FFCP PHASE1:Mm9::chr7:31840613..31840678,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56188 | |EntrezGene=56188 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z239 | |UniProt=Q9Z239 | ||
|association_with_transcript=0bp_to_ENSMUST00000039909,ENSMUST00000108110,NM_019503,NM_052992,uc009ghw.2,uc009ghx.2,uc009ghy.2_5end | |association_with_transcript=0bp_to_ENSMUST00000039909,ENSMUST00000108110,NM_019503,NM_052992,uc009ghw.2,uc009ghx.2,uc009ghy.2_5end | ||
|cluster_id=chr7:31840613..31840678,- | |||
|description=CAGE_peak_1_at_Fxyd1_5end | |description=CAGE_peak_1_at_Fxyd1_5end | ||
|id=chr7:31840613..31840678,- | |id=chr7:31840613..31840678,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.38e-14!47;UBERON:0004111!1.41e-09!122;UBERON:0002107!1.77e-09!22;UBERON:0007499!1.77e-09!22;UBERON:0006925!1.77e-09!22;UBERON:0009497!1.77e-09!22;UBERON:0000015!1.77e-09!22;UBERON:0002423!1.77e-09!22;UBERON:0006235!1.77e-09!22;UBERON:0008835!1.77e-09!22;UBERON:0003894!1.77e-09!22;UBERON:0004161!1.77e-09!22;UBERON:0008836!1.77e-09!22;UBERON:0009854!4.62e-09!23;UBERON:0009856!4.62e-09!23;UBERON:0002365!1.00e-08!25;UBERON:0002330!1.00e-08!25;UBERON:0000025!3.15e-08!114;UBERON:0000468!5.20e-08!333;UBERON:0000466!3.89e-07!79;UBERON:0007100!9.16e-07!18;UBERON:0000948!9.16e-07!18;UBERON:0005498!9.16e-07!18;UBERON:0004140!9.16e-07!18;UBERON:0009881!9.16e-07!18;UBERON:0004141!9.16e-07!18;UBERON:0003084!9.16e-07!18;UBERON:0007005!9.16e-07!18;UBERON:0004139!9.16e-07!18;UBERON:0004291!9.16e-07!18;UBERON:0000479!9.30e-07!349 | |ontology_enrichment_uberon=UBERON:0003914!6.38e-14!47;UBERON:0004111!1.41e-09!122;UBERON:0002107!1.77e-09!22;UBERON:0007499!1.77e-09!22;UBERON:0006925!1.77e-09!22;UBERON:0009497!1.77e-09!22;UBERON:0000015!1.77e-09!22;UBERON:0002423!1.77e-09!22;UBERON:0006235!1.77e-09!22;UBERON:0008835!1.77e-09!22;UBERON:0003894!1.77e-09!22;UBERON:0004161!1.77e-09!22;UBERON:0008836!1.77e-09!22;UBERON:0009854!4.62e-09!23;UBERON:0009856!4.62e-09!23;UBERON:0002365!1.00e-08!25;UBERON:0002330!1.00e-08!25;UBERON:0000025!3.15e-08!114;UBERON:0000468!5.20e-08!333;UBERON:0000466!3.89e-07!79;UBERON:0007100!9.16e-07!18;UBERON:0000948!9.16e-07!18;UBERON:0005498!9.16e-07!18;UBERON:0004140!9.16e-07!18;UBERON:0009881!9.16e-07!18;UBERON:0004141!9.16e-07!18;UBERON:0003084!9.16e-07!18;UBERON:0007005!9.16e-07!18;UBERON:0004139!9.16e-07!18;UBERON:0004291!9.16e-07!18;UBERON:0000479!9.30e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.77e-14,47;UBERON:0002107,1.66e-09,22;UBERON:0007499,1.66e-09,22;UBERON:0006925,1.66e-09,22;UBERON:0009497,1.66e-09,22;UBERON:0000015,1.66e-09,22;UBERON:0002423,1.66e-09,22;UBERON:0006235,1.66e-09,22;UBERON:0008835,1.66e-09,22;UBERON:0003894,1.66e-09,22;UBERON:0004161,1.66e-09,22;UBERON:0008836,1.66e-09,22;UBERON:0004111,2.98e-09,122;UBERON:0009854,4.35e-09,23;UBERON:0009856,4.35e-09,23;UBERON:0002365,9.47e-09,25;UBERON:0002330,9.47e-09,25;UBERON:0000025,6.36e-08,114;UBERON:0007100,8.78e-07,18;UBERON:0000948,8.78e-07,18;UBERON:0005498,8.78e-07,18;UBERON:0004140,8.78e-07,18;UBERON:0009881,8.78e-07,18;UBERON:0004141,8.78e-07,18;UBERON:0003084,8.78e-07,18;UBERON:0007005,8.78e-07,18;UBERON:0004139,8.78e-07,18;UBERON:0004291,8.78e-07,18 | |||
