FFCP PHASE1:Mm9::chr9:53619453..53619470,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:53619453..53619470,+
|short_description=p3@Slc35f2
|description=CAGE_peak_3_at_Slc35f2_5end
|association_with_transcript=111bp_to_ENSMUST00000048670,NM_028...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72022 | |EntrezGene=72022 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TML3 | |UniProt=Q7TML3 | ||
|association_with_transcript=111bp_to_ENSMUST00000048670,NM_028060,uc009pmn.2_5end | |||
|cluster_id=chr9:53619453..53619470,+ | |||
|description=CAGE_peak_3_at_Slc35f2_5end | |||
|id=chr9:53619453..53619470,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.69e-08!9;CL:0002251!6.69e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.24e-09,9;CL:0002251,1.24e-09,9;CL:0000066,9.21e-08,25;CL:0000682,1.71e-07,3;CL:0000239,1.89e-07,6;CL:0000677,1.89e-07,6;CL:0000584,1.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.47e-13!43;UBERON:0000344!1.84e-12!15;UBERON:0001242!2.23e-11!13;UBERON:0000060!2.23e-11!13;UBERON:0001262!2.23e-11!13;UBERON:0004786!2.23e-11!13;UBERON:0005409!4.66e-10!59;UBERON:0004923!2.81e-08!24;UBERON:0003350!6.69e-08!9;UBERON:0004808!6.69e-08!9;UBERON:0001277!6.69e-08!9;UBERON:0000489!1.22e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.40e-37,31;UBERON:0005409,7.34e-23,47;UBERON:0000344,3.59e-18,15;UBERON:0001242,6.99e-18,13;UBERON:0001262,6.99e-18,13;UBERON:0004786,6.99e-18,13;UBERON:0004923,1.92e-10,24;UBERON:0002108,2.08e-10,4;UBERON:0003350,1.24e-09,9;UBERON:0004808,1.24e-09,9;UBERON:0001277,1.24e-09,9;UBERON:0000331,3.42e-08,3;UBERON:0002116,3.42e-08,3;UBERON:0001204,3.42e-08,3;UBERON:0001168,3.42e-08,3;UBERON:0000485,9.76e-08,11;UBERON:0001007,1.67e-07,116;UBERON:0001555,1.67e-07,116;UBERON:0007026,1.67e-07,116;UBERON:0004119,2.80e-07,118;UBERON:0000925,2.80e-07,118;UBERON:0006595,2.80e-07,118;UBERON:0004921,6.00e-07,114 | |||
|phase1_expression=0,6.63053274514786,5.91499011206397,22.6848158480123,22.0394121176393,0.33575854382378,0.934450562382103,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,1.27993938234725,0.45881856213434,5.16808767703518,1.29228598847722,1.72376986148711,6.46079626151671,6.80481350351813,1.77384408524244,0,0,0,2.02196133825892,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.662605622854841,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,1.76777151284201,0.711858403995515,0.559198337475902,0,0,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0,0,0,0,0.101839363850316,2.36373244159177,17.1851475734899,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,10.2429822724977,4.49565963328025,0,0,0,0.80673409849337,3.11329261382818,3.04361001780095,2.84717436926707,5.10566759644434,3.2673577144035,4.77495532898762,2.33956904542944,2.69645822596266,3.6743468478698,2.98711909881551,0,0.228497025219458,0,1.62921062276251,0.387904974335251,1.82353131714828,0.758838445491087,0.738050739898011,0.941992367048249,1.1105744752962,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0,3.6179961043551,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0.220528398054962,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0.299033092087958,0,0,0.129159823477731,0,0.58678619322877,0.13020438484395,0.524296722128554,1.20792060413003,1.15212002503146,0,0.202725215290164,0,0,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0,0.375364950902364,0,0.857473516316263,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,6.63053274514786,5.91499011206397,22.6848158480123,22.0394121176393,0.33575854382378,0.934450562382103,0,0,0,0.171217968225505,0.0797721589953364,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,1.27993938234725,0.45881856213434,5.16808767703518,1.29228598847722,1.72376986148711,6.46079626151671,6.80481350351813,1.77384408524244,0,0,0,2.02196133825892,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.662605622854841,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,1.76777151284201,0.711858403995515,0.559198337475902,0,0,1.15945795480671,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0,0,0,0,0.101839363850316,2.36373244159177,17.1851475734899,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,10.2429822724977,4.49565963328025,0,0,0,0.80673409849337,3.11329261382818,3.04361001780095,2.84717436926707,5.10566759644434,3.2673577144035,4.77495532898762,2.33956904542944,2.69645822596266,3.6743468478698,2.98711909881551,0,0.228497025219458,0,1.62921062276251,0.387904974335251,1.82353131714828,0.758838445491087,0.738050739898011,0.941992367048249,1.1105744752962,0,0,0,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0.81443479676788,0.164970122972535,0,0.242780636154981,0,0,0,0,3.6179961043551,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0.220528398054962,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.648074866458964,0,0,0.299033092087958,0,0,0.129159823477731,0,0.58678619322877,0.13020438484395,0.524296722128554,1.20792060413003,1.15212002503146,0,0.202725215290164,0,0,0.179026695667481,0,0,0.147689527174577,0.201932899896295,0,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0,0.375364950902364,0,0.857473516316263,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.888986911206461,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.287177344778066,0,0.231768651889711,0,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p3@Slc35f2 | |||
}} | }} |
Latest revision as of 20:24, 26 September 2015
Short description: | p3@Slc35f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc35f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 111bp_to_ENSMUST00000048670, NM_028060, uc009pmn.2_5end |
EntrezGene: | Slc35f2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.24e-09 | 9 |
epithelial cell of alimentary canal | 1.24e-09 | 9 |
epithelial cell | 9.21e-08 | 25 |
M cell of gut | 1.71e-07 | 3 |
brush border epithelial cell | 1.89e-07 | 6 |
gut absorptive cell | 1.89e-07 | 6 |
enterocyte | 1.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.40e-37 | 31 |
gastrointestinal system | 7.34e-23 | 47 |
mucosa | 3.59e-18 | 15 |
intestinal mucosa | 6.99e-18 | 13 |
wall of intestine | 6.99e-18 | 13 |
gastrointestinal system mucosa | 6.99e-18 | 13 |
organ component layer | 1.92e-10 | 24 |
small intestine | 2.08e-10 | 4 |
epithelium of mucosa | 1.24e-09 | 9 |
gastrointestinal system epithelium | 1.24e-09 | 9 |
intestinal epithelium | 1.24e-09 | 9 |
ileal mucosa | 3.42e-08 | 3 |
ileum | 3.42e-08 | 3 |
mucosa of small intestine | 3.42e-08 | 3 |
wall of small intestine | 3.42e-08 | 3 |
simple columnar epithelium | 9.76e-08 | 11 |
digestive system | 1.67e-07 | 116 |
digestive tract | 1.67e-07 | 116 |
primitive gut | 1.67e-07 | 116 |
endoderm-derived structure | 2.80e-07 | 118 |
endoderm | 2.80e-07 | 118 |
presumptive endoderm | 2.80e-07 | 118 |
subdivision of digestive tract | 6.00e-07 | 114 |