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FFCP PHASE2:Mm9::chr9:56008805..56008852,-: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:56434 |HGNC= |MCL_coexpression_id=1032 |TSSclassifier=NA |UniProt=uniprot:Q9QY33,uniprot:Q545L1,uniprot:Q80XR4 |ass...")
 
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|DHSsupport=NA
|DHSsupport=NA
|DPIdataset=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56434
|EntrezGene=56434
|HGNC=
|HGNC=
|MCL_coexpression_id=1032
|MCL_coexpression_id=1032
|TSSclassifier=NA
|TSSclassifier=NA
|UniProt=uniprot:Q9QY33,uniprot:Q545L1,uniprot:Q80XR4
|UniProt=Q9QY33,Q545L1,Q80XR4
|association_with_transcript=24bp_to_ENSMUST00000034876,NM_019793,uc009psx.2,uc009psy.2_5end
|association_with_transcript=24bp_to_ENSMUST00000034876,NM_019793,uc009psx.2,uc009psy.2_5end
|cluster_id=chr9:56008805..56008852,-
|cluster_id=chr9:56008805..56008852,-

Latest revision as of 21:03, 26 September 2015

Short description:p1@Tspan3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tspan3_5end
Coexpression cluster:MCL_coexpression_mm9:1032
Association with transcript: 24bp_to_ENSMUST00000034876, NM_019793, uc009psx.2, uc009psy.2_5end
EntrezGene:Tspan3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Tspan3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7103.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5818.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61058.78
CD326+ enterocyte, pool1.CNhs13542.11848-124I3404.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I4435.78
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7223.95
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8262.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.05
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.54
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.33
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1549.89
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2805.23
GP2+ M cell, pool1.CNhs13228.11845-124H9924.51
GP2+ M cell, pool2.CNhs13231.11846-124I1710.76
GP2+ M cell, pool3.CNhs13240.11847-124I2556.99
Ileum epithelium, pool1.CNhs13199.10252-104B9770.93
Ileum epithelium, pool2.CNhs13232.10253-104C1314.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8511.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5104.28
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6126.84
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F797.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D899.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D998.44
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B393.43
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7118.92
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2504.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8428.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3438.24
Mouse Astrocytes, donor2.CNhs12078.11552-120C4172.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C4475.82
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C157.88
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E163.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5103.13
Mouse Granule cells, donor1.CNhs12131.11713-123C380.72
Mouse Granule cells, donor2.CNhs12357.11731-123E388.87
Mouse Granule cells, donor3.CNhs12108.11636-122C7108.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C684.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D198.71
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.19
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D242.63
Mouse Microglia, donor1.CNhs12629.11718-123C8239.68
Mouse Microglia, donor2.CNhs12634.11736-123E8361.93
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D556.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F557.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D959.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1148.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5144.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D258.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F253.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D680.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3212.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3160.25
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7155.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D480.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F468.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D866.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4187.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5176.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6164.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D699.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F698.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E171.58
