FFCP PHASE1:Mm9::chr7:37483021..37483078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243931 | |EntrezGene=243931 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CGV9 | |UniProt=Q8CGV9 | ||
|association_with_transcript=-58bp_to_ENSMUST00000021641,NM_172298,uc009gkj.1_5end | |association_with_transcript=-58bp_to_ENSMUST00000021641,NM_172298,uc009gkj.1_5end | ||
|cluster_id=chr7:37483021..37483078,+ | |||
|description=CAGE_peak_1_at_Tshz3_5end | |description=CAGE_peak_1_at_Tshz3_5end | ||
|id=chr7:37483021..37483078,+ | |id=chr7:37483021..37483078,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.17e-08!34;UBERON:0001049!3.01e-08!52;UBERON:0005068!3.01e-08!52;UBERON:0006241!3.01e-08!52;UBERON:0007135!3.01e-08!52;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0002346!2.44e-07!71;UBERON:0003075!2.44e-07!71;UBERON:0007284!2.44e-07!71;UBERON:0001017!2.79e-07!73;UBERON:0005743!2.79e-07!73;UBERON:0000073!3.79e-07!75;UBERON:0001016!3.79e-07!75 | |ontology_enrichment_uberon=UBERON:0002020!2.17e-08!34;UBERON:0001049!3.01e-08!52;UBERON:0005068!3.01e-08!52;UBERON:0006241!3.01e-08!52;UBERON:0007135!3.01e-08!52;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0002346!2.44e-07!71;UBERON:0003075!2.44e-07!71;UBERON:0007284!2.44e-07!71;UBERON:0001017!2.79e-07!73;UBERON:0005743!2.79e-07!73;UBERON:0000073!3.79e-07!75;UBERON:0001016!3.79e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.57e-08,34;UBERON:0001049,8.70e-08,52;UBERON:0005068,8.70e-08,52;UBERON:0006241,8.70e-08,52;UBERON:0007135,8.70e-08,52;UBERON:0000956,1.46e-07,21;UBERON:0001869,1.46e-07,21;UBERON:0000203,1.46e-07,21;UBERON:0000073,3.26e-07,54;UBERON:0002346,3.96e-07,64;UBERON:0003075,3.96e-07,64;UBERON:0007284,3.96e-07,64;UBERON:0001017,8.93e-07,73 | |||
|phase1_expression=1.92178616525753,0,0.454999239389536,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0,0.159544317990673,0,0.524522414513984,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,2.04103896362567,5.75887516965135,4.4403964153619,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.10128051297009,3.9119567217402,0.872100625521786,0.659058548203415,0.58328969722285,2.2397827460058,0,0,0,0,2.82985379639542,4.87106847895886,1.03134418455488,4.45096213891115,1.5869729378161,2.53532561402472,2.03306719241479,0.889294796111139,0,0.988866362566974,0,1.49800055259202,0.768436610643109,9.53944433237994,9.58542162155004,10.3059231062177,5.99867067247988,5.30084498283872,3.67472397644862,4.02550978276593,2.75765635983006,2.20231761998777,1.27687338085188,2.15049146558741,2.63772575460388,3.11057988248193,2.08365348222704,0.558365998002762,0.56276261003168,1.22238598221448,7.07108605136802,7.54569908235246,14.5391567743734,1.13589289999776,2.56943304363071,8.11620568364698,3.44169550792555,0,0,0.649776417447669,0,0.842666520790511,3.40860645156115,3.89679006904303,3.88673531961374,2.95771181531029,2.56652954828636,2.54805239706646,28.4426681261332,0,0.253359865475099,0,0.79928715803342,1.29468941823586,1.92974780784272,2.60227990149204,2.13125834818499,1.38369298353635,1.80867168663147,2.58695155698551,1.13099932196708,1.73036477414062,1.44599356919912,0,3.07357014900077,2.87093973998512,0,0,4.68449275218475,1.8850203613211,0.510914110417183,0.239630249011841,0,0.127070227073065,0.449371918214468,1.83000241127451,2.63874139437015,3.82413504423008,4.09144731728529,1.87009240103604,1.78465389374533,9.77657892963036,1.7416975885413,0.252722758433675,0.631325567659422,3.77349284591841,1.60931473103431,2.88099407688559,3.46621081022145,2.31324097114515,1.2811372028485,1.96773621575431,1.03481348295606,2.80238390812695,4.72765200419548,1.40760899331159,2.84954452155847,4.17070873838397,2.43776516565517,3.08673204611915,8.95654200683219,0,0,0,2.07125772535502,3.04883877975425,0.720248245844059,2.60419209143731,0.983821158737019,1.07986979021165,0.465067889500816,1.60964040839772,1.28441876603886,3.12663714835613,1.47750717671186,1.94565142910054,1.46199987425332,1.97595103761946,1.20785776884335,2.10289948564127,5.35103984372279,0.330418782983798,0.528901133327089,8.31824177087412,5.10920678092965,5.15469845288373,4.84040459096022,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