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FFCP PHASE1:Mm9::chr9:51856351..51856424,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19684
|EntrezGene=19684
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46
|UniProt=P26043,Q7TSG6,Q3U111,Q3TH46
|association_with_transcript=305bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end
|association_with_transcript=305bp_to_ENSMUST00000000590,ENSMUST00000061352,ENSMUST00000172248,NM_001104617,NM_009041,uc009plr.2,uc009pls.2_5end
|cluster_id=chr9:51856351..51856424,+
|description=CAGE_peak_1_at_Rdx_5end
|description=CAGE_peak_1_at_Rdx_5end
|id=chr9:51856351..51856424,+
|id=chr9:51856351..51856424,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!1.93e-17!147;UBERON:0009569!1.96e-17!66;UBERON:0003914!1.22e-14!47;UBERON:0000926!2.55e-13!193;UBERON:0004120!2.55e-13!193;UBERON:0006603!2.55e-13!193;UBERON:0005172!1.91e-12!49;UBERON:0005173!1.91e-12!49;UBERON:0002417!1.91e-12!49;UBERON:0000916!1.91e-12!49;UBERON:0005177!4.04e-12!85;UBERON:0002107!1.43e-11!22;UBERON:0007499!1.43e-11!22;UBERON:0006925!1.43e-11!22;UBERON:0009497!1.43e-11!22;UBERON:0000015!1.43e-11!22;UBERON:0002423!1.43e-11!22;UBERON:0006235!1.43e-11!22;UBERON:0008835!1.43e-11!22;UBERON:0003894!1.43e-11!22;UBERON:0004161!1.43e-11!22;UBERON:0008836!1.43e-11!22;UBERON:0000466!1.07e-10!79;UBERON:0002365!1.57e-10!25;UBERON:0002330!1.57e-10!25;UBERON:0009854!3.09e-10!23;UBERON:0009856!3.09e-10!23;UBERON:0002100!7.38e-10!98;UBERON:0000025!2.35e-07!114;UBERON:0005256!3.41e-07!47;UBERON:0002368!3.62e-07!60;UBERON:0003104!3.72e-07!131;UBERON:0009142!3.72e-07!131;UBERON:0002048!5.19e-07!14;UBERON:0000117!5.19e-07!14;UBERON:0000171!5.19e-07!14;UBERON:0000170!5.19e-07!14;UBERON:0005597!5.19e-07!14;UBERON:0000118!5.19e-07!14;UBERON:0007100!6.04e-07!18;UBERON:0000948!6.04e-07!18;UBERON:0005498!6.04e-07!18;UBERON:0004140!6.04e-07!18;UBERON:0009881!6.04e-07!18;UBERON:0004141!6.04e-07!18;UBERON:0003084!6.04e-07!18;UBERON:0007005!6.04e-07!18;UBERON:0004139!6.04e-07!18;UBERON:0004291!6.04e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0001048,2.34e-20,134;UBERON:0009569,1.96e-17,66;UBERON:0003914,1.21e-14,47;UBERON:0005172,1.91e-12,49;UBERON:0005173,1.91e-12,49;UBERON:0002417,1.91e-12,49;UBERON:0000916,1.91e-12,49;UBERON:0005177,2.02e-12,79;UBERON:0002107,1.43e-11,22;UBERON:0007499,1.43e-11,22;UBERON:0006925,1.43e-11,22;UBERON:0009497,1.43e-11,22;UBERON:0000015,1.43e-11,22;UBERON:0002423,1.43e-11,22;UBERON:0006235,1.43e-11,22;UBERON:0008835,1.43e-11,22;UBERON:0003894,1.43e-11,22;UBERON:0004161,1.43e-11,22;UBERON:0008836,1.43e-11,22;UBERON:0002100,1.52e-10,90;UBERON:0002365,1.57e-10,25;UBERON:0002330,1.57e-10,25;UBERON:0009854,3.09e-10,23;UBERON:0009856,3.09e-10,23;UBERON:0003104,5.70e-10,61;UBERON:0009142,5.70e-10,61;UBERON:0005256,7.00e-08,45;UBERON:0000025,2.35e-07,114;UBERON:0002368,3.62e-07,60;UBERON:0001041,4.97e-07,80;UBERON:0002048,5.19e-07,14;UBERON:0000117,5.19e-07,14;UBERON:0000171,5.19e-07,14;UBERON:0000170,5.19e-07,14;UBERON:0005597,5.19e-07,14;UBERON:0000118,5.19e-07,14;UBERON:0007100,6.04e-07,18;UBERON:0000948,6.04e-07,18;UBERON:0005498,6.04e-07,18;UBERON:0004140,6.04e-07,18;UBERON:0009881,6.04e-07,18;UBERON:0004141,6.04e-07,18;UBERON:0003084,6.04e-07,18;UBERON:0007005,6.04e-07,18;UBERON:0004139,6.04e-07,18;UBERON:0004291,6.04e-07,18
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3,42.318569331372,27.2226179663391,13.73918716893,67.7259851264749,91.881949005523,72.2164917392418,57.4140961886129,67.0856599786964,65.3548706797319,66.3997573178758,61.8472647663123,67.1854625794783,51.485938113024,59.1881096023715,76.0399216520765,45.5056013704577,36.8959891828099,41.2898047802606,44.0431589894725,48.8742879172224,47.6835251475036,46.6358344137479,55.2358831632919,50.584191424022,57.7647594444899,47.388307014315,56.3306550675769,52.7240892189005,47.1013915791723,44.8926159558118,103.22346831894,82.0881787976703,115.168846825758,31.6830934212792,39.225637369297,51.4656064191015,42.8736758158132,42.1320567389705,37