FFCP PHASE1:Mm9::chr12:71554083..71554094,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:71554083..71554094,+
|short_description=p2@Tmx1
|description=CAGE_peak_2_at_Tmx1_5end
|association_with_transcript=1bp_to_ENSMUST00000021471_5end
|Entrez...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72736 | |EntrezGene=72736 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8VBT0 | |UniProt=Q8VBT0 | ||
|association_with_transcript=1bp_to_ENSMUST00000021471_5end | |||
|cluster_id=chr12:71554083..71554094,+ | |||
|description=CAGE_peak_2_at_Tmx1_5end | |||
|id=chr12:71554083..71554094,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.21e-07!33;CL:0000047!2.21e-07!33;CL:0000031!2.21e-07!33;CL:0000404!2.21e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.21e-07,33;CL:0000047,2.21e-07,33;CL:0000031,2.21e-07,33;CL:0000404,2.21e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.38e-08!71;UBERON:0003075!1.38e-08!71;UBERON:0007284!1.38e-08!71;UBERON:0004121!1.82e-07!102;UBERON:0000924!1.82e-07!102;UBERON:0006601!1.82e-07!102;UBERON:0000073!5.21e-07!75;UBERON:0001016!5.21e-07!75;UBERON:0003056!9.88e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.56e-08,64;UBERON:0003075,1.56e-08,64;UBERON:0007284,1.56e-08,64;UBERON:0010314,1.95e-07,92;UBERON:0004121,3.04e-07,95;UBERON:0000924,3.04e-07,95;UBERON:0006601,3.04e-07,95;UBERON:0001016,5.19e-07,75;UBERON:0003056,9.88e-07,49 | |||
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| |phase1_expression=3.36312578920067,3.48975407639361,3.63999391511629,4.23449895829562,2.50447864973174,2.85394762250213,3.50418960893289,1.29123323441576,1.68946466582,1.40438715793196,2.05461561870606,1.99430397488341,1.36960583944965,2.18551006047494,6.32908547449759,10.3262386368811,15.3903613188192,2.20823515750766,2.74228867211478,4.2438965179803,7.14363637268986,2.08510997521859,2.87319768052829,2.55987876469451,3.21172993494038,2.8711598205751,4.30761996159075,5.17130958446134,3.04037471130198,3.2763916868791,5.09980174507201,2.54012269383853,0.61506478758457,0,3.46621943701529,2.99222361645286,2.6542016314108,6.27797446105362,2.3440060335714,4.18818995179039,1.17646297606203,7.5135003345429,4.85510353031154,0.755380907853464,1.72340783073175,1.28482726513177,1.56478268869608,2.18025156380447,5.05278220289285,2.91644848611425,2.09979632438044,2.87505128729943,2.18117387875057,0.725362142011344,1.00828139742739,1.80081605225163,0.85960031981627,2.06268836910977,4.85559506063035,2.11596391708813,5.70448263155561,3.04960078862219,2.66788438833342,2.2497492932035,0.988866362566974,1.4209602298922,1.79760066311043,0.768436610643109,4.87341177849845,3.51015439662396,3.15487442027073,6.56997264128748,6.18431914664518,4.89963196859816,4.40889166683887,6.43453150627015,3.30347642998166,5.61824287574826,5.83704826373725,4.87979264601717,4.20843160571084,5.2091337055676,9.49222196604695,7.87867654044352,6.72312290217964,5.59794312399969,6.12198227436143,7.82877672466262,10.0715837133135,9.59758813356176,1.73918693221007,1.72084775396277,2.03991400112325,3.77792234146472,5.19821133958135,3.13618820968135,2.52799956237153,2.55645483867087,1.29893002301434,1.41335829804136,5.35204995151386,3.84979432242953,15.2883143823987,14.2213340630666,5.62876706629157,5.32055717497707,3.53867111510348,2.8545969929765,2.07150306917737,2.67195850316685,5.55153045651635,2.13125834818499,3.92046345335299,5.12456977878917,4.8211369925639,3.26733137457156,8.40462890296871,3.18118585223806,1.76922110389975,2.10296904931632,4.19598885074748,5.81850303762267,0,3.51336956413857,3.97948742945565,2.81002760729451,4.07371423320129,3.59941638596045,4.82866862877646,5.24267237916879,4.57500602818627,6.03140890141