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FFCP PHASE1:Mm9::chr12:84828663..84828679,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70127
|EntrezGene=70127
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P58269,B5TZD5
|UniProt=P58269,B5TZD5
|association_with_transcript=-5bp_to_NM_058212,uc007odc.1,uc007odd.1,uc007ode.1_5end
|association_with_transcript=-5bp_to_NM_058212,uc007odc.1,uc007odd.1,uc007ode.1_5end
|cluster_id=chr12:84828663..84828679,-
|description=CAGE_peak_1_at_Dpf3_5end
|description=CAGE_peak_1_at_Dpf3_5end
|id=chr12:84828663..84828679,-
|id=chr12:84828663..84828679,-
|ontology_enrichment_celltype=CL:0000540!4.86e-08!33;CL:0000047!4.86e-08!33;CL:0000031!4.86e-08!33;CL:0000404!4.86e-08!33;CL:0000117!7.03e-07!23;CL:0000337!7.03e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,4.42e-08,33;CL:0000047,4.42e-08,33;CL:0000031,4.42e-08,33;CL:0000404,4.42e-08,33;CL:0000117,6.49e-07,23;CL:0000337,6.49e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.55e-09,92
|phase1_expression=15.2141404749554,17.0997949743287,14.1049764210756,40.5302043151152,29.0519523368881,6.5472916045637,4.67225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.174840804837995,13.9906099962578,20.2475267389826,30.7807226376385,0.157731082679119,0,0.84877930359606,8.1641558545027,0.893618560807968,0.522399578277871,1.75991665072747,2.06468352960453,9.76194338995534,11.1998119001359,9.48073423817912,10.4512880701006,15.1218077855958,6.65191531965914,22.2260735710871,12.916360539276,15.8481681015439,2.3108129580102,2.1610503896604,1.83752420636132,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,1.52617609466313,2.19686182734472,1.36100929351998,0.839918529752175,0,0.167782606057736,0,0.336093799142464,0,0,0,45.3188872325499,49.7251520515711,36.7622214033584,0,0,0,0,0,1.79760066311043,1.92109152660777,10.6800300677732,14.9856591548177,12.1988477583802,15.7108041422092,17.2277461942259,8.08439274818697,5.94241920313065,2.75765635983006,15.4162233399144,7.66124028511126,7.52672012955593,37.1919331399147,28.0867065859398,31.7757156039624,12.2840519560608,7.87867654044352,6.57032465440283,25.3380583507354,24.6303007782448,30.9423080069999,0.37863096666592,0.226714680320357,7.24661221754194,2.58127163094416,0.679971333707751,4.31762553310254,5.19821133958135,4.92829575807069,10.8142203501449,0,0,0,21.4081998060554,2.56652954828636,5.09610479413291,0,0,0,0,6.05174562511018,0.776813650941515,12.4691396814453,7.63335437770998,7.00270600117925,7.61031140944993,12.0578112442098,9.99504010653491,6.6603293404728,36.0904652892186,10.1219549843938,14.153768831198,8.57364304721269,13.9130156630048,10.1823803158397,13.0474232852686,76.4157880200138,83.778682725382,6.38642638021478,1.07833612055328,0,1.14363204365758,7.18995069143149,4.11750542536764,6.53402630986895,6.08385120672968,3.06858548796397,5.40248915854856,4.86723789203273,1.73126918545538,8.45967400148633,1.26361379216837,33.8811387977223,13.0120442962704,12.8745178482745,12.0641626969584,16.1254155084215,21.9757892258789,28.185018462667,25.2057639065671,62.3475123481028,2.15567992932842,6.61871280587367,4.75068035242662,2.19195732427575,0.556094498451196,4.179025998266,1.64625709126355,12.9372273432021,0,0.51469581422943,0.568326998791185,38.7325194641389,29.315757497637,23.0479438670099,30.5400708904921,24.7922932001729,23.9114024975436,29.7643449280522,25.2176997315642,15.880086561935,18.5952630402233,22.6551100429151,22.7803354823855,29.3861974724918,20.8572609526498,22.1440590954613,17.2437757822584,18.1112117787541,10.2429822724977,2.11560453330835,10.6644125267617,7.43157349953403,6.44337306610467,5.44545516483025,10.0070119730192,5.1360919050391,5.21981967698963,7.24675400785648,5.27803938480566,6.76452004939913,3.31438948102504,11.6846523125049,9.29393614461185,13.9398891278057,7.96605184002943,11.4248512609729,5.63538678365402,7.94240178596726,8.53390943537553,5.19005067188357,8.91635173452028,6.9376769550413,7.69293766422737,5.42947521255922,5.63259991465583,14.181833985868,11.9900987019054,15.5154857545549,10.3458661908136,14.470629585145,14.0044218479781,11.7955416354832,13.1329533687779,12.3552635934637,24.4405951096503,9.30352369171258,9.04909252032226,10.3557339958316,6.99649912735457,15.9206362049911,1.66277871149944,3.41084541186873,2.44447464663039,1.52770577197669,2.11221223459652,3.1826188913945,1.6663054862021,1.95133647857799,1.26108115