.8383734553435,39.12764510311,42.9671635079547,67.7101538434129,43.8452812653211,56.6545423042275,41.1763725141402,35.5753750547134,35.345107900768,36.2432218226274,53.2429093106826,51.873233542134,50.7078809089778,52.5110508867515,51.7744511691116,49.2700602646038,50.0055137553634,44.5035723636012,48.4588006483641,55.5933865880354,50.4423806781577,46.4020799809747,57.2149610640982,54.357354391734,52.0939703427412,46.6767817457412,62.9251889880565,54.2074909503011,53.1590812036265,55.7883907309366,49.0303030911144,47.0310886322244,53.8865789280945,61.481534235475,59.8535659441503,58.1302356215818,49.024696729903,47.3525480588117,54.7290578798823,40.4022435593572,44.0135917240686,55.8520415069445,40.9231043169689,56.2420733505056,54.0138510747196,36.971965534816,48.8917061650904,47.9162450527705,46.4830646927289,48.7507036254129,50.7790560008723
|phase1_expression=41.7988490943512,0.348975407639361,0,0,0.500895729946347,0.839396359559449,0.934450562382103,31.5060909197446,48.7128978644767,47.2810343170427,38.0103889460621,42.0399277905423,33.2129416066539,33.219752919219,52.9644521286904,42.9247566866431,48.9693314689703,29.9689057090326,30.7136331276855,21.2194825899015,57.319177561821,33.758923408301,37.8739694251456,1.75991665072747,2.52350209173887,1.14846392823004,0,0,0.950117097281869,1.26015064879965,0.443461021310609,11.4305521222734,12.3012957516914,15.8481681015439,0.577703239502549,0,0,28.0416192593728,22.6587249911902,38.2172333100873,24.1174910092716,32.1031377930469,28.1596004758069,38.7762199364778,38.9287415882936,36.3422569280129,28.1660883965294,17.6600376668162,12.5221124158649,29.9422044574396,17.2183298599196,21.5628846547457,33.0531733933741,44.247090662692,41.3395372945231,65.8584156252024,120.630578214217,71.162748734287,27.1104057551861,22.2176211294254,31.0577387718028,15.5868484751801,19.5644855144451,9.89889689009539,10.8775299882367,11.3676818391376,10.7856039786626,16.9056054341484,43.4459475572521,27.0011876663381,35.9655683910863,43.1332986449743,34.6763609294033,35.7673133707666,23.9613677545591,33.0918763179608,58.361416929676,60.9068602666345,68.8157268987971,21.761237475482,23.0548861878072,31.7757156039624,40.2023518561989,41.0816705323126,58.5217288985183,74.8356607103116,65.06385812519,40.6350791899155,63.761454786541,62.6488233285252,126.380917073932,67.9734862815295,69.3570760381906,145.719861742211,217.025323427521,210.572636935748,65.7279886216599,38.8581135477972,24.9394564418754,25.7937889392548,37.6051930803737,51.3305909657271,94.2779386914589,71.1066703153331,44.5971544483101,45.8581356509928,40.9474800461974,69.5379827489075,61.1093405407325,48.2436951960681,76.1600584503336,74.2895767081625,94.552353874984,81.0887806173109,62.0868373676521,55.7959665503759,82.5631192232809,60.2979318356032,43.3459170455438,59.8537344805414,56.5354287258607,63.0337829075789,9.31958806090611,45.9665851308129,40.6326611218103,7.40825460104915,56.9121841403121,23.3962065087429,38.8834894843578,40.7430539181118,33.8550446085784,42.0942079578096,34.591039718263,33.4987249102733,48.6224024269371,48.5101376572595,62.1220119486929,44.4132885078032,42.4574234168574,58.9237196482127,55.5614291450745,49.1990503487632,67.1631744173953,62.2410897661503,62.457506220919,65.9785659466976,62.4053485567794,47.6014202159789,53.245294254412,55.0298693288354,62.9905024506937,47.3462782043562,60.0582058327291,66.1679116392116,59.0594731490798,61.3025541800959,23.87524836865,27.0215302470451,44.8978329045036,103.562886267751,77.8626519137239,70.5843280927178,65.5782917571032,69.0642453433387,67.4147283317843,71.852988927876,67.8731705541037,71.5771548710749,57.9250671695451,63.6969760626889,69.3138321617066,72.0765938006888,51.1551768628148,59.5876499296051,39.74480027862,47.6448355316087,5.94753809370836,7.1401652999157,58.8675571477246,60.381534683714,41.7530574683582,31.8659968904881,24.6839628667806,23.5879776379573,8.54152310780121,21.4108641141214,22.6201687920243,20.6914730922797,25.3453313254856,15.2799299471218,11.0230405436