Mouse Schwann, donor1.CNhs12507.11728-123D945.28
Mouse Schwann, donor2.CNhs12573.11746-123F9101.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G318.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A754.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.47
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I849.11
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6163.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H147.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G238.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.86
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B659.15
accessory axillary lymph node, adult.CNhs10475.1063-29H944.28
adrenal gland, adult.CNhs10508.49-24D745.87
adrenal gland, embryo E14.CNhs11038.406-44C549.96
adrenal gland, embryo E16.CNhs11004.1254-43D647.80
adrenal gland, embryo E17.CNhs11043.1263-45I138.74
adrenal gland, embryo E18.CNhs11026.1262-18F540.09
adrenal gland, neonate N00.CNhs11191.1311-23C127.28
adrenal gland, neonate N25.CNhs11223.1377-27I343.10
amnion, adult pregnant day17.5.CNhs10488.583-22A820.76
aorta, adult.CNhs10498.46-23H162.61
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F570.53
bone (os femoris), neonate N16.CNhs11225.1525-43A637.98
bone (os femoris), neonate N20.CNhs11195.1350-25C349.46
cecum, adult.CNhs10467.37-13H4277.72
cerebellum, adult.CNhs10494.15-8B273.20
cerebellum, neonate N30.CNhs11135.1395-42I280.64
colon, adult.CNhs10468.36-18H7241.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.37
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.03
corpora quadrigemina, adult.CNhs10501.16-22A4131.37
corpus striatum, adult.CNhs10487.19-21D887.38
corpus striatum, neonate N00.CNhs11226.630-43F155.04
cortex, adult.CNhs10473.12-14D580.48
cortex, neonate N30.CNhs11107.1392-42F299.73
diencephalon, adult.CNhs10482.20-12F2114.49
diencephalon, neonate N30.CNhs11201.1388-42B2125.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B153.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A251.88
epididymis, adult.CNhs10490.58-23B2125.35
eyeball, adult.CNhs10484.31-12G425.46
eyeball, embryo E12.CNhs11016.345-16C644.37
eyeball, embryo E14.CNhs10521.399-16E266.90
eyeball, embryo E15.CNhs10593.426-16C955.46
eyeball, embryo E17.CNhs11023.1261-18D451.69
eyeball, neonate N00.CNhs11207.633-15C650.82
eyeball, neonate N01.CNhs11140.1532-43E751.50
eyeball, neonate N02.CNhs11205.1551-44G855.10
eyeball, neonate N16.CNhs11188.777-19A248.38
forelimb, embryo E11.CNhs10596.335-25E251.74
forelimb, embryo E12.CNhs10600.359-14H249.73
forelimb, embryo E13.CNhs10589.384-1E245.75
forelimb, embryo E14.CNhs10577.413-26A853.48
forelimb, embryo E15.CNhs11007.437-20E738.93
forelimb, embryo E17.CNhs10598.1517-43C453.28
forelimb, embryo E18.CNhs11008.1520-43B539.10
gonad, embryo E13.CNhs11044.1564-45I646.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E954.27
heart, embryo E12.CNhs11015.353-12F547.61
heart, embryo E13.CNhs11013.376-3I958.52
heart, embryo E14.CNhs10597.403-26D462.97
heart, embryo E15.CNhs11017.431-16C852.14
heart, embryo E16.CNhs11021.457-17C651.22
heart, embryo E17.CNhs11025.479-18E551.16
heart, embryo E18.CNhs11030.1283-20G355.26
heart, neonate N00.CNhs11213.639-21E342.74
heart, neonate N03.CNhs11221.1349-25I265.66
heart, neonate N10.CNhs11118.749-24G161.40
heart, neonate N16.CNhs11209.782-15G157.56
heart, neonate N20.CNhs11127.821-26I671.35
heart, neonate N25.CNhs11196.1351-25D365.65
heart, neonate N30.CNhs11202.1390-42D267.64
hippocampus, adult.CNhs10478.13-16E890.42
hippocampus, neonate N00.CNhs11228.627-43G159.89
intestinal mucosa, adult.CNhs10506.860-29I3476.13
intestine, adult.CNhs10496.178-9A3203.63
intestine, embryo E12.CNhs11019.1251-16I544.36
intestine, embryo E13.CNhs11010.381-16D539.02
intestine, embryo E15.CNhs10602.976-16D853.74
intestine, embryo E16.CNhs10585.463-22H465.95
intestine, embryo E17.CNhs10582.482-18D357.15
intestine, embryo E18.CNhs10526.1289-20F776.66
intestine, neonate N00.CNhs11126.644-26D1213.54
intestine, neonate N01.CNhs11192.1322-23E980.04
intestine, neonate N06.CNhs11102.688-20B895.26
intestine, neonate N07.CNhs11095.720-20F298.48
intestine, neonate N10.CNhs11098.755-23A5102.94
intestine, neonate N20.CNhs11187.827-18D1177.07
intestine, neonate N25.CNhs11121.1352-25E3240.56
intestine, neonate N30.CNhs11131.1384-42G1261.27
kidney, embryo E14.CNhs10606.411-4I958.80
kidney, embryo E15.CNhs10997.434-16F841.36
kidney, embryo E16.CNhs10584.464-22A549.59
kidney, embryo E17.CNhs11028.483-18I249.69
kidney, embryo E18.CNhs11001.1288-20C743.83
kidney, neonate N00.CNhs11214.646-21G741.17
kidney, neonate N10.CNhs11206.758-6D575.57
