FFCP PHASE1:Mm9::chr9:40965754..40965803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72828 | |EntrezGene=72828 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=D3YVT5 | |UniProt=D3YVT5 | ||
|association_with_transcript=-169bp_to_ENSMUST00000136530_5end | |association_with_transcript=-169bp_to_ENSMUST00000136530_5end | ||
|cluster_id=chr9:40965754..40965803,- | |||
|description=CAGE_peak_1_at_Ubash3b_5end | |description=CAGE_peak_1_at_Ubash3b_5end | ||
|id=chr9:40965754..40965803,- | |id=chr9:40965754..40965803,- | ||
|ontology_enrichment_celltype=CL:0000117!7.75e-11!23;CL:0000337!7.75e-11!23;CL:0000540!1.64e-07!33;CL:0000047!1.64e-07!33;CL:0000031!1.64e-07!33;CL:0000404!1.64e-07!33;CL:0000221!5.62e-07!44;CL:0000133!5.62e-07!44 | |ontology_enrichment_celltype=CL:0000117!7.75e-11!23;CL:0000337!7.75e-11!23;CL:0000540!1.64e-07!33;CL:0000047!1.64e-07!33;CL:0000031!1.64e-07!33;CL:0000404!1.64e-07!33;CL:0000221!5.62e-07!44;CL:0000133!5.62e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.79e-11,23;CL:0000337,6.79e-11,23;CL:0000034,1.06e-07,97;CL:0000540,1.18e-07,33;CL:0000047,1.18e-07,33;CL:0000031,1.18e-07,33;CL:0000404,1.18e-07,33;CL:0000221,4.51e-07,44;CL:0000133,4.51e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.89e-12!75;UBERON:0001016!1.89e-12!75;UBERON:0001017!2.46e-11!73;UBERON:0005743!2.46e-11!73;UBERON:0001049!2.84e-10!52;UBERON:0005068!2.84e-10!52;UBERON:0006241!2.84e-10!52;UBERON:0007135!2.84e-10!52;UBERON:0000955!1.72e-09!50;UBERON:0006238!1.72e-09!50;UBERON:0002616!5.72e-09!49;UBERON:0002020!3.31e-08!34;UBERON:0000033!1.34e-07!63;UBERON:0004121!2.04e-07!102;UBERON:0000924!2.04e-07!102;UBERON:0006601!2.04e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.33e-12,75;UBERON:0001017,1.85e-11,73;UBERON:0000073,4.21e-11,54;UBERON:0001049,3.92e-10,52;UBERON:0005068,3.92e-10,52;UBERON:0006241,3.92e-10,52;UBERON:0007135,3.92e-10,52;UBERON:0002020,3.31e-08,34;UBERON:0004121,3.39e-08,95;UBERON:0000924,3.39e-08,95;UBERON:0006601,3.39e-08,95;UBERON:0000955,5.67e-08,47;UBERON:0006238,5.67e-08,47;UBERON:0002346,1.58e-07,64;UBERON:0003075,1.58e-07,64;UBERON:0007284,1.58e-07,64;UBERON:0002616,1.81e-07,46 | |||
|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.700837921786577,2.32421982194837,59.553629470155,33.4712272640451,22.2583358693156,7.8974437405383,1.36960583944965,2.62261207256992,1.66554880907831,1.61980213911861,1.39912375625629,1.10411757875383,1.37114433605739,0,3.48677489619386,1.19149141441062,0.522399578277871,0.319984845586813,0.91763712426868,1.72269589234506,0,1.29282739611533,0,0,0.443461021310609,8.25539875497521,13.5314253268605,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,2.09409497589519,2.35292595212406,0.683045484958446,0.485510353031154,0,0.101376931219515,0,1.56478268869608,0.872100625521786,0.659058548203415,0.194429899074283,0.699932108126813,0,0.335565212115473,5.07753499407941,0.336093799142464,7.46052364504246,1.14613375975503,1.54701627683233,3.84401275633236,6.34789175126439,4.43681982454325,0.338844532069132,1.77858959222228,13.9484456178617,14.8329954385046,14.209602298922,8.68840320503374,8.06858441175265,3.42175720617976,5.67024940993101,2.73422449756797,5.42736870367227,5.52171352379034,3.30725157880376,3.73797336971122,0.919218786610021,7.70811166995721,5.49055553766307,7.52672012955593,9.49581271657396,10