094,12.7450414882795,22.1911444115106,66.149888801033,57.480945193271,66.3903328775724,72.3442777135244,80.4457854141954,79.4250906280672,79.7094799089852,96.0832214389214,77.3700217789689,94.2719354137134,71.0760150350561,61.1298474802061,58.2392871076771,76.0725455206886,68.7354905294388,61.1102044275408,63.86854251408,79.6083963465424,81.8193011300483,244.405951096503,88.5695455451038,95.4835279730555,106.588286493681,103.1535127751,110.479566392211,78.1505994404738,62.7216572960305,65.6748855061364,61.9569563079437,67.8254817553771,63.9873903427736,72.8413541111202,112.59211481395,79.2904774854141,78.3985001356663,81.9597510899484,82.9148372461634,77.0175019121894,88.0912766761406,33.1740824666399,33.1782467129413,37.8658490224658,45.5295631402809,48.0046264063498,60.2468069083924,93.442918864705,69.9344468356113,46.695216473606,54.6614242015294,55.1483898195965,54.4848859331819,50.7980976907859,76.1475867821959,50.1965270076869,50.8525192765683,61.2696055817111,50.7687679946455,64.8666189401788,38.6402359957944,66.457879416259,67.8027205417121,41.1509928853885,45.3999789609815,32.9532677091579,35.4577549941088,25.3959627877465,43.3483558600938,38.2473873888967,52.3488570447608,40.6407011358582,49.9338077538589,34.7881408297496,48.4737053266478,38.469675450178,61.9410163467707,22.120334926851,48.6545069521715,55.5074931300316,58.6833409910812,50.1874512836469,28.9241701658869,93.164668101293,83.0381717786175,37.0487708732336,65.2949561648261,56.5125493435669,60.9160541774374,49.0620333852891,44.3180429311665,18.0718118710507,53.2170616770163,36.5663684907405,54.4861331422907,55.9287472656529,41.2526920840273,49.7566988904532,31.3426097292936,37.7352114586359,45.4842220051888,38.2813927438254,12.4107180341965,49.1902470018665,42.9004075637651,45.4702484859783,46.2085134191976,38.8685363468196,39.6501178371373,42.318569331372,27.2226179663391,13.73918716893,67.7259851264749,91.881949005523,72.2164917392418,57.4140961886129,67.0856599786964,65.3548706797319,66.3997573178758,61.8472647663123,67.1854625794783,51.485938113024,59.1881096023715,76.0399216520765,45.5056013704577,36.8959891828099,41.2898047802606,44.0431589894725,48.8742879172224,47.6835251475036,46.6358344137479,55.2358831632919,50.584191424022,57.7647594444899,47.388307014315,56.3306550675769,52.7240892189005,47.1013915791723,44.8926159558118,103.22346831894,82.0881787976703,115.168846825758,31.6830934212792,39.225637369297,51.4656064191015,42.8736758158132,42.1320567389705,37.8383734553435,39.12764510311,42.9671635079547,67.7101538434129,43.8452812653211,56.6545423042275,41.1763725141402,35.5753750547134,35.345107900768,36.2432218226274,53.2429093106826,51.873233542134,50.7078809089778,52.5110508867515,51.7744511691116,49.2700602646038,50.0055137553634,44.5035723636012,48.4588006483641,55.5933865880354,50.4423806781577,46.4020799809747,57.2149610640982,54.357354391734,52.0939703427412,46.6767817457412,62.9251889880565,54.2074909503011,53.1590812036265,55.7883907309366,49.0303030911144,47.0310886322244,53.8865789280945,61.481534235475,59.8535659441503,58.1302356215818,49.024696729903,47.3525480588117,54.7290578798823,40.4022435593572,44.0135917240686,55.8520415069445,40.9231043169689,56.2420733505056,54.0138510747196,36.971965534816,48.8917061650904,47.9162450527705,46.4830646927289,48.7507036254129,50.7790560008723
|short_description=p1@Rdx
|short_description=p1@Rdx
}}
}}

Latest revision as of 19:55, 26 September 2015

Short description:p1@Rdx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rdx_5end
Coexpression cluster:NA
Association with transcript: 305bp_to_ENSMUST00000000590, ENSMUST00000061352, ENSMUST00000172248, NM_001104617, NM_009041, uc009plr.2, uc009pls.2_5end
EntrezGene:Rdx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rdx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E748.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F247.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F142.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.21