kidney, neonate N20.CNhs11113.832-19I1104.51
kidney, neonate N25.CNhs11122.1353-25F3139.73
kidney, neonate N30.CNhs11203.1385-42H1156.47
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H612.38
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F48.43
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H218.23
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B127.90
lung, embryo E12.CNhs10522.354-16G257.79
lung, embryo E14.CNhs10604.404-26F855.90
lung, embryo E15.CNhs11020.432-17C547.36
lung, embryo E16.CNhs10998.458-17B648.11
lung, embryo E17.CNhs10605.480-44A645.73
lung, embryo E18.CNhs10583.1287-20I632.61
lung, neonate N00.CNhs11224.640-42C623.61
lung, neonate N06.CNhs11212.683-20E533.26
lung, neonate N07.CNhs11111.715-19A334.77
lung, neonate N10.CNhs11219.750-23E645.92
lung, neonate N20.CNhs11109.822-18A427.86
lung, neonate N25.CNhs11119.1359-25C735.57
lung, neonate N30.CNhs11133.1394-42H231.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1150.12
mammary gland, adult lactating day02.CNhs10480.595-22B657.04
mammary gland, adult pregnant day19.CNhs10476.588-5H222.63
medulla oblongata, adult.CNhs10477.17-12C2139.84
medulla oblongata, neonate N30.CNhs11200.1396-42A3134.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C741.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C291.90
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E187.08
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E286.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E394.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D777.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D874.41
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D962.84
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D470.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D573.36
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D677.48
olfactory brain, adult.CNhs10489.18-22I969.08
ovary, adult.CNhs10507.91-2I741.45
ovary, embryo E18.CNhs11040.505-44H766.42
ovary, neonate N00.CNhs11217.1299-22I450.82
oviduct, adult pregnant day01.CNhs10500.988-6G632.50
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F440.30
pancreas, embryo E15.CNhs11042.1556-45F240.21
pancreas, embryo E16.CNhs11003.460-26E528.29
pancreas, embryo E17.CNhs10599.1558-45G332.19
pancreas, embryo E18.CNhs10580.1535-43I735.66
pancreas, neonate N00.CNhs11105.645-26G940.83
pancreas, neonate N01.CNhs11138.1531-43D742.90
pancreas, neonate N02.CNhs11139.1539-43D836.36
pancreas, neonate N16.CNhs11136.787-43B626.23
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G887.49
pituitary gland, embryo E12.CNhs11018.346-16E652.94
pituitary gland, embryo E13.CNhs11009.370-44C766.23
pituitary gland, embryo E14.CNhs11037.398-44A567.30
pituitary gland, embryo E15.CNhs10592.427-16B961.71
pituitary gland, embryo E16.CNhs11036.449-43F668.14
pituitary gland, embryo E17.CNhs11039.1265-44F579.15
pituitary gland, neonate N00.CNhs11190.1308-22E955.11
placenta, adult pregnant day10.CNhs10472.539-13I715.25
placenta, adult pregnant day17.CNhs10464.577-18G362.28
prostate, adult.CNhs10470.859-1F822.05
skin, adult.CNhs10492.30-1C328.86
skin, neonate N00.CNhs11124.650-25G429.71
skin, neonate N03.CNhs11215.662-22H332.03
skin, neonate N06.CNhs11097.693-20I543.69
skin, neonate N10.CNhs11108.762-6C462.54
small intestine, neonate N16.CNhs11114.790-21I1128.54
spinal cord, adult.CNhs10505.24-13C9133.69
spleen, adult.CNhs10465.25-2G215.21
spleen, embryo E16.CNhs11035.461-43C141.07
spleen, embryo E18.CNhs11011.1271-21F220.93
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H19.84
spleen, neonate N25.CNhs11099.1354-25G313.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.36
stomach, adult.CNhs10503.33-1H663.96
stomach, embryo E12.CNhs10588.356-43E352.35
stomach, embryo E15.CNhs10603.1252-16G850.02
stomach, embryo E16.CNhs11022.459-17D454.43
stomach, embryo E17.CNhs11006.1035-18D561.26
stomach, embryo E18.CNhs10999.1286-20C656.12
stomach, neonate N03.CNhs11193.1340-24B862.58
stomach, neonate N07.CNhs11210.718-18A961.33
stomach, neonate N25.CNhs11104.1355-25E460.20
stomach, neonate N30.CNhs11134.1386-42I1509.65
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F536.18
testis, embryo E15.CNhs11034.443-27C546.33
testis, embryo E16.CNhs11033.470-26G548.22
testis, embryo E17.CNhs11029.486-18I546.63
testis, embryo E18.CNhs11027.503-18G545.79
testis, neonate N00.CNhs11189.1300-22B738.26
testis, neonate N07.CNhs11222.726-26I443.62
testis, neonate N10.CNhs11204.763-44D924.75
testis, neonate N20.CNhs11110.839-18H314.74
testis, neonate N30.CNhs11130.1391-42E226.79
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I441.36
thymus, embryo E15.CNhs11005.430-45I229.99
thymus, embryo E16.CNhs11002.456-26C521.70
