FFCP PHASE1:Mm9::chr9:53619507..53619589,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72022 | |EntrezGene=72022 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TML3 | |UniProt=Q7TML3 | ||
|association_with_transcript=165bp_to_ENSMUST00000048670,NM_028060,uc009pmn.2_5end | |association_with_transcript=165bp_to_ENSMUST00000048670,NM_028060,uc009pmn.2_5end | ||
|cluster_id=chr9:53619507..53619589,+ | |||
|description=CAGE_peak_1_at_Slc35f2_5end | |description=CAGE_peak_1_at_Slc35f2_5end | ||
|id=chr9:53619507..53619589,+ | |id=chr9:53619507..53619589,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.37e-07,9;CL:0002251,8.37e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.28e-11!43;UBERON:0005409!3.31e-10!59;UBERON:0000344!5.05e-10!15;UBERON:0001242!3.86e-09!13;UBERON:0000060!3.86e-09!13;UBERON:0001262!3.86e-09!13;UBERON:0004786!3.86e-09!13;UBERON:0000489!2.98e-08!21;UBERON:0000064!1.67e-07!99;UBERON:0004923!5.77e-07!24;UBERON:0003133!7.24e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.84e-18,31;UBERON:0005409,2.71e-14,47;UBERON:0000344,1.96e-10,15;UBERON:0001242,1.65e-09,13;UBERON:0001262,1.65e-09,13;UBERON:0004786,1.65e-09,13;UBERON:0000489,1.41e-08,21;UBERON:0003133,3.99e-07,24;UBERON:0003350,8.37e-07,9;UBERON:0004808,8.37e-07,9;UBERON:0001277,8.37e-07,9;UBERON:0004923,9.27e-07,24 | |||
|phase1_expression=2.40223270657191,20.9385244583617,23.2049612088663,44.1597748507972,52.5940516443665,7.72244650794693,7.70921713965235,7.10178278928669,17.1762241025033,26.2152269480633,38.8664787871896,31.7493192801439,4.10881751834894,5.15780374272085,0.999329285446988,1.01237633694913,0.699561878128147,3.78554598429885,1.91960207048034,3.39511721438424,3.14660173558958,3.17731043842833,3.91799683708403,9.27956052201759,8.71755268055246,17.2269589234506,14.2151458732495,12.0663890304098,38.3847307301875,31.7557963497513,16.1863272778372,0,0,0,15.8868390863201,19.1169842162266,14.7001936508906,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,2.01339127269284,3.62681071005672,9.07453257684653,0.257259436035947,0,0,2.83243045203437,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,0,2.69592992002042,3.37514845829227,3.15487442027073,6.28432165688368,9.05561017901615,2.44981598429908,2.97120960156533,0.919218786610021,3.30347642998166,2.55374676170375,0.768032666281217,2.2420668914133,2.92760459527711,1.56274011167028,3.35019598801657,1.68828783009504,4.12555268997387,7.07108605136802,7.54569908235246,7.08317894136142,0.227178579999552,0.0755715601067855,2.31891590961342,0,0,0,0.649776417447669,0.448026887097336,2.38755514223978,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,4.79572294820052,10.3575153458869,2.07818994690755,1.90833859442749,2.13125834818499,2.07553947530453,0.452167921657868,0.705532242814229,1.0053327306374,0.741584903203122,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,5.59175283654366,0.878342391034642,0.83778682725382,23.5020490791904,2.63593273913025,2.99951365496704,1.90605340609597,2.69623150928681,1.37250180845588,7.66491547888473,3.30266208365325,2.30143911597297,0.83115217823824,2.27137768294861,3.46253837091075,5.59831367745419,36.6447999728828,0.841767423545896,2.08192708740326,0.689706313300419,0.360124259610698,1.35634336052144,0.612328492361951,0.896796041993948,0.749613796477831,0.776110112217047,4.52692785158969,2.45837904218165,1.58356011747554,1.31517439456545,1.94633074457919,1.74126083261083,0.823128545631774,1.99034266818493,1.40442637462647,0.772043721344145,0.284163499395593,0,0.703578179943289,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,6.79170441703277,42.2936042219261,23.2716498663919,2.13288250535234,3.94802342162745,6.18563814346048,9.27744213267376,10.0070119730192,12.7451169495415,26.0990983849481,16.7992933818491,13.5721012752146,16.7123436514567,11.8928093142663,14.3811105384675,20.533114738096,23.4986702440153,3.41402221715547,3.88444942873078,5.63538678365402,4.48032921259691,5.04276466635827,7.01358198903186,7.90456714053216,8.56138858281692,8.63493003127561,11.4759362447274,0,0.500535317148282,0.393117990226406,0.224862112384854,0,1.20588579876208,0.763877555344259,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,1.01031551178845,0.538192240565737,0,1.47802552133284,0.947457058852424,1.62964976442026,3.05541154395339,3.05097322775053,0.837531287209079,0.238043640886014,0,0.315270288212382,0.664394068946325,0.159454768657487,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.275936746304732,3.85321415970701,3