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A152.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A342.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A548.97
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.97
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.71
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A621.22
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A357.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I937.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H122.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H428.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D938.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.66
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.52
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C165.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1120.63
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C571.16
Mouse Granule cells, donor1.CNhs12131.11713-123C327.11
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C731.06
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D543.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.97
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F143.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D534.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D633.09
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D358.36
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F360.91
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D768.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I658.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D674.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F665.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E140.64
Mouse Schwann, donor1.CNhs12507.11728-123D963.76
Mouse Schwann, donor2.CNhs12573.11746-123F962.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3126.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F767.97
Mouse hepatocyte, donor1.CNhs13078.11714-123C469.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C8145.72
Mouse hepatocyte, donor6.CNhs13090.11822-124F4217.03
Mouse hepatocyte, donor8.CNhs13091.11824-124F6210.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A765.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I738.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I825.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G637.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I894.28
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G245.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G340.95
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B669.54
accessory axillary lymph node, adult.CNhs10475.1063-29H961.11
adrenal gland, adult.CNhs10508.49-24D748.24
adrenal gland, embryo E14.CNhs11038.406-44C576.16
adrenal gland, embryo E16.CNhs11004.1254-43D674.29
adrenal gland, embryo E17.CNhs11043.1263-45I194.55
adrenal gland, embryo E18.CNhs11026.1262-18F581.09
adrenal gland, neonate N00.CNhs11191.1311-23C162.09
adrenal gland, neonate N25.CNhs11223.1377-27I355.80
amnion, adult pregnant day17.5.CNhs10488.583-22A882.56
aorta, adult.CNhs10498.46-23H160.30
bone (os femoris), adult.CNhs10483.56-12G243.35
bone (os femoris), neonate N02.CNhs11227.1985-43F559.85
bone (os femoris), neonate N16.CNhs11225.1525-43A656.54
bone (os femoris), neonate N20.CNhs11195.1350-25C363.03
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B245.97
cerebellum, neonate N30.CNhs11135.1395-42I240.63
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C756.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D123.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.88
corpora quadrigemina, adult.CNhs10501.16-22A440.74
corpus striatum, adult.CNhs10487.19-21D833.86
corpus striatum, neonate N00.CNhs11226.630-43F142.09
cortex, adult.CNhs10473.12-14D534.59
cortex, neonate N30.CNhs11107.1392-42F233.50
diencephalon, adult.CNhs10482.20-12F248.62
diencephalon, neonate N30.CNhs11201.1388-42B248.51