|phase1_expression=42.75974217698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,44.8178139096138,26.9078477754399,30.5603753292554,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,8.43508680436368,6.58950052926845,1.65192076945513,68.0680469582794,25.7269684528927,51.6262529426009,44.3300169889366,14.6985742706631,10.062679505548,0.167782606057736,0,0,1.80081605225163,46.1318838301398,24.2365883370398,1.21389876515759,1.05798195854407,1.90149421051854,4.06613438482959,5.33576877666684,1.3498495759221,0.988866362566974,0,78.7948290663404,205.941011652353,0.207379224616955,0.270011876663381,0.420649922702764,26.8511925339575,27.6085676189517,1.34739879136449,2.1086003624012,1.83843757322004,23.1243350098716,35.6247673257674,36.0975353152172,0.527545150920775,0.640413505216868,2.6045668527838,52.2072208132582,69.7825636439283,54.0905797129908,18.8562294703147,18.0812034614861,3.35519002485541,1.8931548333296,14.434167980396,28.4067198927644,354.494637316331,392.343459549372,619.579264000214,682.9150147375,563.169797081351,249.148401313728,0.170430322578058,0,0.35333957451034,121.970401526605,0,5.09610479413291,0,0,0,0,199.022502350322,19.6792791571851,57.4471078180872,16.1341353892506,20.3991870469135,26.7513976817028,23.2112866451039,24.693628498498,59.1889645162771,2.47194967734374,231.937368499538,61.9227386364912,109.516157414396,156.576636588419,102.308678411532,18.6391761218122,42.7459963636859,30.9981126083913,19.1592791406444,0.359445373517761,0,0,50.9288173976397,38.4300506367646,4.77486538028885,34.9386883586476,13.2972037811772,52.1547991844496,25.471878301638,48.7810552843015,65.3136595702988,24.2613848096328,37.8795340595653,4.16385417480652,10.3455946995063,11.7040384373477,22.756427493193,19.9346942513391,24.2134931338366,23.6128345890517,44.4969797671107,3.66465587985832,6.80781888604149,11.4368230706567,25.4267049615987,30.8632446640414,46.6657903139703,38.4812595082854,22.0928036168527,0,0,0.284163499395593,40.3895256444229,57.4588846953686,75.9861899365483,97.3020863255214,105.662392448356,113.232060859336,117.662176043706,111.065188179442,110.810309906444,111.57157824134,163.018291830542,162.867238377624,176.755784797227,155.441481626064,154.605794411948,52.3621971924677,3.60166143327496,4.29544417878937,11.3713743665324,6.18535926552179,12.3085436086032,18.5569144303814,14.117846723634,14.2321948060717,16.5496294717926,16.1339880925134,17.1286912912971,17.8447998248191,23.4768637008558,26.3201517610812,12.5834717211591,17.5071820398502,16.5287256801125,13.0870851657626,9.25412952138803,6.76246414038483,11.4044743593376,12.8008641530633,10.7307804432187,11.8252324422361,16.8275568696746,13.9728867778824,11.9695249004147,671.761652979479,11.1786220829783,21.0318124771127,24.9596944747188,46.4549677979672,69.2178448489436,97.0124495287209,164.562190621864,110.089818980249,114.217547886242,99.2000625038746,232.960233240483,299.556166189978,377.352843652985,383.372272696326,443.848039654298,98.4734503588003,19.3281240005894,17.2742875028547,17.3139987490692,18.0711491182147,26.6334949332487,36.4206770555601,34.7337893186882,31.6846639653444,34.7699562748577,39.7042373957143,82.4232473020162,73.2184323111397,65.0920763616802,0,0,27.538799289066,43.322069169843,48.9679299462765,33.2881189921857,8.0328123