284953,1.32878813789265,1.43509291791738,1.80249646187312,1.89953480052485,0.578596234326046,0,0,8.85175691434265,6.07060841870411,8.34863067936518,9.25972324078405,0.163934945376675,28.7816857012985,12.6203287766503,17.5697434933487,14.0025208526319,2.38968797952552,3.7875774594007,1.98153571552183,18.6212922770451,23.6727244908163,18.5785255634866,21.5285282002611,19.8716119291576,4.62970569534864,6.18970445543589,1.15479086080775,1.32745138339963,2.6705869977048,0.906970670894253,2.07465587731488,2.36241514304618,2.15204603560749,2.32585463851399,2.90826983582004,2.13898427030833,2.21225730555071,2.10837217149998,1.03135543248187,2.38307724027652,4.14140516272013,2.19909762430683,2.7863814554107,2.12808280370728,2.67553226403106,2.96188237083818,0.913394847343798,10.3255551548033,15.0400770313312,1.32317038832977,4.78170133530292,1.13025098687134,1.26657142349127,1.19372344003136,1.80554989719567,6.41257840585672,6.86073617438886,14.8657666294132,2.47664241555867,3.70389054739423,31.2691638627787,35.4038049797455,26.5382680919566,0,0.139951452323658,0.276399947608848,0,2.53068794864908,5.08298667817122,2.16010681643603,3.55450103224597,3.49380101993884,3.64133735239016,3.30613822901344,3.40282724579238,11.1468877030942,6.21339313086926,1.69107881605257,23.0255480907727,9.92750942742586,5.44463327363333,5.16639293910924,5.06868376472335,4.22486059124714,6.77062801188541,13.421996086491,5.31485065817213,6.91272015018877,0.316011120628178,0.810900861160657,0.616265742988964,1.03936658382236,0.358053391334963,1.19208812868759,0.841368146639782,0.295379054349154,0.807731599585181,0.609654453239999,0.403304740547362,0,0.0962118416403295,0.584384510907845,22.6730383615211,11.3212836220773,3.3194126945506,17.7957693345923,6.76163579112667,1.87682475451182,3.11357761254351,0.214368379079066,0.501572104035363,3.95326289831947,2.30162618253588,2.29158205375759,3.09335728218638,4.11049511862385,4.5323633843382,4.05013500139084,4.95353323546643,1.81256963593682,2.5888015587591,6.43481555021895,9.17757208822371,9.73181552798565,9.72426868273176,8.17491334249131,6.98605332110054,11.7790765734856,7.82933217507798,8.98573786857083,8.33900798820532,9.63221339582911,10.5630751176203,12.5479620009642,12.5489298713544,10.2809489430548,10.0021675169445,10.8931266388164,9.64546102318525,10.3021475200827,9.71512872887022,11.6575545811041,9.76116933876356,9.29901140794552,10.7556348307923,12.4224382148236,9.05376304440939,13.3537420197124,9.99664903463803,13.0371949292027,13.4674145197857,10.202611558679,9.75194375518078,8.18462086339379,9.29621047115796,7.71626443924566,11.4912865851455,7.25187986180766,5.15690529715916,7.07766828654721,7.72069966918304,14.1439379728457
|phase1_expression=15.2141404749554,17.0997949743287,14.1049764210756,40.5302043151152,29.0519523368881,6.5472916045637,4.67225281191051,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0.171200729931206,0.174840804837995,13.9906099962578,20.2475267389826,30.7807226376385,0.157731082679119,0,0.84877930359606,8.1641558545027,0.893618560807968,0.522399578277871,1.75991665072747,2.06468352960453,9.76194338995534,11.1998119001359,9.48073423817912,10.4512880701006,15.1218077855958,6.65191531965914,22.2260735710871,12.916360539276,15.8481681015439,2.3108129580102,2.1610503896604,1.83752420636132,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,1.52617609466313,2.19686182734472,1.36100929351998,0.839918529752175,0,0.167782606057736,0,0.336093799142464,0,0,0,45.3188872325499,49.7251520515711,36.7622214033584,0,0,0,0,0,1.79760066311043,1.92109152660777,10.6800300677732,14.9856591548177,12.1988477583802,15.7108041422092,17.2277461942259,8.08439274818697,5.94241920313065,2.75765635983006,15.4162233399144,7.66124028511126,7.52672012955593,37.1919331399147,28.0867065859398,31.7757156039624,12.2840519560608,7.87867654044352,6.57032465440283,25.3380583507354,24.6303007782448,30.9423080069999,0.37863096666592,0.226714680320357,7.24661221754194,2.58127163094416,0.679971333707751,4.31762553310254,5.19821133958135,4.92829575807069,10.8142203501449,0,0,0,21.4081998060554,2.56652954828636,5.09610479413291,0,0,0,0,6.05174562511018,0.776813650941515,12.4691396814453,7.63335437770998,7.00270600117925,7.61031140944993,12.0578112442098,9.99504010653491,6.6603293404728,36.0904652892186,10.1219549843938,14.153768831198,8.57364304721269,13.9130156630048,10.1823803158397,13.0474232852686,76