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B162.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A244.41
epididymis, adult.CNhs10490.58-23B242.46
eyeball, adult.CNhs10484.31-12G458.92
eyeball, embryo E12.CNhs11016.345-16C655.56
eyeball, embryo E14.CNhs10521.399-16E249.20
eyeball, embryo E15.CNhs10593.426-16C967.16
eyeball, embryo E17.CNhs11023.1261-18D462.24
eyeball, neonate N00.CNhs11207.633-15C662.46
eyeball, neonate N01.CNhs11140.1532-43E765.98
eyeball, neonate N02.CNhs11205.1551-44G862.41
eyeball, neonate N16.CNhs11188.777-19A247.60
forelimb, embryo E11.CNhs10596.335-25E253.25
forelimb, embryo E12.CNhs10600.359-14H255.03
forelimb, embryo E13.CNhs10589.384-1E262.99
forelimb, embryo E14.CNhs10577.413-26A847.35
forelimb, embryo E15.CNhs11007.437-20E760.06
forelimb, embryo E17.CNhs10598.1517-43C466.17
forelimb, embryo E18.CNhs11008.1520-43B559.06
gonad, embryo E13.CNhs11044.1564-45I661.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.02
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D544.90
heart, embryo E11.CNhs10586.331-24E9103.56
heart, embryo E12.CNhs11015.353-12F577.86
heart, embryo E13.CNhs11013.376-3I970.58
heart, embryo E14.CNhs10597.403-26D465.58
heart, embryo E15.CNhs11017.431-16C869.06
heart, embryo E16.CNhs11021.457-17C667.41
heart, embryo E17.CNhs11025.479-18E571.85
heart, embryo E18.CNhs11030.1283-20G367.87
heart, neonate N00.CNhs11213.639-21E371.58
heart, neonate N03.CNhs11221.1349-25I257.93
heart, neonate N10.CNhs11118.749-24G163.70
heart, neonate N16.CNhs11209.782-15G169.31
heart, neonate N20.CNhs11127.821-26I672.08
heart, neonate N25.CNhs11196.1351-25D351.16
heart, neonate N30.CNhs11202.1390-42D259.59
hippocampus, adult.CNhs10478.13-16E839.74
hippocampus, neonate N00.CNhs11228.627-43G147.64
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I558.87
intestine, embryo E13.CNhs11010.381-16D560.38
intestine, embryo E15.CNhs10602.976-16D841.75
intestine, embryo E16.CNhs10585.463-22H431.87
intestine, embryo E17.CNhs10582.482-18D324.68
intestine, embryo E18.CNhs10526.1289-20F723.59
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E921.41
intestine, neonate N06.CNhs11102.688-20B822.62
intestine, neonate N07.CNhs11095.720-20F220.69
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I922.19
kidney, embryo E15.CNhs10997.434-16F866.15
kidney, embryo E16.CNhs10584.464-22A557.48
kidney, embryo E17.CNhs11028.483-18I266.39
kidney, embryo E18.CNhs11001.1288-20C772.34
kidney, neonate N00.CNhs11214.646-21G780.45
kidney, neonate N10.CNhs11206.758-6D579.43
kidney, neonate N20.CNhs11113.832-19I179.71
kidney, neonate N25.CNhs11122.1353-25F396.08
kidney, neonate N30.CNhs11203.1385-42H177.37
liver, adult pregnant day01.CNhs10466.508-5B294.27
liver, embryo E12.CNhs10601.355-15F871.08
liver, embryo E13.CNhs10524.378-3H661.13
liver, embryo E14.CNhs10594.409-16E158.24
liver, embryo E15.CNhs10520.433-16D776.07
liver, embryo E16.CNhs10523.462-17F568.74
liver, embryo E17.CNhs10510.481-18A361.11
liver, embryo E18.CNhs10579.499-43G463.87
liver, neonate N00.CNhs11117.641-24F479.61
liver, neonate N03.CNhs11123.1345-25G281.82
liver, neonate N06.CNhs11101.684-20A8244.41
liver, neonate N07.CNhs11103.716-20H288.57
liver, neonate N10.CNhs11115.751-24B995.48
liver, neonate N20.CNhs11220.823-25A3106.59
liver, neonate N25.CNhs11198.1368-26H1103.15
liver, neonate N30.CNhs11106.1382-42D1110.48
lung, adult.CNhs10474.28-22B178.15
lung, embryo E12.CNhs10522.354-16G262.72
lung, embryo E14.CNhs10604.404-26F865.67
lung, embryo E15.CNhs11020.432-17C561.96
lung, embryo E16.CNhs10998.458-17B667.83
lung, embryo E17.CNhs10605.480-44A663.99
lung, embryo E18.CNhs10583.1287-20I672.84
lung, neonate N00.CNhs11224.640-42C6112.59
lung, neonate N06.CNhs11212.683-20E579.29
lung, neonate N07.CNhs11111.715-19A378.40
lung, neonate N10.CNhs11219.750-23E681.96
lung, neonate N20.CNhs11109.822-18A482.91
lung, neonate N25.CNhs11119.1359-25C777.02
lung, neonate N30.CNhs11133.1394-42H288.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.18
mammary gland, adult lactating day02.CNhs10480.595-22B637.87