.01068167040216,1.1937388322469,0.974820435595601,0,0.216138049874694,0.398282546508734,3.41402221715547,3.65595240351132,3.38123207019241,2.44381593414377,0.969762435838129,1.75339549725796,2.02356918797623,0.442830443938806,1.255989822731,0.370191491765402,0,1.50160595144485,1.76903095601883,0.899448449539415,0.202860121388503,0.241177159752417,0.50925170356284,1.72617682470486,1.29708181420028,1.09824565275233,2.87536413054709,0.744281895337007,0.936113019343682,1.26289438973556,0.358794827043824,0,1.47802552133284,5.11626811780309,6.19266910479698,4.07388205860452,4.22442446919304,3.51763140627813,3.09456733151818,2.73187107000918,2.67979744980525,3.5434350343804,2.55127629851979,1.14704320301017,1.72684981865896,2.60368305446721,0,0,0.983528546038072,0.551873492609465,3.37156238974363,2.93029216480508,1.47541450839008,2.27223834483936,2.83957397474631,0.780877488593277,3.66219776145758,1.67278158566786,1.33679204449436,2.26461224631066,2.42886421004937,3.50707029493574,5.53402889125133,1.28528526568723,1.98716119291576,7.47875535402472,13.0309567482861,10.0631775013247,0,3.64170954232472,4.23252979750651,2.82907619633847,1.77181135728464,2.76691633149535,2.84271122485043,3.63533729477506,3.92147116223193,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,2.16073312837572,2.45781499187234,2.14337035031592,3.3694644392032,3.38900753443934,1.48094118541909,2.43571959291679,4.22409074514679,1.27099242518292,1.32317038832977,2.4732937941222,3.06782410722221,3.1362720962641,1.55184047204077,1.96969079694074,0.874442509889552,4.07935664423121,0.683483523191411,7.01715351074956,3.70389054739423,0.941842285023455,0.410082683163076,0,0.509935289981566,0.839708713941948,0.829199842826543,0.954670618015114,6.16855187483214,6.30290348093231,3.67218158794124,4.59994251231831,3.49380101993884,2.69728692769641,2.64491058321075,2.35580347785627,1.16653475962614,0,0,5.83114529571517,6.12196414691261,9.13920585217024,8.39538852605252,6.42033276864957,9.85800804624333,5.33837977860195,2.51662426621706,0.724752362478018,0,0,2.63542779877213,1.95150818613172,2.07873316764472,0.537080087002444,1.39076948346885,0.480781798079875,0,0.302899349844443,0.228620419965,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,1.81384306892169,1.10992976687032,0.62799699626633,0.335769232728157,2.12508553435409,6.94425159169373,6.41030684935428,2.78678892802786,0,5.64751842617067,4.14292712856459,10.3121192419091,6.70227411140382,5.48066015816514,8.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| |phase1_expression=1.92178616525753,0,0.454999239389536,0,0,0,0,0.129123323441576,0.140788722151667,0.70219357896598,0,0.159544317990673,0,0.524522414513984,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0,2.04103896362567,5.75887516965135,4.4403964153619,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.912392380975631,1.10128051297009,3.9119567217402,0.872100625521786,0.659058548203415,0.58328969722285,2.2397827460058,0,0,0,0,2.82985379639542,4.87106847895886,1.03134418455488,4.45096213891115,1.5869729378161,2.53532561402472,2.03306719241479,0.889294796111139,0,0.988866362566974,0,1.49800055259202,0.768436610643109,9.53944433237994,9.58542162155004,10.3059231062177,5.99867067247988,5.30084498283872,3.67472397644862,4.02550978276593,2.75765635983006,2.20231761998777,1.27687338085188,2.15049146558741,2.63772575460388,3.11057988248193,2.08365348222704,0.558365998002762,0.56276261003168,1.22238598221448,7.07108605136802,7.54569908235246,14.5391567743734,1.13589289999776,2.56943304363071,8.11620568364698,3.44169550792555,0,0,0.649776417447669,0,0.842666520790511,3.40860645156115,3.89679006904303,3.88673531961374,2.95771181531029,2.56652954828636,2.54805239706646,28.4426681261332,0,0.253359865475099,0,0.79928715803342,1.29468941823586,1.92974780784272,2.60227990149204,2.13125834818499,1.38369298353635,1.80867168663147,2.58695155698551,1.13099932196708,1.73036477414062,1.44599356919912,0,3.07357014900077,2.87093973998512,0,0,4.68449275218475,1.8850203613211,0.510914110417183,0.239630249011841,0,0.127070227073065,0.449371918214468,1.83000241127451,2.63874139437015,3.82413504423008,4.09144731728529,1.87009240103604,1.78465