.4157880200138,83.778682725382,6.38642638021478,1.07833612055328,0,1.14363204365758,7.18995069143149,4.11750542536764,6.53402630986895,6.08385120672968,3.06858548796397,5.40248915854856,4.86723789203273,1.73126918545538,8.45967400148633,1.26361379216837,33.8811387977223,13.0120442962704,12.8745178482745,12.0641626969584,16.1254155084215,21.9757892258789,28.185018462667,25.2057639065671,62.3475123481028,2.15567992932842,6.61871280587367,4.75068035242662,2.19195732427575,0.556094498451196,4.179025998266,1.64625709126355,12.9372273432021,0,0.51469581422943,0.568326998791185,38.7325194641389,29.315757497637,23.0479438670099,30.5400708904921,24.7922932001729,23.9114024975436,29.7643449280522,25.2176997315642,15.880086561935,18.5952630402233,22.6551100429151,22.7803354823855,29.3861974724918,20.8572609526498,22.1440590954613,17.2437757822584,18.1112117787541,10.2429822724977,2.11560453330835,10.6644125267617,7.43157349953403,6.44337306610467,5.44545516483025,10.0070119730192,5.1360919050391,5.21981967698963,7.24675400785648,5.27803938480566,6.76452004939913,3.31438948102504,11.6846523125049,9.29393614461185,13.9398891278057,7.96605184002943,11.4248512609729,5.63538678365402,7.94240178596726,8.53390943537553,5.19005067188357,8.91635173452028,6.9376769550413,7.69293766422737,5.42947521255922,5.63259991465583,14.181833985868,11.9900987019054,15.5154857545549,10.3458661908136,14.470629585145,14.0044218479781,11.7955416354832,13.1329533687779,12.3552635934637,24.4405951096503,9.30352369171258,9.04909252032226,10.3557339958316,6.99649912735457,15.9206362049911,1.66277871149944,3.41084541186873,2.44447464663039,1.52770577197669,2.11221223459652,3.1826188913945,1.6663054862021,1.95133647857799,1.26108115284953,1.32878813789265,1.43509291791738,1.80249646187312,1.89953480052485,0.578596234326046,0,0,8.85175691434265,6.07060841870411,8.34863067936518,9.25972324078405,0.163934945376675,28.7816857012985,12.6203287766503,17.5697434933487,14.0025208526319,2.38968797952552,3.7875774594007,1.98153571552183,18.6212922770451,23.6727244908163,18.5785255634866,21.5285282002611,19.8716119291576,4.62970569534864,6.18970445543589,1.15479086080775,1.32745138339963,2.6705869977048,0.906970670894253,2.07465587731488,2.36241514304618,2.15204603560749,2.32585463851399,2.90826983582004,2.13898427030833,2.21225730555071,2.10837217149998,1.03135543248187,2.38307724027652,4.14140516272013,2.19909762430683,2.7863814554107,2.12808280370728,2.67553226403106,2.96188237083818,0.913394847343798,10.3255551548033,15.0400770313312,1.32317038832977,4.78170133530292,1.13025098687134,1.26657142349127,1.19372344003136,1.80554989719567,6.41257840585672,6.86073617438886,14.8657666294132,2.47664241555867,3.70389054739423,31.2691638627787,35.4038049797455,26.5382680919566,0,0.139951452323658,0.276399947608848,0,2.53068794864908,5.08298667817122,2.16010681643603,3.55450103224597,3.49380101993884,3.64133735239016,3.30613822901344,3.40282724579238,11.1468877030942,6.21339313086926,1.69107881605257,23.0255480907727,9.92750942742586,5.44463327363333,5.16639293910924,5.06868376472335,4.22486059124714,6.77062801188541,13.421996086491,5.31485065817213,6.91272015018877,0.316011120628178,0.810900861160657,0.616265742988964,1.03936658382236,0.358053391334963,1.19208812868759,0.841368146639782,0.295379054349154,0.807731599585181,0.609654453239999,0.403304740547362,0,0.0962118416403295,0.584384510907845,22.6730383615211,11.3212836220773,3.3194126945506,17.7957693345923,6.76163579112667,1.87682475451182,3.11357761254351,0.214368379079066,0.501572104035363,3.95326289831947,2.30162618253588,2.29158205375759,3.09335728218638,4.11049511862385,4.5323633843382,4.05013500139084,4.95353323546643,1.81256963593682,2.5888015587591,6.43481555021895,9.17757208822371,9.73181552798565,9.72426868273176,8.17491334249131,6.98605332110054,11.7790765734856,7.82933217507798,8.98573786857083,8.33900798820532,9.63221339582911,10.5630751176203,12.5479620009642,12.5489298713544,10.2809489430548,10.0021675169445,10.8931266388164,9.64546102318525,10.3021475200827,9.71512872887022,11.6575545811041,9.76116933876356,9.29901140794552,10.7556348307923,12.4224382148236,9.05376304440939,13.3537420197124,9.99664903463803,13.0371949292027,13.4674145197857,10.202611558679,9.75194375518078,8.18462086339379,9.29621047115796,7.71626443924566,11.4912865851455,7.25187986180766,5.15690529715916,7.07766828654721,7.72069966918304,14.1439379728457