mammary gland, adult pregnant day19.CNhs10476.588-5H245.53
medulla oblongata, adult.CNhs10477.17-12C248.00
medulla oblongata, neonate N30.CNhs11200.1396-42A360.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C793.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C269.93
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E146.70
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E254.66
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E355.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D754.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D850.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D976.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D450.20
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D550.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D661.27
olfactory brain, adult.CNhs10489.18-22I950.77
ovary, adult.CNhs10507.91-2I764.87
ovary, embryo E18.CNhs11040.505-44H738.64
ovary, neonate N00.CNhs11217.1299-22I466.46
oviduct, adult pregnant day01.CNhs10500.988-6G667.80
pancreas, adult.CNhs10486.34-16E441.15
pancreas, embryo E14.CNhs11012.405-44F445.40
pancreas, embryo E15.CNhs11042.1556-45F232.95
pancreas, embryo E16.CNhs11003.460-26E535.46
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I743.35
pancreas, neonate N00.CNhs11105.645-26G938.25
pancreas, neonate N01.CNhs11138.1531-43D752.35
pancreas, neonate N02.CNhs11139.1539-43D840.64
pancreas, neonate N16.CNhs11136.787-43B649.93
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G838.47
pituitary gland, embryo E12.CNhs11018.346-16E661.94
pituitary gland, embryo E13.CNhs11009.370-44C722.12
pituitary gland, embryo E14.CNhs11037.398-44A548.65
pituitary gland, embryo E15.CNhs10592.427-16B955.51
pituitary gland, embryo E16.CNhs11036.449-43F658.68
pituitary gland, embryo E17.CNhs11039.1265-44F550.19
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I793.16
placenta, adult pregnant day17.CNhs10464.577-18G383.04
prostate, adult.CNhs10470.859-1F837.05
skin, adult.CNhs10492.30-1C365.29
skin, neonate N00.CNhs11124.650-25G456.51
skin, neonate N03.CNhs11215.662-22H360.92
skin, neonate N06.CNhs11097.693-20I549.06
skin, neonate N10.CNhs11108.762-6C444.32
small intestine, neonate N16.CNhs11114.790-21I118.07
spinal cord, adult.CNhs10505.24-13C953.22
spleen, adult.CNhs10465.25-2G236.57
spleen, embryo E16.CNhs11035.461-43C154.49
spleen, embryo E18.CNhs11011.1271-21F255.93
spleen, neonate N10.CNhs11116.752-24D141.25
spleen, neonate N20.CNhs11112.824-19H149.76
spleen, neonate N25.CNhs11099.1354-25G331.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C637.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.28
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E349.19
stomach, embryo E15.CNhs10603.1252-16G842.90
stomach, embryo E16.CNhs11022.459-17D445.47
stomach, embryo E17.CNhs11006.1035-18D546.21
stomach, embryo E18.CNhs10999.1286-20C638.87
stomach, neonate N03.CNhs11193.1340-24B839.65
stomach, neonate N07.CNhs11210.718-18A942.32
stomach, neonate N25.CNhs11104.1355-25E427.22
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C167.73
testis, adult.CNhs10504.57-7G591.88
testis, embryo E13.CNhs11031.389-23F572.22
testis, embryo E15.CNhs11034.443-27C557.41
testis, embryo E16.CNhs11033.470-26G567.09
testis, embryo E17.CNhs11029.486-18I565.35
testis, embryo E18.CNhs11027.503-18G566.40
testis, neonate N00.CNhs11189.1300-22B761.85
testis, neonate N07.CNhs11222.726-26I467.19
testis, neonate N10.CNhs11204.763-44D951.49
testis, neonate N20.CNhs11110.839-18H359.19
testis, neonate N30.CNhs11130.1391-42E276.04
thymus, adult.CNhs10471.38-12B545.51
thymus, embryo E14.CNhs11041.402-44I436.90
thymus, embryo E15.CNhs11005.430-45I241.29
thymus, embryo E16.CNhs11002.456-26C544.04
thymus, embryo E17.CNhs10581.478-18C148.87
thymus, embryo E18.CNhs10595.1273-19G447.68
thymus, neonate N02.CNhs11181.1541-43F846.64
thymus, neonate N03.CNhs11137.2104-43C755.24
thymus, neonate N06.CNhs11197.681-26C450.58
thymus, neonate N07.CNhs11211.713-19D357.76
