Personal tools

FFCP PHASE1:Mm9::chr11:101107361..101107372,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54409
|EntrezGene=54409
|HGNC=
|HGNC=
|MCL_coexpression_id=1937
|TSSclassifier=NA
|UniProt=Q9WUP0
|UniProt=Q9WUP0
|association_with_transcript=19bp_to_ENSMUST00000129680_5end
|association_with_transcript=19bp_to_ENSMUST00000129680_5end
|cluster_id=chr11:101107361..101107372,+
|description=CAGE_peak_3_at_Ramp2_5end
|description=CAGE_peak_3_at_Ramp2_5end
|id=chr11:101107361..101107372,+
|id=chr11:101107361..101107372,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000128,8.09e-07,6;CL:0000126,8.09e-07,6;CL:0000127,8.09e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!7.17e-09!14;UBERON:0000117!7.17e-09!14;UBERON:0000171!7.17e-09!14;UBERON:0000170!7.17e-09!14;UBERON:0005597!7.17e-09!14;UBERON:0000118!7.17e-09!14;UBERON:0007100!1.63e-08!18;UBERON:0000948!1.63e-08!18;UBERON:0005498!1.63e-08!18;UBERON:0004140!1.63e-08!18;UBERON:0009881!1.63e-08!18;UBERON:0004141!1.63e-08!18;UBERON:0003084!1.63e-08!18;UBERON:0007005!1.63e-08!18;UBERON:0004139!1.63e-08!18;UBERON:0004291!1.63e-08!18;UBERON:0004535!7.53e-08!23;UBERON:0001009!7.53e-08!23;UBERON:0004872!8.50e-08!33;UBERON:0005153!1.64e-07!17
|ontology_enrichment_uberon=UBERON:0002048!7.17e-09!14;UBERON:0000117!7.17e-09!14;UBERON:0000171!7.17e-09!14;UBERON:0000170!7.17e-09!14;UBERON:0005597!7.17e-09!14;UBERON:0000118!7.17e-09!14;UBERON:0007100!1.63e-08!18;UBERON:0000948!1.63e-08!18;UBERON:0005498!1.63e-08!18;UBERON:0004140!1.63e-08!18;UBERON:0009881!1.63e-08!18;UBERON:0004141!1.63e-08!18;UBERON:0003084!1.63e-08!18;UBERON:0007005!1.63e-08!18;UBERON:0004139!1.63e-08!18;UBERON:0004291!1.63e-08!18;UBERON:0004535!7.53e-08!23;UBERON:0001009!7.53e-08!23;UBERON:0004872!8.50e-08!33;UBERON:0005153!1.64e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.01e-13,14;UBERON:0000117,1.01e-13,14;UBERON:0000171,1.01e-13,14;UBERON:0000170,1.01e-13,14;UBERON:0005597,1.01e-13,14;UBERON:0000118,1.01e-13,14;UBERON:0007100,1.61e-13,18;UBERON:0000948,1.61e-13,18;UBERON:0005498,1.61e-13,18;UBERON:0004140,1.61e-13,18;UBERON:0009881,1.61e-13,18;UBERON:0004141,1.61e-13,18;UBERON:0003084,1.61e-13,18;UBERON:0007005,1.61e-13,18;UBERON:0004139,1.61e-13,18;UBERON:0004291,1.61e-13,18;UBERON:0004535,1.09e-11,23;UBERON:0001009,1.09e-11,23;UBERON:0005153,8.78e-11,17;UBERON:0005178,8.78e-11,17;UBERON:0005181,8.78e-11,17;UBERON:0002224,8.78e-11,17;UBERON:0000915,8.78e-11,17;UBERON:0008947,8.78e-11,17;UBERON:0003258,8.78e-11,17;UBERON:0005157,9.68e-09,20;UBERON:0000025,4.53e-08,114;UBERON:0004872,4.63e-08,33;UBERON:0001048,8.38e-08,134;UBERON:0004111,1.23e-07,122
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,12.5182615095686,0,2.19686182734472,2.52758868796568,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0.883474163806454,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0.279182999001381,0,0.45839474333043,1.17851434189467,0.711858403995515,0.372798891650601,0.075726193333184,0.0755715601067855,4.05810284182349,1.72084775396277,0,0,0,0,0.842666520790511,0,0.519572009205738,0,0,0,5.09610479413291,0,0,0,0,0.34255163915718,0.258937883647172,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.587943535678524,0.753999547978053,0.247194967734374,0.86759614151947,0,0.161766849947409,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.486723789203273,0.916554274652847,0.497627882440372,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,1.0447564995665,1.23469281844766,0.398068533636986,0,0,0,1.86413195281952,2.34526059981096,3.96136535214233,2.60419209143731,3.73852040320067,3.5481435964097,2.55787339225449,3.48755421819505,1.86824547787