FFCP PHASE2:Mm9::chr7:51697439..51697450,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:272381 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:P0C192 |association_with_transcript=-404bp_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=272381 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P0C192 | ||
|association_with_transcript=-404bp_to_ENSMUST00000058667_5end | |association_with_transcript=-404bp_to_ENSMUST00000058667_5end | ||
|cluster_id=chr7:51697439..51697450,+ | |cluster_id=chr7:51697439..51697450,+ | ||
Latest revision as of 19:14, 26 September 2015
| Short description: | p10@Lrrc4b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_10_at_Lrrc4b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | -404bp_to_ENSMUST00000058667_5end |
| EntrezGene: | Lrrc4b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p10@Lrrc4b |
|---|
0.0
1.0
2.0
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4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.49e-26 | 23 |
| neuroblast (sensu Vertebrata) | 3.49e-26 | 23 |
| neuron | 5.61e-17 | 33 |
| neuronal stem cell | 5.61e-17 | 33 |
| neuroblast | 5.61e-17 | 33 |
| electrically signaling cell | 5.61e-17 | 33 |
| electrically responsive cell | 9.91e-14 | 39 |
| electrically active cell | 9.91e-14 | 39 |
| neural cell | 1.00e-13 | 43 |
| ectodermal cell | 2.58e-13 | 44 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.99e-28 | 54 |
| central nervous system | 1.73e-26 | 73 |
| nervous system | 1.37e-25 | 75 |
| neural tube | 8.07e-25 | 52 |
| neural rod | 8.07e-25 | 52 |
| future spinal cord | 8.07e-25 | 52 |
| neural keel | 8.07e-25 | 52 |
| neurectoderm | 1.34e-20 | 64 |
| neural plate | 1.34e-20 | 64 |
| presumptive neural plate | 1.34e-20 | 64 |
Showing 1 to 10 of 56 entries