thymus, neonate N10.CNhs11194.748-24E447.39
thymus, neonate N20.CNhs11186.820-7A256.33
thymus, neonate N25.CNhs11125.1362-25G752.72
thymus, neonate N30.CNhs11132.1393-42G247.10
tongue, adult.CNhs10499.32-1B444.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3103.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F782.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5115.17
urinary bladder, adult.CNhs10481.879-12E431.68
uterus, adult pregnant day19.CNhs10497.590-15F539.23
uterus, adult.CNhs10509.92-27E551.47
vagina, adult.CNhs10502.89-27D542.87
vesicular gland, adult.CNhs10491.51-27F842.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D767.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A556.65
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I853.24
whole body, embryo E12.CNhs10587.857-27C951.87
whole body, embryo E13.CNhs10512.372-23H250.71
whole body, embryo E14.5.CNhs10578.420-27D252.51
whole body, embryo E14.CNhs10519.395-14B151.77
whole body, embryo E16.CNhs10514.453-14F249.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G548.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G555.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G550.44
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G546.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G557.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G554.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G552.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G562.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G554.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G553.16
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G555.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G549.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G547.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G553.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G561.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G559.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G558.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G549.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G547.35
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G554.73
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G544.01
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G555.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G556.24
whole body, embryo E17.5.CNhs10513.490-9F954.01
whole body, embryo E17.CNhs10517.475-3I536.97
whole body, embryo E18.CNhs10516.493-3B348.89
whole body, neonate N00.CNhs10525.657-19C247.92
whole body, neonate N01.CNhs10576.659-23C646.48
whole body, neonate N06.CNhs10515.692-21D148.75
whole body, neonate N10.CNhs10518.761-6B450.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium2.34e-20134
subdivision of trunk1.96e-1766
epithelial tube1.21e-1447
abdomen element1.91e-1249
abdominal segment element1.91e-1249
abdominal segment of trunk1.91e-1249
abdomen1.91e-1249
trunk region element2.02e-1279
liver1.43e-1122
epithelial sac1.43e-1122
digestive gland1.43e-1122
epithelium of foregut-midgut junction1.43e-1122
anatomical boundary1.43e-1122
hepatobiliary system1.43e-1122
foregut-midgut junction1.43e-1122
hepatic diverticulum1.43e-1122
liver primordium1.43e-1122
septum transversum1.43e-1122
liver bud1.43e-1122
trunk1.52e-1090
exocrine gland1.57e-1025
exocrine system1.57e-1025
digestive tract diverticulum3.09e-1023
sac3.09e-1023
mesenchyme5.70e-1061
entire embryonic mesenchyme5.70e-1061
trunk mesenchyme7.00e-0845
tube2.35e-07114
endocrine gland3.62e-0760
foregut4.97e-0780
lung5.19e-0714
respiratory tube5.19e-0714
respiration organ5.19e-0714
pair of lungs5.19e-0714
lung primordium5.19e-0714
lung bud5.19e-0714
primary circulatory organ6.04e-0718
heart6.04e-0718
primitive heart tube6.04e-0718
primary heart field6.04e-0718
anterior lateral plate mesoderm6.04e-0718
heart tube6.04e-0718
heart primordium6.04e-0718
cardiac mesoderm6.04e-0718
cardiogenic plate6.04e-0718
heart rudiment6.04e-0718
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