FFCP PHASE1:Mm9::chr4:138010293..138010328,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66259 | |EntrezGene=66259 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6QWF9 | |UniProt=Q6QWF9 | ||
|association_with_transcript=64bp_to_ENSMUST00000050918_5end | |association_with_transcript=64bp_to_ENSMUST00000050918_5end | ||
|cluster_id=chr4:138010293..138010328,+ | |||
|description=CAGE_peak_1_at_Camk2n1_5end | |description=CAGE_peak_1_at_Camk2n1_5end | ||
|id=chr4:138010293..138010328,+ | |id=chr4:138010293..138010328,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33 | |ontology_enrichment_celltype=CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.98e-08,33;CL:0000047,1.98e-08,33;CL:0000031,1.98e-08,33;CL:0000404,1.98e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.93e-19!73;UBERON:0005743!6.93e-19!73;UBERON:0004121!2.48e-18!102;UBERON:0000924!2.48e-18!102;UBERON:0006601!2.48e-18!102;UBERON:0000073!8.02e-18!75;UBERON:0001016!8.02e-18!75;UBERON:0002346!3.44e-15!71;UBERON:0003075!3.44e-15!71;UBERON:0007284!3.44e-15!71;UBERON:0000033!6.41e-15!63;UBERON:0001049!2.97e-13!52;UBERON:0005068!2.97e-13!52;UBERON:0006241!2.97e-13!52;UBERON:0007135!2.97e-13!52;UBERON:0004111!1.01e-12!122;UBERON:0000955!1.13e-12!50;UBERON:0006238!1.13e-12!50;UBERON:0002616!4.23e-12!49;UBERON:0000468!1.28e-11!333;UBERON:0000025!1.46e-11!114;UBERON:0003056!6.70e-11!49;UBERON:0003080!1.96e-09!40;UBERON:0000922!5.62e-09!328;UBERON:0002780!6.35e-09!39;UBERON:0001890!6.35e-09!39;UBERON:0006240!6.35e-09!39;UBERON:0002020!1.35e-08!34;UBERON:0002021!3.87e-08!10;UBERON:0000411!3.87e-08!10;UBERON:0001950!3.87e-08!10;UBERON:0005177!3.17e-07!85;UBERON:0000480!4.28e-07!308;UBERON:0000467!4.28e-07!308;UBERON:0000475!5.40e-07!200;UBERON:0000479!5.90e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.01e-19,95;UBERON:0000924,4.01e-19,95;UBERON:0006601,4.01e-19,95;UBERON:0001017,6.63e-19,73;UBERON:0001016,7.69e-18,75;UBERON:0002346,2.51e-16,64;UBERON:0003075,2.51e-16,64;UBERON:0007284,2.51e-16,64;UBERON:0010371,5.94e-15,73;UBERON:0000073,2.30e-14,54;UBERON:0001049,2.88e-13,52;UBERON:0005068,2.88e-13,52;UBERON:0006241,2.88e-13,52;UBERON:0007135,2.88e-13,52;UBERON:0004111,1.14e-12,122;UBERON:0011216,6.52e-12,194;UBERON:0000025,1.64e-11,114;UBERON:0000955,4.38e-11,47;UBERON:0006238,4.38e-11,47;UBERON:0003056,6.54e-11,49;UBERON:0002616,1.55e-10,46;UBERON:0010314,1.63e-10,92;UBERON:0003080,1.92e-09,40;UBERON:0002780,6.23e-09,39;UBERON:0001890,6.23e-09,39;UBERON:0006240,6.23e-09,39;UBERON:0002020,1.33e-08,34;UBERON:0002021,3.81e-08,10;UBERON:0000411,3.81e-08,10;UBERON:0001950,3.81e-08,10;UBERON:0000922,2.22e-07,320;UBERON:0000479,6.35e-07,349 | |||
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| ||
|short_description=p1@Camk2n1 | |short_description=p1@Camk2n1 | ||
}} | }} |
Latest revision as of 14:12, 26 September 2015
Short description: | p1@Camk2n1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Camk2n1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 64bp_to_ENSMUST00000050918_5end |
EntrezGene: | Camk2n1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.98e-08 | 33 |
neuronal stem cell | 1.98e-08 | 33 |
neuroblast | 1.98e-08 | 33 |
electrically signaling cell | 1.98e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.01e-19 | 95 |
ectoderm | 4.01e-19 | 95 |
presumptive ectoderm | 4.01e-19 | 95 |
central nervous system | 6.63e-19 | 73 |
nervous system | 7.69e-18 | 75 |
neurectoderm | 2.51e-16 | 64 |
neural plate | 2.51e-16 | 64 |
presumptive neural plate | 2.51e-16 | 64 |
ecto-epithelium | 5.94e-15 | 73 |
regional part of nervous system | 2.30e-14 | 54 |
neural tube | 2.88e-13 | 52 |
neural rod | 2.88e-13 | 52 |
future spinal cord | 2.88e-13 | 52 |
neural keel | 2.88e-13 | 52 |
anatomical conduit | 1.14e-12 | 122 |
organ system subdivision | 6.52e-12 | 194 |
tube | 1.64e-11 | 114 |
brain | 4.38e-11 | 47 |
future brain | 4.38e-11 | 47 |
pre-chordal neural plate | 6.54e-11 | 49 |
regional part of brain | 1.55e-10 | 46 |
structure with developmental contribution from neural crest | 1.63e-10 | 92 |
anterior neural tube | 1.92e-09 | 40 |
regional part of forebrain | 6.23e-09 | 39 |
forebrain | 6.23e-09 | 39 |
future forebrain | 6.23e-09 | 39 |
gray matter | 1.33e-08 | 34 |
occipital lobe | 3.81e-08 | 10 |
visual cortex | 3.81e-08 | 10 |
neocortex | 3.81e-08 | 10 |
embryo | 2.22e-07 | 320 |
tissue | 6.35e-07 | 349 |