.8870295886867,8.85552729946492,10.8881369610539,3.93933827022176,6.41752640662602,7.95497180778903,5.41012387036591,6.15118171223492,41.8765849132508,22.5203249118221,4.92769630792852,2.58127163094416,0,0,0,0,2.10666630197628,0.170430322578058,0,0,4.08445917352373,0,0,0,1.08245520505607,1.77351905832569,1.51657333504435,2.2836775943812,3.6251303710604,0.593768556259299,1.04091196059682,1.21786191324856,1.15307748628029,1.3565037649736,1.17588707135705,0.628332956648377,0.988779870937496,0.722996784599558,5.30766331169925,1.7794353494215,2.87093973998512,1.93950101254089,0,15.2246014446005,20.1068838540917,0.510914110417183,3.71426885968353,1.19980546198682,2.03312363316904,3.59497534571574,2.74500361691176,2.51308704225729,2.78118912307642,2.81287003063364,8.3115217823824,4.05603157669394,1.32391173005411,3.23458123586242,0,0.420883711772948,0.650602214813519,4.59804208866946,0.900310649026746,2.10986744970001,1.29269348387523,1.40925092313335,1.78033276663485,1.55222022443409,1.5089759505299,0.945530400839096,1.40760899331159,1.7535658594206,1.66828349535359,2.78601733217733,1.23469281844766,2.18937693500343,1.40442637462647,2.05878325691772,2.55747149456033,3.52113813310353,1.40715635988658,2.52086886045421,1.89395788468168,1.77087808572663,0.925602677324269,0.697601834251224,2.68273401399619,0.934122738937356,0.987359099480883,0.32833492815819,0.648550476366846,0.877199924551994,0.878200461164203,0.671032093801859,3.99550902271842,4.52780294468852,0.991256348951394,0,1.2797295032114,1.62565670302307,1.03093969057675,0.403367049246685,1.55664630691409,1.52180500890047,1.42358718463353,1.31759163779209,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,1.13800740571849,1.25673363870702,3.38123207019241,1.01825663922657,0.775809948670503,1.1221731182451,0.822074982615345,1.03327103585722,1.8839847340965,1.72756029490521,0,4.50481785433454,3.73462090715086,3.59779379815766,3.24576194221605,3.13530307678142,1.78238096246994,2.87696137450811,4.21551589615092,1.92192989231657,5.75072826109418,1.11642284300551,0.624075346229121,0,0.358794827043824,0,2.77129785249907,0.757965647081939,1.30371981153621,0.509235257325564,1.40814148973101,1.17254380209271,0.714130922658041,2.53673742215138,2.04925687338048,1.10732344824387,2.87018583583477,1.63863314715738,1.72684981865896,0.433947175744535,7.53956419696361,5.4390568381871,0,0.827810238914197,8.0275294993896,4.92289083687253,0,0.757412781613119,0.315508219416257,1.17131623288992,0.430846795465598,1.43381278771531,3.7875774594007,3.67999490025482,0.404810701674894,0.584511715822624,3.16230222357219,14.7807805554031,1.98716119291576,0.35613120733451,0.977321756121456,0.989820737835213,1.32745138339963,0.971122544619926,0,0.565815239267694,0,0.307435147943927,2.06742634534577,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0.720244376125241,1.03486947026204,1.50035924522115,2.30542303734956,2.31879462882692,2.96188237083818,2.13125464380219,3.98941903708308,0.42366414172764,1.10264199027481,1.81374878235628,1.61464426695906,0.965006798850494,0.596861720015682,0.820704498725306,0,6.67531087237835,3.07567585436135,1.44470807574256,1.11116716421827,2.63715839806567,1.50363650493128,3.20289442489132,2.88963330989554,4.05859211738608,2.9021994498929,0.954670618015114,2.05618395827738,1.01659733563424,0.648032044930808,0.418176592028937