thymus, embryo E17.CNhs10581.478-18C122.38
thymus, embryo E18.CNhs10595.1273-19G421.85
thymus, neonate N02.CNhs11181.1541-43F818.51
thymus, neonate N03.CNhs11137.2104-43C721.41
thymus, neonate N06.CNhs11197.681-26C415.85
thymus, neonate N07.CNhs11211.713-19D315.93
thymus, neonate N10.CNhs11194.748-24E413.81
thymus, neonate N20.CNhs11186.820-7A215.69
thymus, neonate N25.CNhs11125.1362-25G716.55
thymus, neonate N30.CNhs11132.1393-42G217.30
tongue, adult.CNhs10499.32-1B451.69
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H336.18
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E446.56
uterus, adult pregnant day19.CNhs10497.590-15F526.65
uterus, adult.CNhs10509.92-27E524.36
vagina, adult.CNhs10502.89-27D531.08
vesicular gland, adult.CNhs10491.51-27F834.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A177.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A284.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A384.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D776.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A484.95
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A583.85
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A691.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A780.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A884.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.68
whole body, embryo E11.CNhs11014.324-5I817.54
whole body, embryo E12.CNhs10587.857-27C951.47
whole body, embryo E13.CNhs10512.372-23H250.20
whole body, embryo E14.5.CNhs10578.420-27D234.76
whole body, embryo E14.CNhs10519.395-14B118.45
whole body, embryo E16.CNhs10514.453-14F220.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G543.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G552.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G552.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G541.57
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G546.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G540.92
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G541.36
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G542.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G543.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G549.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G551.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G542.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G544.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G548.98
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G542.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G546.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G544.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G548.14
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G540.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G548.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G540.75
whole body, embryo E17.5.CNhs10513.490-9F945.72
whole body, embryo E17.CNhs10517.475-3I559.21
whole body, embryo E18.CNhs10516.493-3B355.44
whole body, neonate N00.CNhs10525.657-19C240.18
whole body, neonate N01.CNhs10576.659-23C652.99
whole body, neonate N06.CNhs10515.692-21D171.69
whole body, neonate N10.CNhs10518.761-6B469.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.61e-1444
neurectodermal cell1.61e-1444
neural cell5.20e-1443
embryonic cell2.06e-1370
electrically responsive cell4.13e-1139
electrically active cell4.13e-1139
neuron1.37e-0933
neuronal stem cell1.37e-0933
neuroblast1.37e-0933
electrically signaling cell1.37e-0933
CNS neuron (sensu Vertebrata)2.49e-0723
neuroblast (sensu Vertebrata)2.49e-0723

Uber anatomy
Ontology termp-valuen
nervous system1.24e-2275
central nervous system1.73e-2273
ectoderm-derived structure1.91e-1895
ectoderm1.91e-1895
presumptive ectoderm1.91e-1895
regional part of nervous system1.58e-1554
structure with developmental contribution from neural crest1.40e-1492
neural tube1.87e-1452
neural rod1.87e-1452
future spinal cord1.87e-1452
neural keel1.87e-1452
neurectoderm3.04e-1464
neural plate3.04e-1464
presumptive neural plate3.04e-1464
ecto-epithelium4.62e-1373
intestine7.80e-1331
brain2.64e-1247
future brain2.64e-1247
regional part of brain3.90e-1246
mucosa4.59e-1015
anterior neural tube7.70e-1040
gray matter1.87e-0934
regional part of forebrain1.99e-0939
forebrain1.99e-0939
future forebrain1.99e-0939
gastrointestinal system5.63e-0947
pre-chordal neural plate7.35e-0949
intestinal mucosa1.00e-0813
wall of intestine1.00e-0813
gastrointestinal system mucosa1.00e-0813
brain grey matter9.92e-0829
regional part of telencephalon9.92e-0829
telencephalon9.92e-0829
simple columnar epithelium4.84e-0711
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