|short_description=p1@Dpf3
|short_description=p1@Dpf3
}}
}}

Latest revision as of 21:41, 26 September 2015

Short description:p1@Dpf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dpf3_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_NM_058212, uc007odc.1, uc007odd.1, uc007ode.1_5end
EntrezGene:Dpf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dpf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B910.45
Ileum epithelium, pool2.CNhs13232.10253-104C115.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C345.32
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.34
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.94
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D712.47
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F512.06
adrenal gland, neonate N00.CNhs11191.1311-23C110.00
adrenal gland, neonate N25.CNhs11223.1377-27I36.66
amnion, adult pregnant day17.5.CNhs10488.583-22A836.09
aorta, adult.CNhs10498.46-23H110.12
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F58.57
bone (os femoris), neonate N16.CNhs11225.1525-43A613.91
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B276.42
cerebellum, neonate N30.CNhs11135.1395-42I283.78
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F16.53
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.46
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G433.88
eyeball, embryo E12.CNhs11016.345-16C613.01
eyeball, embryo E14.CNhs10521.399-16E212.87
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D416.13
eyeball, neonate N00.CNhs11207.633-15C621.98
eyeball, neonate N01.CNhs11140.1532-43E728.19
eyeball, neonate N02.CNhs11205.1551-44G825.21
eyeball, neonate N16.CNhs11188.777-19A262.35
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H26.62
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I612.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E938.73
heart, embryo E12.CNhs11015.353-12F529.32
heart, embryo E13.CNhs11013.376-3I923.05
heart, embryo E14.CNhs10597.403-26D430.54
heart, embryo E15.CNhs11017.431-16C824.79
heart, embryo E16.CNhs11021.457-17C623.91
heart, embryo E17.CNhs11025.479-18E529.76
heart, embryo E18.CNhs11030.1283-20G325.22
heart, neonate N00.CNhs11213.639-21E315.88
heart, neonate N03.CNhs11221.1349-25I218.60
heart, neonate N10.CNhs11118.749-24G122.66
heart, neonate N16.CNhs11209.782-15G122.78
heart, neonate N20.CNhs11127.821-26I629.39
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D222.14
hippocampus, adult.CNhs10478.13-16E817.24
hippocampus, neonate N00.CNhs11228.627-43G118.11
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F811.42
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C78.53
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D58.92
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F37.69
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H611.99
liver, embryo E14.CNhs10594.409-16E115.52
liver, embryo E15.CNhs10520.433-16D710.35
liver, embryo E16.CNhs10523.462-17F514.47
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F413.13
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D115.92
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.62
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D418.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.67
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I719.87
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G315.04
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D131.27
spleen, neonate N20.CNhs11112.824-19H135.40
spleen, neonate N25.CNhs11099.1354-25G326.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.31
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I111.15
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F523.03
testis, embryo E15.CNhs11034.443-27C59.93
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I46.77
testis, neonate N10.CNhs11204.763-44D913.42
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B422.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.80
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B18.17
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.42e-0833
neuronal stem cell4.42e-0833
neuroblast4.42e-0833
electrically signaling cell4.42e-0833
CNS neuron (sensu Vertebrata)6.49e-0723
neuroblast (sensu Vertebrata)6.49e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.55e-0992
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