234571,483.986767450783,64.0481685415001,72.2311676948781,71.735991445022,86.9846424547289,92.9070470923583,86.6214184213827,71.2466834947814,63.4195211667547,58.107303358139,57.1951943230817,130.442938306399,70.5139790522331,44.6310268628798,94.3629103402903,80.9745343873773,21.8502572539483,15.1161778482376,23.3870298897314,32.483208216885,31.0509499423367,14.7304127105886,29.8097658171555,43.1361827845513,55.9385061546394,27.4088382294997,39.191506434311,8.5109901438447,3.24109969256358,7.24408629183425,8.78781843629528,10.6404140185364,15.8748247665843,21.72047071948,25.5750557256263,3.05073220482823,2.1183207086382,33.2997881062992,95.7989129589999,44.402717341374,32.9911699357013,22.6807453605959,17.7272171724666,16.6144076879015,64.7134304016679,6.1513517087227,25.7983584954028,11.6672552242918,5.46268525313604,5.87785179200408,5.71945433016307,2.20971958992012,1.6794174278839,2.3493995546752,66.8269432610579,10.1227517945963,28.6680448648857,21.9250841868257,29.6905380340546,29.0422209782416,38.8409317588284,62.5686659840793,41.0956828914927,25.9229946583586,11.8054469486516,49.0412856655246,18.0915020713214,27.6315679063353,38.5013352921214,44.3018194528618,55.7555214119568,56.5661890272534,41.2747899955322,33.8695682495046,36.4792022447269,78.9202217146551,6.00421129193539,15.0016659314722,12.3253148597793,4.67714962720062,4.47566739168704,5.96044064343795,2.64429988943931,3.39685912501528,3.63479219813331,1.600342939755,1.41156659191577,2.33898913775406,0.769694733122636,1.28564592399726,218.114629037833,0,0,0,149.528745780915,132.503827668534,71.6122850885006,39.8725185087062,33.6053309703693,14.6835479080437,12.4287813856938,10.3121192419091,17.0134650520251,28.0883833105963,32.4819375877571,20.2506750069542,24.3173449741079,20.3914084042892,22.2636934053283,1.55681021376265,8.37952234142165,15.0245573063638,32.5763000871514,15.9306003597267,25.921934691452,59.1176295952297,65.9312183164461,65.7884379663221,69.4917332350443,65.9046179714623,63.3784507057216,73.9767909012071,64.6013787765131,65.0743863267098,60.4892987929504,49.8302601562879,52.8571264070552,57.6920261124629,60.2043583349685,74.0597585152497,57.5021611956253,57.224685587357,57.2664881531374,55.8068625862911,51.784140029706,53.4149680788496,57.6122668048876,54.050037310653,52.7473735358274,50.3012476846498,47.4791605050216,56.8831150005868,60.1154943801548,65.9740609555504,42.7176088273888,80.9403365221113,93.4689085110098,160.682198937828,183.752652126556,270.589764169032 | |phase1_expression=42.75974217698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.137114433605739,0,44.8178139096138,26.9078477754399,30.5603753292554,0.159992422793407,0,0,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,8.43508680436368,6.58950052926845,1.65192076945513,68.0680469582794,25.7269684528927,51.6262529426009,44.3300169889366,14.6985742706631,10.062679505548,0.167782606057736,0,0,1.80081605225163,46.1318838301398,24.2365883370398,1.21389876515759,1.05798195854407,1.90149421051854,4.06613438482959,5.33576877666684,1.3498495759221,0.988866362566974,0,78.7948290663404,205.941011652353,0.207379224616955,0.270011876663381,0.420649922702764,26.8511925339575,27.6085676189517,1.34739879136449,2.1086003624012,1.83843757322