,0.436725127492355,1.07891477107857,0.743881101528023,1.30877970992015,0.777689839750757,0,1.12738587736838,0.897099276263873,1.82004339502807,1.55560950675238,1.29159823477731,0.506868376472335,1.17357238645754,1.5624526181274,0.209718688851422,0.966336483304024,0.864090018773596,0.632022241256357,1.21635129174099,0.821687657318618,0.77952493786677,1.074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|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.700837921786577,2.32421982194837,59.553629470155,33.4712272640451,22.2583358693156,7.8974437405383,1.36960583944965,2.62261207256992,1.66554880907831,1.61980213911861,1.39912375625629,1.10411757875383,1.37114433605739,0,3.48677489619386,1.19149141441062,0.522399578277871,0.319984845586813,0.91763712426868,1.72269589234506,0,1.29282739611533,0,0,0.443461021310609,8.25539875497521,13.5314253268605,0,0,0,0.204169356262369,2.09265815368454,2.3440060335714,2.09409497589519,2.35292595212406,0.683045484958446,0.485510353031154,0,0.101376931219515,0,1.56478268869608,0.872100625521786,0.659058548203415,0.194429899074283,0.699932108126813,0,0.335565212115473,5.07753499407941,0.336093799142464,7.46052364504246,1.14613375975503,1.54701627683233,3.84401275633236,6.34789175126439,4.43681982454325,0.338844532069132,1.77858959222228,13.9484456178617,14.8329954385046,14.209602298922,8.68840320503374,8.06858441175265,3.42175720617976,5.67024940993101,2.73422449756797,5.42736870367227,5.52171352379034,3.30725157880376,3.73797336971122,0.919218786610021,7.70811166995721,5.49055553766307,7.52672012955593,9.49581271657396,10.8870295886867,8.85552729946492,10.8881369610539,3.93933827022176,6.41752640662602,7.95497180778903,5.41012387036591,6.15118171223492,41.8765849132508,22.5203249118221,4.92769630792852,2.58127163094416,0,0,0,0,2.10666630197628,0.170430322578058,0,0,4.08445917352373,0,0,0,1.08245520505607,1.77351905832569,1.51657333504435,2.2836775943812,3.6251303710604,0.593768556259299,1.04091196059682,1.21786191324856,1.15307748628029,1.3565037649736,1.17588707135705,0.628332956648377,0.988779870937496,0.722996784599558,5.30766331169925,1.7794353494215,2.87093973998512,1.93950101254089,0,15.2246014446005,20.1068838540917,0.510914110417183,3.71426885968353,1.19980546198682,2.03312363316904,3.59497534571574,2.74500361691176,2.51308704225729,2.78118912307642,2.81287003063364,8.3115217823824,4.05603157669394,1.32391173005411,3.23458123586242,0,0.420883711772948,0.650602214813519,4.59804208866946,0.900310649026746,2.10986744970001,1.29269348387523,1.40925092313335,1.78033276663485,1.55222022443409,1.5089759505299,0.945530400839096,1.40760899331159,1.7535658594206,1.66828349535359,2.78601733217733,1.23469281844766,2.18937693500343,1.40442637462647,2.05878325691772,2.55747149456033,3.52113813310353,1.40715635988658,2.52086886045421,1.89395788468168,1.77087808572663,0.925602677324269,0.697601834251224,2.68273401399619,0.934122738937356,0.987359099480883,0.32833492815819,0.648550476366846,0.877199924551994,0.878200461164203,0.671032093801859,3.99550902271842,4.52780294468852,0.991256348951394,0,1.2797295032114,1.62565670302307,1.03093969057675,0.403367049246685,1.55664630691409,1.52180500890047,1.42358718463353,1.31759163779209,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0.648414149624083,0.199141273254367,1.13800740571849,1.25673363870