FFCP PHASE1:Mm9::chr15:103045716..103045792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12419 | |EntrezGene=12419 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=399 | |||
|TSSclassifier=NA | |||
|UniProt=Q61686 | |UniProt=Q61686 | ||
|association_with_transcript=0bp_to_ENSMUST00000108813,ENSMUST00000122182,NM_001110216,NM_007626,uc007xxl.1,uc007xxm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000108813,ENSMUST00000122182,NM_001110216,NM_007626,uc007xxl.1,uc007xxm.1_5end | ||
|cluster_id=chr15:103045716..103045792,- | |||
|description=CAGE_peak_2_at_Cbx5_5end | |description=CAGE_peak_2_at_Cbx5_5end | ||
|id=chr15:103045716..103045792,- | |id=chr15:103045716..103045792,- | ||
|ontology_enrichment_celltype=CL:0000540!9.60e-07!33;CL:0000047!9.60e-07!33;CL:0000031!9.60e-07!33;CL:0000404!9.60e-07!33 | |ontology_enrichment_celltype=CL:0000540!9.60e-07!33;CL:0000047!9.60e-07!33;CL:0000031!9.60e-07!33;CL:0000404!9.60e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.27e-07,33;CL:0000047,9.27e-07,33;CL:0000031,9.27e-07,33;CL:0000404,9.27e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.37e-17!73;UBERON:0005743!3.37e-17!73;UBERON:0000955!1.63e-16!50;UBERON:0006238!1.63e-16!50;UBERON:0000033!1.83e-16!63;UBERON:0000073!1.98e-16!75;UBERON:0001016!1.98e-16!75;UBERON:0002616!3.89e-16!49;UBERON:0003056!4.02e-16!49;UBERON:0003080!5.63e-16!40;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0001049!3.01e-15!52;UBERON:0005068!3.01e-15!52;UBERON:0006241!3.01e-15!52;UBERON:0007135!3.01e-15!52;UBERON:0002346!7.44e-15!71;UBERON:0003075!7.44e-15!71;UBERON:0007284!7.44e-15!71;UBERON:0004121!3.31e-13!102;UBERON:0000924!3.31e-13!102;UBERON:0006601!3.31e-13!102;UBERON:0000025!1.44e-10!114;UBERON:0002020!3.97e-10!34;UBERON:0002791!4.41e-10!29;UBERON:0003528!4.41e-10!29;UBERON:0001893!4.41e-10!29;UBERON:0000153!1.02e-09!94;UBERON:0004111!1.24e-09!122;UBERON:0000468!4.20e-09!333;UBERON:0007811!2.53e-08!86;UBERON:0000922!2.47e-07!328;UBERON:0000956!5.02e-07!21;UBERON:0001869!5.02e-07!21;UBERON:0000203!5.02e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.24e-19,92;UBERON:0001017,3.03e-17,73;UBERON:0001016,1.79e-16,75;UBERON:0000073,2.56e-16,54;UBERON:0003056,3.65e-16,49;UBERON:0003080,5.11e-16,40;UBERON:0002346,1.22e-15,64;UBERON:0003075,1.22e-15,64;UBERON:0007284,1.22e-15,64;UBERON:0002780,1.82e-15,39;UBERON:0001890,1.82e-15,39;UBERON:0006240,1.82e-15,39;UBERON:0001049,2.75e-15,52;UBERON:0005068,2.75e-15,52;UBERON:0006241,2.75e-15,52;UBERON:0007135,2.75e-15,52;UBERON:0000955,2.94e-15,47;UBERON:0006238,2.94e-15,47;UBERON:0002616,6.94e-15,46;UBERON:0004121,1.70e-13,95;UBERON:0000924,1.70e-13,95;UBERON:0006601,1.70e-13,95;UBERON:0010371,5.03e-13,73;UBERON:0000025,1.64e-10,114;UBERON:0002020,3.74e-10,34;UBERON:0003528,4.16e-10,29;UBERON:0002791,4.16e-10,29;UBERON:0001893,4.16e-10,29;UBERON:0004111,1.40e-09,122;UBERON:0000956,4.84e-07,21;UBERON:0001869,4.84e-07,21;UBERON:0000203,4.84e-07,21;UBERON:0000922,5.76e-07,320 | |||
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| ||
|short_description=p2@Cbx5 | |short_description=p2@Cbx5 | ||
}} | }} |
Latest revision as of 14:53, 26 September 2015
Short description: | p2@Cbx5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cbx5_5end |
Coexpression cluster: | MCL_coexpression_mm9:399 |
Association with transcript: | 0bp_to_ENSMUST00000108813, ENSMUST00000122182, NM_001110216, NM_007626, uc007xxl.1, uc007xxm.1_5end |
EntrezGene: | Cbx5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.27e-07 | 33 |
neuronal stem cell | 9.27e-07 | 33 |
neuroblast | 9.27e-07 | 33 |
electrically signaling cell | 9.27e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.24e-19 | 92 |
central nervous system | 3.03e-17 | 73 |
nervous system | 1.79e-16 | 75 |
regional part of nervous system | 2.56e-16 | 54 |
pre-chordal neural plate | 3.65e-16 | 49 |
anterior neural tube | 5.11e-16 | 40 |
neurectoderm | 1.22e-15 | 64 |
neural plate | 1.22e-15 | 64 |
presumptive neural plate | 1.22e-15 | 64 |
regional part of forebrain | 1.82e-15 | 39 |
forebrain | 1.82e-15 | 39 |
future forebrain | 1.82e-15 | 39 |
neural tube | 2.75e-15 | 52 |
neural rod | 2.75e-15 | 52 |
future spinal cord | 2.75e-15 | 52 |
neural keel | 2.75e-15 | 52 |
brain | 2.94e-15 | 47 |
future brain | 2.94e-15 | 47 |
regional part of brain | 6.94e-15 | 46 |
ectoderm-derived structure | 1.70e-13 | 95 |
ectoderm | 1.70e-13 | 95 |
presumptive ectoderm | 1.70e-13 | 95 |
ecto-epithelium | 5.03e-13 | 73 |
tube | 1.64e-10 | 114 |
gray matter | 3.74e-10 | 34 |
brain grey matter | 4.16e-10 | 29 |
regional part of telencephalon | 4.16e-10 | 29 |
telencephalon | 4.16e-10 | 29 |
anatomical conduit | 1.40e-09 | 122 |
cerebral cortex | 4.84e-07 | 21 |
cerebral hemisphere | 4.84e-07 | 21 |
pallium | 4.84e-07 | 21 |
embryo | 5.76e-07 | 320 |