.04750385139728,0,0,0.631016438832513,0.390438744296638,0,0.477937595905104,0,0,0,0.292255857911312,0,2.57057053137446,3.54850213020672,5.87616492101942,5.53815661802159,3.29940245945071,0,1.94224508923985,2.41858845571801,1.50884063804718,1.18120757152309,0.614870295887855,4.65170927702798,1.45413491791002,1.42598951353889,1.26414703174326,1.05418608574999,0,0,1.8006109403131,2.06973894052407,1.07168517515796,0.532020700926821,0.356737635204141,0.493647061806363,0,6.10146440965647,7.41412248023371,0.882113592219848,2.30840754118072,1.13025098687134,1.68876189798836,2.86493625607528,3.44695889464629,19.8206968908299,3.52308073819968,2.22132145037209,2.06386867963222,0.370389054739423,1.50694765603753,1.0935538217682,0.686334519619568,7.13909405974192,6.15786390224095,7.04819866402561,1.90934123603023,1.58167996790568,1.82987520414164,2.70013352054503,2.92723614420256,3.49380101993884,3.37160865962052,3.2234847732881,1.57053565190418,9.98035294346805,0.621339313086926,3.94585057078933,4.48549638131936,4.46737924234164,1.55560950675238,3.09983576346555,2.19642963138012,4.22486059124714,10.6767595572039,9.85677837601682,7.9722759872582,9.50499020650956,4.10814456816632,1.62180172232131,2.67048488628551,3.63778304337826,3.40150721768215,4.76835251475036,6.73094517311826,6.05527061415767,6.5628192466296,7.08723301891499,5.04130925684203,4.97035191772737,6.83104075646339,4.55819918508119,2.26730383615211,4.88369097422942,7.08739467214858,2.01461539636894,4.056981474676,3.19060208267009,3.84618410961257,5.14484109789758,11.5361583928134,1.12950368523413,3.22227665555024,1.14579102687879,2.92150409984269,0,0.755393897389701,2.02506750069542,0.900642406448441,2.71885445390523,1.03552062350364,0.415149390336707,0.399024873401031,1.19513524027894,2.43106717068294,1.25767897576789,1.2869045591501,1.77797382241292,2.67845574410562,3.20919209591815,1.76888048234658,2.5347929989024,2.82939512079114,1.31098110457835,1.47257850531199,2.1825478203133,1.42888107384922,1.97003354106254,2.31491064556446,2.06042950401653,2.06078488188156,1.71434626192708,2.66213709239006,1.1921809497366,1.30811774969096,2.1645157495526,2.70766745253365,1.64635175585495,1.8414879800649,2.03706170768793,2.24456908663095,1.54225523561426,2.1670986122624,1.22769312950907,1.54936841185966,1.92906610981141,3.74715866906919,2.57324769289949,2.36358159453128,0.57386499620653,1.10295709559758,0.463735671240843 | |phase1_expression=2.40223270657191,20.9385244583617,23.2049612088663,44.1597748507972,52.5940516443665,7.72244650794693,7.70921713965235,7.10178278928669,17.1762241025033,26.2152269480633,38.8664787871896,31.7493192801439,4.10881751834894,5.15780374272085,0.999329285446988,1.01237633694913,0.699561878128147,3.78554598429885,1.91960207048034,3.39511721438424,3.14660173558958,3.17731043842833,3.91799683708403,9.27956052201759,8.71755268055246,17.2269589234506,14.2151458732495,12.0663890304098,38.3847307301875,31.7557963497513,16.1863272778372,0,0,0,15.8868390863201,19.1169842162266,14.7001936508906,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0.279972843250725,0,2.01339127269284,3.62681071005672,9.07453257684653,0.257259436035947,0,0,2.83243045203437,3.70293685490423,1.90149421051854,0,0,0,0,0,0.299600110518405,0,2.69592992002042,3.37514845829227,3.15487442027073,6.28432165688368,9.05561017901615,2.44981598429908,2.97120960156533,0.919218786610021,3.30347642998166,2.55374676170375,0.768032666281217,2.2420668914133,2.92760459527711,1.56274011167028,3.35019598801657,1.68828783009504,4.12555268997387,7.07108605136802,7.54569908235246,7.08317894136142,0.227178579999552,0.0755715601067855,2.31891590961342,0,0,0,0.649776417447669,0.448026887097336,2.38755514223978,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,4.79572294820052,10.3575153458869,2.07818994690755,1.90833859442749,2.13125834818499,2.07553947530453,0.452167921657868,0.705532242814229,1.0053327306374,0.741584903203122,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,5.59175283654366,0.878342391034642,0.83778682725382,23.5020490791904,2.63593273913025,2.99951365496704,1.90605340609597,2.69623150928681,1.37250180845588,7.66491547888473,3.30266208365325,2.30143911597297,0.83115217823824,2.27137768294861,3.46253837091075,5.59831367745419,36.6447999728828,0.841767423545896,2.08192708740326,0.689706313300419,0.360124259610698,1.35634336052144,0.612328492361951,0.896796041993948,0.749613796477831,0.776110112217047,4.52692785158969,2.45837904218165,1.58356011747554,1.31517439456545,1.94633