749,2.78118912307642,4.60287823194595,3.74018480207208,5.02947915510049,3.25885964321012,3.6078021476927,4.0435641349388,5.05060454127538,2.99277018814219,3.67843367093557,5.04173963454978,4.9732589885786,6.46346741937615,5.38077625196369,7.77724313845749,9.05461797586555,2.15567992932842,1.89106080167819,2.63926686245923,2.19195732427575,1.39023624612799,2.43776516565517,1.23469281844766,1.99034266818493,4.91549231119264,2.83082697826187,0.852490498186778,4.76389276831654,0.938104239924385,2.70093092191522,1.89395788468168,1.37734962223183,3.08534225774756,2.32533944750408,2.14618721119695,5.02090972178829,6.91151369636618,6.40253109908471,6.89084881139774,8.33339928324394,6.14740322814942,5.50246316917524,4.20579897128254,5.65975368086064,2.31293148088659,2.64450566663544,3.19932375802851,4.41249676534833,2.70621668776396,4.43703754171354,6.67134131534611,4.75564065281398,2.84717436926707,7.08205505313247,3.77002813200404,4.37704238490532,4.874102177978,0.898819408654221,4.32276099749388,3.78368419183298,1.70701110857774,3.19895835307241,2.25415471346161,1.01825663922657,2.52138233317913,3.92760591385784,3.47800954183415,2.50937251565324,3.1399745568275,4.19550357334122,3.55743152504579,7.50802975722423,8.64859578498093,10.3436571697033,7.50582449137461,8.44120059133459,5.60176873919124,7.76779571117189,5.5125977103512,4.94210543738547,4.31304619582064,2.60498663367952,2.49630138491648,4.54641980304801,2.15276896226295,3.37710464954357,2.58654466233247,3.41084541186873,3.7481944581666,2.37643120085263,2.11221223459652,2.68010011906905,2.38043640886014,1.95133647857799,1.41871629695572,1.99318220683897,2.71073106717728,1.14704320301017,2.24490476425664,3.7608755231193,3.01582567878545,4.35124547054968,1.47529281905711,1.65562047782839,3.85321415970701,3.98519734413491,1.63934945376675,1.26235463602186,6.62567260774139,3.90438744296638,4.73931475012158,3.82350076724083,4.45597348164788,3.11384183867716,3.64329631507405,5.26060544240361,6.32460444714438,3.21321316421807,5.96148357874728,1.6025904330053,2.28041743095006,4.12425307431339,3.98235415019888,2.91336763385978,1.51161778482376,2.64047111658257,2.95301892880773,2.76691633149535,1.03371317267288,3.27180356529755,2.85197902707777,0.948110273807448,2.10837217149998,2.06271086496374,6.12791290356818,4.14140516272013,2.71653235943784,4.28674070063185,8.33499098118686,6.77801506887868,5.59466670047211,4.26250928760439,3.98941903708308,5.71946591332314,1.54369878638473,1.31909002353184,2.9063596805263,3.25689794612042,3.10368094408155,2.46211349617592,2.62332752966866,5.00648315428376,6.83483523191411,2.68302928352189,4.07427960213366,8.2882121082064,6.15124024744613,5.94823250336959,3.90950388985867,2.51912614182584,2.76399947608848,1.90934123603023,4.4287039101359,4.0663893425369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| ||
|short_description=p2@Tmx1 | |||
}} | }} |
Latest revision as of 17:54, 26 September 2015
Short description: | p2@Tmx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmx1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENSMUST00000021471_5end |
EntrezGene: | Tmx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.21e-07 | 33 |
neuronal stem cell | 2.21e-07 | 33 |
neuroblast | 2.21e-07 | 33 |
electrically signaling cell | 2.21e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.56e-08 | 64 |
neural plate | 1.56e-08 | 64 |
presumptive neural plate | 1.56e-08 | 64 |
structure with developmental contribution from neural crest | 1.95e-07 | 92 |
ectoderm-derived structure | 3.04e-07 | 95 |
ectoderm | 3.04e-07 | 95 |
presumptive ectoderm | 3.04e-07 | 95 |
nervous system | 5.19e-07 | 75 |
pre-chordal neural plate | 9.88e-07 | 49 |