389374533,9.77657892963036,1.7416975885413,0.252722758433675,0.631325567659422,3.77349284591841,1.60931473103431,2.88099407688559,3.46621081022145,2.31324097114515,1.2811372028485,1.96773621575431,1.03481348295606,2.80238390812695,4.72765200419548,1.40760899331159,2.84954452155847,4.17070873838397,2.43776516565517,3.08673204611915,8.95654200683219,0,0,0,2.07125772535502,3.04883877975425,0.720248245844059,2.60419209143731,0.983821158737019,1.07986979021165,0.465067889500816,1.60964040839772,1.28441876603886,3.12663714835613,1.47750717671186,1.94565142910054,1.46199987425332,1.97595103761946,1.20785776884335,2.10289948564127,5.35103984372279,0.330418782983798,0.528901133327089,8.31824177087412,5.10920678092965,5.15469845288373,4.84040459096022,2.00140239460383,2.09248188723815,0.474529061544512,1.4822905925161,2.01068167040216,1.1937388322469,0.974820435595601,0,0.216138049874694,0.398282546508734,3.41402221715547,3.65595240351132,3.38123207019241,2.44381593414377,0.969762435838129,1.75339549725796,2.02356918797623,0.442830443938806,1.255989822731,0.370191491765402,0,1.50160595144485,1.76903095601883,0.899448449539415,0.202860121388503,0.241177159752417,0.50925170356284,1.72617682470486,1.29708181420028,1.09824565275233,2.87536413054709,0.744281895337007,0.936113019343682,1.26289438973556,0.358794827043824,0,1.47802552133284,5.11626811780309,6.19266910479698,4.07388205860452,4.22442446919304,3.51763140627813,3.09456733151818,2.73187107000918,2.67979744980525,3.5434350343804,2.55127629851979,1.14704320301017,1.72684981865896,2.60368305446721,0,0,0.983528546038072,0.551873492609465,3.37156238974363,2.93029216480508,1.47541450839008,2.27223834483936,2.83957397474631,0.780877488593277,3.66219776145758,1.67278158566786,1.33679204449436,2.26461224631066,2.42886421004937,3.50707029493574,5.53402889125133,1.28528526568723,1.98716119291576,7.47875535402472,13.0309567482861,10.0631775013247,0,3.64170954232472,4.23252979750651,2.82907619633847,1.77181135728464,2.76691633149535,2.84271122485043,3.63533729477506,3.92147116223193,0.948110273807448,1.05418608574999,1.03135543248187,2.04263763452273,2.16073312837572,2.45781499187234,2.14337035031592,3.3694644392032,3.38900753443934,1.48094118541909,2.43571959291679,4.22409074514679,1.27099242518292,1.32317038832977,2.4732937941222,3.06782410722221,3.1362720962641,1.55184047204077,1.96969079694074,0.874442509889552,4.07935664423121,0.683483523191411,7.01715351074956,3.70389054739423,0.941842285023455,0.410082683163076,0,0.509935289981566,0.839708713941948,0.829199842826543,0.954670618015114,6.16855187483214,6.30290348093231,3.67218158794124,4.59994251231831,3.49380101993884,2.69728692769641,2.64491058321075,2.35580347785627,1.16653475962614,0,0,5.83114529571517,6.12196414691261,9.13920585217024,8.39538852605252,6.42033276864957,9.85800804624333,5.33837977860195,2.51662426621706,0.724752362478018,0,0,2.63542779877213,1.95150818613172,2.07873316764472,0.537080087002444,1.39076948346885,0.480781798079875,0,0.302899349844443,0.228620419965,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,1.81384306892169,1.10992976687032,0.62799699626633,0.335769232728157,2.12508553435409,6.94425159169373,6.41030684935428,2.78678892802786,0,5.64751842617067,4.14292712856459,10.3121192419091,6.70227411140382,5.48066015816514,8.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| ||
|short_description=p1@Tshz3 | |short_description=p1@Tshz3 | ||
}} | }} |
Latest revision as of 17:04, 26 September 2015
Short description: | p1@Tshz3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tshz3_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENSMUST00000021641, NM_172298, uc009gkj.1_5end |
EntrezGene: | Tshz3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 4.57e-08 | 34 |
neural tube | 8.70e-08 | 52 |
neural rod | 8.70e-08 | 52 |
future spinal cord | 8.70e-08 | 52 |
neural keel | 8.70e-08 | 52 |
cerebral cortex | 1.46e-07 | 21 |
cerebral hemisphere | 1.46e-07 | 21 |
pallium | 1.46e-07 | 21 |
regional part of nervous system | 3.26e-07 | 54 |
neurectoderm | 3.96e-07 | 64 |
neural plate | 3.96e-07 | 64 |
presumptive neural plate | 3.96e-07 | 64 |
central nervous system | 8.93e-07 | 73 |