004,23.1243350098716,35.6247673257674,36.0975353152172,0.527545150920775,0.640413505216868,2.6045668527838,52.2072208132582,69.7825636439283,54.0905797129908,18.8562294703147,18.0812034614861,3.35519002485541,1.8931548333296,14.434167980396,28.4067198927644,354.494637316331,392.343459549372,619.579264000214,682.9150147375,563.169797081351,249.148401313728,0.170430322578058,0,0.35333957451034,121.970401526605,0,5.09610479413291,0,0,0,0,199.022502350322,19.6792791571851,57.4471078180872,16.1341353892506,20.3991870469135,26.7513976817028,23.2112866451039,24.693628498498,59.1889645162771,2.47194967734374,231.937368499538,61.9227386364912,109.516157414396,156.576636588419,102.308678411532,18.6391761218122,42.7459963636859,30.9981126083913,19.1592791406444,0.359445373517761,0,0,50.9288173976397,38.4300506367646,4.77486538028885,34.9386883586476,13.2972037811772,52.1547991844496,25.471878301638,48.7810552843015,65.3136595702988,24.2613848096328,37.8795340595653,4.16385417480652,10.3455946995063,11.7040384373477,22.756427493193,19.9346942513391,24.2134931338366,23.6128345890517,44.4969797671107,3.66465587985832,6.80781888604149,11.4368230706567,25.4267049615987,30.8632446640414,46.6657903139703,38.4812595082854,22.0928036168527,0,0,0.284163499395593,40.3895256444229,57.4588846953686,75.9861899365483,97.3020863255214,105.662392448356,113.232060859336,117.662176043706,111.065188179442,110.810309906444,111.57157824134,163.018291830542,162.867238377624,176.755784797227,155.441481626064,154.605794411948,52.3621971924677,3.60166143327496,4.29544417878937,11.3713743665324,6.18535926552179,12.3085436086032,18.5569144303814,14.117846723634,14.2321948060717,16.5496294717926,16.1339880925134,17.1286912912971,17.8447998248191,23.4768637008558,26.3201517610812,12.5834717211591,17.5071820398502,16.5287256801125,13.0870851657626,9.25412952138803,6.76246414038483,11.4044743593376,12.8008641530633,10.7307804432187,11.8252324422361,16.8275568696746,13.9728867778824,11.9695249004147,671.761652979479,11.1786220829783,21.0318124771127,24.9596944747188,46.4549677979672,69.2178448489436,97.0124495287209,164.562190621864,110.089818980249,114.217547886242,99.2000625038746,232.960233240483,299.556166189978,377.352843652985,383.372272696326,443.848039654298,98.4734503588003,19.3281240005894,17.2742875028547,17.3139987490692,18.0711491182147,26.6334949332487,36.4206770555601,34.7337893186882,31.6846639653444,34.7699562748577,39.7042373957143,82.4232473020162,73.2184323111397,65.0920763616802,0,0,27.538799289066,43.322069169843,48.9679299462765,33.2881189921857,8.0328123234571,483.986767450783,64.0481685415001,72.2311676948781,71.735991445022,86.9846424547289,92.9070470923583,86.6214184213827,71.2466834947814,63.4195211667547,58.107303358139,57.1951943230817,130.442938306399,70.5139790522331,44.6310268628798,94.3629103402903,80.9745343873773,21.8502572539483,15.1161778482376,23.3870298897314,32.483208216885,31.0509499423367,14.7304127105886,29.8097658171555,43.1361827845513,55.9385061546394,27.4088382294997,39.191506434311,8.5109901438447,3.24109969256358,7.24408629183425,8.78781843629528,10.6404140185364,15.8748247665843,21.72047071948,25.5750557256263,3.05073220482823,2.1183207086382,33.2997881062992,95.7989129589999,