074457919,1.74126083261083,0.823128545631774,1.99034266818493,1.40442637462647,0.772043721344145,0.284163499395593,0,0.703578179943289,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,3.78521907415429,6.79170441703277,42.2936042219261,23.2716498663919,2.13288250535234,3.94802342162745,6.18563814346048,9.27744213267376,10.0070119730192,12.7451169495415,26.0990983849481,16.7992933818491,13.5721012752146,16.7123436514567,11.8928093142663,14.3811105384675,20.533114738096,23.4986702440153,3.41402221715547,3.88444942873078,5.63538678365402,4.48032921259691,5.04276466635827,7.01358198903186,7.90456714053216,8.56138858281692,8.63493003127561,11.4759362447274,0,0.500535317148282,0.393117990226406,0.224862112384854,0,1.20588579876208,0.763877555344259,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,1.01031551178845,0.538192240565737,0,1.47802552133284,0.947457058852424,1.62964976442026,3.05541154395339,3.05097322775053,0.837531287209079,0.238043640886014,0,0.315270288212382,0.664394068946325,0.159454768657487,0.327726629431476,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0.275936746304732,3.85321415970701,3.04750385139728,0,0,0.631016438832513,0.390438744296638,0,0.477937595905104,0,0,0,0.292255857911312,0,2.57057053137446,3.54850213020672,5.87616492101942,5.53815661802159,3.29940245945071,0,1.94224508923985,2.41858845571801,1.50884063804718,1.18120757152309,0.614870295887855,4.65170927702798,1.45413491791002,1.42598951353889,1.26414703174326,1.05418608574999,0,0,1.8006109403131,2.06973894052407,1.07168517515796,0.532020700926821,0.356737635204141,0.493647061806363,0,6.10146440965647,7.41412248023371,0.882113592219848,2.30840754118072,1.13025098687134,1.68876189798836,2.86493625607528,3.44695889464629,19.8206968908299,3.52308073819968,2.22132145037209,2.06386867963222,0.370389054739423,1.50694765603753,1.0935538217682,0.686334519619568,7.13909405974192,6.15786390224095,7.04819866402561,1.90934123603023,1.58167996790568,1.82987520414164,2.70013352054503,2.92723614420256,3.49380101993884,3.37160865962052,3.2234847732881,1.57053565190418,9.98035294346805,0.621339313086926,3.94585057078933,4.48549638131936,4.46737924234164,1.55560950675238,3.09983576346555,2.19642963138012,4.22486059124714,10.6767595572039,9.85677837601682,7.9722759872582,9.50499020650956,4.10814456816632,1.62180172232131,2.67048488628551,3.63778304337826,3.40150721768215,4.76835251475036,6.73094517311826,6.05527061415767,6.5628192466296,7.08723301891499,5.04130925684203,4.97035191772737,6.83104075646339,4.55819918508119,2.26730383615211,4.88369097422942,7.08739467214858,2.01461539636894,4.056981474676,3.19060208267009,3.84618410961257,5.14484109789758,11.5361583928134,1.12950368523413,3.22227665555024,1.14579102687879,2.92150409984269,0,0.755393897389701,2.02506750069542,0.900642406448441,2.71885445390523,1.03552062350364,0.415149390336707,0.399024873401031,1.19513524027894,2.43106717068294,1.25767897576789,1.2869045591501,1.77797382241292,2.67845574410562,3.20919209591815,1.76888048234658,2.5347929989024,2.82939512079114,1.31098110457835,1.47257850531199,2.1825478203133,1.42888107384922,1.97003354106254,2.31491064556446,2.06042950401653,2.06078488188156,1.71434626192708,2.66213709239006,1.1921809497366,1.30811774969096,2.1645157495526,2.70766745253365,1.64635175585495,1.8414879800649,2.03706170768793,2.24456908663095,1.54225523561426,2.1670986122624,1.22769312950907,1.54936841185966,1.92906610981141,3.74715866906919,2.57324769289949,2.36358159453128,0.57386499620653,1.10295709559758,0.463735671240843 | ||
|short_description=p1@Slc35f2 | |short_description=p1@Slc35f2 | ||
}} | }} |
Latest revision as of 20:24, 26 September 2015
Short description: | p1@Slc35f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc35f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 165bp_to_ENSMUST00000048670, NM_028060, uc009pmn.2_5end |
EntrezGene: | Slc35f2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.37e-07 | 9 |
epithelial cell of alimentary canal | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.84e-18 | 31 |
gastrointestinal system | 2.71e-14 | 47 |
mucosa | 1.96e-10 | 15 |
intestinal mucosa | 1.65e-09 | 13 |
wall of intestine | 1.65e-09 | 13 |
gastrointestinal system mucosa | 1.65e-09 | 13 |
cavitated compound organ | 1.41e-08 | 21 |
reproductive organ | 3.99e-07 | 24 |
epithelium of mucosa | 8.37e-07 | 9 |
gastrointestinal system epithelium | 8.37e-07 | 9 |
intestinal epithelium | 8.37e-07 | 9 |
organ component layer | 9.27e-07 | 24 |