471,0.987359099480883,1.97000956894914,2.02672023864639,2.19299981137998,0.878200461164203,2.28150911892632,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,1.33426826306922,0.760902504450237,0.474529061544512,0.988193728344065,0.251335208800269,0.994782360205754,0.38992817423824,0,0,0.796565093017469,0.948339504765408,0.342745537829186,1.1270773567308,1.22190796707189,0,0.701358198903186,0.316182685621286,0.147610147979602,0,0.123397163921801,0.296452627087149,0.333690211432188,0,0,0,0,0.763877555344259,0,0,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,6.83586803616437,0.568474235311454,0.488894929326078,1.01847051465113,1.40814148973101,0.670025029767263,4.99891645860629,9.56154874503214,5.83250033192907,3.10050565508285,3.34855014180723,8.52089236521838,4.48980952851328,8.24499633914616,0,0,0.491764273019036,0,0.321101179975584,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.06839362200353,1.79175655288934,0.824850614862677,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0,0.632073515871632,0,0,0,0.18006109403131,0.388076051348264,0.643011105094777,0,1.07021290561242,1.64549020602121,2.13125464380219,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.807322133479528,0.361877549568935,0.119372344003136,0,0,0,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.826534557253359,0,0.129614973291793,0,0,1.34564891439581,0.496375471371293,0.777804753376191,0.516639293910924,0.337912250981556,0.469428954583016,0.651021924219751,0.314578033277133,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0,0,0,0,0.563047426353546,2.93042598827624,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0.735374033800057,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.760437899670719,0.188626341386076,1.21733959710847,0.832326981263301,0.516919220600519,0,0.579421629724277,0.578727661391115,0,0.735994600671987,0,0.532427418478012,0.953744759789284,1.0174249164263,0.658765662907314,0.423073039458382,1.46342378298218,0.526139422875686,0.814824683075171,0,0.830445126869219,0.29551344712669,0,0.309873682371932,0,1.49886346762768,0.701794825336225,0.644613162144895,1.3390183244819,0.220591419119515,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,12.5182615095686,0,2.19686182734472,2.52758868796568,1.25987779462826,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0.883474163806454,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.182975287204819,0.52091337055676,0.279182999001381,0,0.45839474333043,1.17851434189467,0.711858403995515,0.372798891650601,0.075726193333184,0.0755715601067855,4.05810284182349,1.72084775396277,0,0,0,0,0.842666520790511,0,0.519572009205738,0,0,0,5.09610479413291,0,0,0,0,0.34255163915718,0.258937883647172,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.587943535678524,0.753999547978053,0.247194967734374,0.86759614151947,0,0.161766849947409,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.486723789203273,0.916554274652847,0.497627882440372,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,1.0447564995665,1.23469281844766,0.398068533636986,0,0,0,1.86413195281952,2.34526059981096,3.96136535214233,2.60419209143731,3.73852040320067,3.5481435964097,2.55787339225449,3.48755421819505,1.86824547787471,0.987359099480883,1.97000956894914,2.02672023864639,2.19299981137998,0.878200461164203,2.28150911892632,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,1.33426826306922,0.760902504450237,0.474529061544512,0.988193728344065,0.251335208800269,0.994782360205754,0.38992817423824,0,0,0.796565093017469,0.948339504765408,0.342745537829186,1.1270773567308,1.22190796707189,0,0.701358198903186,0.316182685621286,0.147610147979602