426371180192,0.757736633841335,0.538192240565737,0.482443521363367,23.2789019609922,11.3694847062291,15.1557428091084,17.4837438348444,21.1221223459652,30.9886576267359,28.0891496245496,40.0023978108488,44.7683809261582,47.8363729641354,62.3468145450775,50.3060376177316,41.7897656115467,39.1998948755896,0,0,6.88469982226651,6.62248191131358,21.6743296483519,23.2079139452562,8.85248705034047,7.06918596172244,3.47059041357882,4.68526493155966,7.10897212518236,0.955875191810208,0.891194696329576,1.98153571552183,4.45291771842384,7.59865230569411,4.34816555741176,156.48348109742,28.8138372972785,3.73937767701236,14.6598263418218,74.566495583586,2.65490276679926,6.06951590387454,4.53485335447127,1.69744571780308,3.83892460745005,6.14870295887855,8.5281336745513,3.63533729477506,7.48644494607915,13.2735438333043,3.16255825724996,3.09406629744561,18.7241783164583,9.90336017172206,5.30370603509293,7.50179622610573,13.1231772895282,13.0209236849512,13.657568709976,8.82948352432338,1.40803024838226,4.44847348814022,7.27743713581374,6.10079135883476,10.9795810153216,5.85035371803112,3.58117032009409,5.25250879184196,11.3677526285642,17.0591277849669,1.53783792718067,2.88941615148511,2.77791791054568,1.88368457004691,1.23024804948923,1.60144721244566,0,0,0,1.90934123603023,6.01038387804157,14.4356821660063,15.9847904416266,14.4270924249983,13.9752040797554,28.3215127408123,31.3256597199023,22.7727669526106,16.3314866347659,3.10669656543463,0,1.79419855252775,1.98550188548517,4.27792614356905,2.71235629303235,3.21016638432478,4.45957506853865,8.07267186032491,7.7595914875026,1.93267296660805,2.30424005006292,0.632022241256357,4.25722952109345,2.87590680061516,0.77952493786677,1.79026695667481,0.79472541912506,0.721172697119813,0.590758108698309,0.807731599585181,0.609654453239999,0.504130925684203,0.877120926657772,0.384847366561318,0.467507608726276,7.48210265930198,0.665957860122194,0,0.335769232728157,53.8998967349811,31.3429734003474,40.6596605873329,17.3638387054043,9.02829787263654,45.1801474093653,42.8102469951675,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| ||
|short_description=p1@Cacna1c | |short_description=p1@Cacna1c | ||
}} | }} |
Latest revision as of 13:12, 26 September 2015
Short description: | p1@Cacna1c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna1c_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | -358bp_to_NM_001159533, NM_001159534, NM_001159535, NM_001256000, NM_001256001, NM_001256002, uc009dlt.2, uc012erl.1, uc012erm.1_5end |
EntrezGene: | Cacna1c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-07 | 23 |