44.402717341374,32.9911699357013,22.6807453605959,17.7272171724666,16.6144076879015,64.7134304016679,6.1513517087227,25.7983584954028,11.6672552242918,5.46268525313604,5.87785179200408,5.71945433016307,2.20971958992012,1.6794174278839,2.3493995546752,66.8269432610579,10.1227517945963,28.6680448648857,21.9250841868257,29.6905380340546,29.0422209782416,38.8409317588284,62.5686659840793,41.0956828914927,25.9229946583586,11.8054469486516,49.0412856655246,18.0915020713214,27.6315679063353,38.5013352921214,44.3018194528618,55.7555214119568,56.5661890272534,41.2747899955322,33.8695682495046,36.4792022447269,78.9202217146551,6.00421129193539,15.0016659314722,12.3253148597793,4.67714962720062,4.47566739168704,5.96044064343795,2.64429988943931,3.39685912501528,3.63479219813331,1.600342939755,1.41156659191577,2.33898913775406,0.769694733122636,1.28564592399726,218.114629037833,0,0,0,149.528745780915,132.503827668534,71.6122850885006,39.8725185087062,33.6053309703693,14.6835479080437,12.4287813856938,10.3121192419091,17.0134650520251,28.0883833105963,32.4819375877571,20.2506750069542,24.3173449741079,20.3914084042892,22.2636934053283,1.55681021376265,8.37952234142165,15.0245573063638,32.5763000871514,15.9306003597267,25.921934691452,59.1176295952297,65.9312183164461,65.7884379663221,69.4917332350443,65.9046179714623,63.3784507057216,73.9767909012071,64.6013787765131,65.0743863267098,60.4892987929504,49.8302601562879,52.8571264070552,57.6920261124629,60.2043583349685,74.0597585152497,57.5021611956253,57.224685587357,57.2664881531374,55.8068625862911,51.784140029706,53.4149680788496,57.6122668048876,54.050037310653,52.7473735358274,50.3012476846498,47.4791605050216,56.8831150005868,60.1154943801548,65.9740609555504,42.7176088273888,80.9403365221113,93.4689085110098,160.682198937828,183.752652126556,270.589764169032 | ||
|short_description=p1@Fxyd1 | |short_description=p1@Fxyd1 | ||
}} | }} |
Latest revision as of 15:38, 26 September 2015
Short description: | p1@Fxyd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fxyd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000039909, ENSMUST00000108110, NM_019503, NM_052992, uc009ghw.2, uc009ghx.2, uc009ghy.2_5end |
EntrezGene: | Fxyd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 5.77e-14 | 47 |
liver | 1.66e-09 | 22 |
epithelial sac | 1.66e-09 | 22 |
digestive gland | 1.66e-09 | 22 |
epithelium of foregut-midgut junction | 1.66e-09 | 22 |
anatomical boundary | 1.66e-09 | 22 |
hepatobiliary system | 1.66e-09 | 22 |
foregut-midgut junction | 1.66e-09 | 22 |
hepatic diverticulum | 1.66e-09 | 22 |
liver primordium | 1.66e-09 | 22 |
septum transversum | 1.66e-09 | 22 |
liver bud | 1.66e-09 | 22 |
anatomical conduit | 2.98e-09 | 122 |
digestive tract diverticulum | 4.35e-09 | 23 |
sac | 4.35e-09 | 23 |
exocrine gland | 9.47e-09 | 25 |
exocrine system | 9.47e-09 | 25 |
tube | 6.36e-08 | 114 |
primary circulatory organ | 8.78e-07 | 18 |
heart | 8.78e-07 | 18 |
primitive heart tube | 8.78e-07 | 18 |
primary heart field | 8.78e-07 | 18 |
anterior lateral plate mesoderm | 8.78e-07 | 18 |
heart tube | 8.78e-07 | 18 |
heart primordium | 8.78e-07 | 18 |
cardiac mesoderm | 8.78e-07 | 18 |
cardiogenic plate | 8.78e-07 | 18 |
heart rudiment | 8.78e-07 | 18 |