,0,0.123397163921801,0.296452627087149,0.333690211432188,0,0,0,0,0.763877555344259,0,0,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.179397413521912,0.964887042726734,6.83586803616437,0.568474235311454,0.488894929326078,1.01847051465113,1.40814148973101,0.670025029767263,4.99891645860629,9.56154874503214,5.83250033192907,3.10050565508285,3.34855014180723,8.52089236521838,4.48980952851328,8.24499633914616,0,0,0.491764273019036,0,0.321101179975584,0.468846746368813,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.06839362200353,1.79175655288934,0.824850614862677,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0,0.632073515871632,0,0,0,0.18006109403131,0.388076051348264,0.643011105094777,0,1.07021290561242,1.64549020602121,2.13125464380219,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.807322133479528,0.361877549568935,0.119372344003136,0,0,0,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,1.09181281873089,0.134864346384821,0.826534557253359,0,0.129614973291793,0,0,1.34564891439581,0.496375471371293,0.777804753376191,0.516639293910924,0.337912250981556,0.469428954583016,0.651021924219751,0.314578033277133,0,0,0.316011120628178,1.01362607645082,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0.116876902181569,0.680191150845634,0,0,0,0,0.563047426353546,2.93042598827624,1.2862102744744,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0,0.735374033800057,0.222246727801615,0.412070114477788,1.28367683836726,1.26348605881899,0.760437899670719,0.188626341386076,1.21733959710847,0.832326981263301,0.516919220600519,0,0.579421629724277,0.578727661391115,0,0.735994600671987,0,0.532427418478012,0.953744759789284,1.0174249164263,0.658765662907314,0.423073039458382,1.46342378298218,0.526139422875686,0.814824683075171,0,0.830445126869219,0.29551344712669,0,0.309873682371932,0,1.49886346762768,0.701794825336225,0.644613162144895,1.3390183244819,0.220591419119515,0.231867835620421
|short_description=p3@Ramp2
|short_description=p3@Ramp2
}}
}}

Latest revision as of 17:14, 26 September 2015

Short description:p3@Ramp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ramp2_5end
Coexpression cluster:MCL_coexpression_mm9:1937
Association with transcript: 19bp_to_ENSMUST00000129680_5end
EntrezGene:Ramp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ramp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B16.84
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C69.56
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A48.52
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H28.24
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte8.09e-076
macroglial cell8.09e-076
astrocyte8.09e-076

Uber anatomy
Ontology termp-valuen
lung1.01e-1314
respiratory tube1.01e-1314
respiration organ1.01e-1314
pair of lungs1.01e-1314
lung primordium1.01e-1314
lung bud1.01e-1314
primary circulatory organ1.61e-1318
heart1.61e-1318
primitive heart tube1.61e-1318
primary heart field1.61e-1318
anterior lateral plate mesoderm1.61e-1318
heart tube1.61e-1318
heart primordium1.61e-1318
cardiac mesoderm1.61e-1318
cardiogenic plate1.61e-1318
heart rudiment1.61e-1318
cardiovascular system1.09e-1123
circulatory system1.09e-1123
epithelial bud8.78e-1117
thoracic cavity element8.78e-1117
thoracic segment organ8.78e-1117
thoracic cavity8.78e-1117
thoracic segment of trunk8.78e-1117
respiratory primordium8.78e-1117
endoderm of foregut8.78e-1117
epithelial fold9.68e-0920
tube4.53e-08114
splanchnic layer of lateral plate mesoderm4.63e-0833
primordium8.38e-08134
anatomical conduit1.23e-07122
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:101107361..101107372,%2B&oldid=4264732"