702,3.38123207019241,1.01825663922657,0.775809948670503,1.1221731182451,0.822074982615345,1.03327103585722,1.8839847340965,1.72756029490521,0,4.50481785433454,3.73462090715086,3.59779379815766,3.24576194221605,3.13530307678142,1.78238096246994,2.87696137450811,4.21551589615092,1.92192989231657,5.75072826109418,1.11642284300551,0.624075346229121,0,0.358794827043824,0,2.77129785249907,0.757965647081939,1.30371981153621,0.509235257325564,1.40814148973101,1.17254380209271,0.714130922658041,2.53673742215138,2.04925687338048,1.10732344824387,2.87018583583477,1.63863314715738,1.72684981865896,0.433947175744535,7.53956419696361,5.4390568381871,0,0.827810238914197,8.0275294993896,4.92289083687253,0,0.757412781613119,0.315508219416257,1.17131623288992,0.430846795465598,1.43381278771531,3.7875774594007,3.67999490025482,0.404810701674894,0.584511715822624,3.16230222357219,14.7807805554031,1.98716119291576,0.35613120733451,0.977321756121456,0.989820737835213,1.32745138339963,0.971122544619926,0,0.565815239267694,0,0.307435147943927,2.06742634534577,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0.720244376125241,1.03486947026204,1.50035924522115,2.30542303734956,2.31879462882692,2.96188237083818,2.13125464380219,3.98941903708308,0.42366414172764,1.10264199027481,1.81374878235628,1.61464426695906,0.965006798850494,0.596861720015682,0.820704498725306,0,6.67531087237835,3.07567585436135,1.44470807574256,1.11116716421827,2.63715839806567,1.50363650493128,3.20289442489132,2.88963330989554,4.05859211738608,2.9021994498929,0.954670618015114,2.05618395827738,1.01659733563424,0.648032044930808,0.418176592028937,0.436725127492355,1.07891477107857,0.743881101528023,1.30877970992015,0.777689839750757,0,1.12738587736838,0.897099276263873,1.82004339502807,1.55560950675238,1.29159823477731,0.506868376472335,1.17357238645754,1.5624526181274,0.209718688851422,0.966336483304024,0.864090018773596,0.632022241256357,1.21635129174099,0.821687657318618,0.77952493786677,1.074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| ||
|short_description=p1@Ubash3b | |short_description=p1@Ubash3b | ||
}} | }} |
Latest revision as of 15:35, 26 September 2015
Short description: | p1@Ubash3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ubash3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -169bp_to_ENSMUST00000136530_5end |
EntrezGene: | Ubash3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.79e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.79e-11 | 23 |
stem cell | 1.06e-07 | 97 |
neuron | 1.18e-07 | 33 |
neuronal stem cell | 1.18e-07 | 33 |
neuroblast | 1.18e-07 | 33 |
electrically signaling cell | 1.18e-07 | 33 |
ectodermal cell | 4.51e-07 | 44 |
neurectodermal cell | 4.51e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.33e-12 | 75 |
central nervous system | 1.85e-11 | 73 |
regional part of nervous system | 4.21e-11 | 54 |
neural tube | 3.92e-10 | 52 |
neural rod | 3.92e-10 | 52 |
future spinal cord | 3.92e-10 | 52 |
neural keel | 3.92e-10 | 52 |
gray matter | 3.31e-08 | 34 |
ectoderm-derived structure | 3.39e-08 | 95 |
ectoderm | 3.39e-08 | 95 |
presumptive ectoderm | 3.39e-08 | 95 |
brain | 5.67e-08 | 47 |
future brain | 5.67e-08 | 47 |
neurectoderm | 1.58e-07 | 64 |
neural plate | 1.58e-07 | 64 |
presumptive neural plate | 1.58e-07 | 64 |
regional part of brain | 1.81e-07 | 46 |