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FFCP PHASE1:Mm9::chr9:58049789..58049830,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320563
|EntrezGene=320563
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q5RKR3
|UniProt=Q5RKR3
|association_with_transcript=-183bp_to_ENSMUST00000165276,NM_001161540,uc012gug.1_5end
|association_with_transcript=-183bp_to_ENSMUST00000165276,NM_001161540,uc012gug.1_5end
|cluster_id=chr9:58049789..58049830,-
|description=CAGE_peak_1_at_Islr2_5end
|description=CAGE_peak_1_at_Islr2_5end
|id=chr9:58049789..58049830,-
|id=chr9:58049789..58049830,-
|ontology_enrichment_celltype=CL:0000117!5.84e-11!23;CL:0000337!5.84e-11!23
|ontology_enrichment_celltype=CL:0000117!5.84e-11!23;CL:0000337!5.84e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.85e-14,23;CL:0000337,1.85e-14,23;CL:0000540,6.89e-08,33;CL:0000047,6.89e-08,33;CL:0000031,6.89e-08,33;CL:0000404,6.89e-08,33;CL:0002609,1.07e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!1.40e-20!49;UBERON:0000033!1.68e-20!63;UBERON:0002346!2.32e-19!71;UBERON:0003075!2.32e-19!71;UBERON:0007284!2.32e-19!71;UBERON:0001049!2.65e-17!52;UBERON:0005068!2.65e-17!52;UBERON:0006241!2.65e-17!52;UBERON:0007135!2.65e-17!52;UBERON:0003080!4.97e-17!40;UBERON:0002780!6.86e-17!39;UBERON:0001890!6.86e-17!39;UBERON:0006240!6.86e-17!39;UBERON:0000955!7.29e-17!50;UBERON:0006238!7.29e-17!50;UBERON:0002616!1.31e-16!49;UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0001017!1.85e-15!73;UBERON:0005743!1.85e-15!73;UBERON:0002020!4.53e-15!34;UBERON:0000073!2.17e-14!75;UBERON:0001016!2.17e-14!75;UBERON:0002791!9.37e-14!29;UBERON:0003528!9.37e-14!29;UBERON:0001893!9.37e-14!29;UBERON:0000153!2.41e-11!94;UBERON:0000956!4.84e-11!21;UBERON:0001869!4.84e-11!21;UBERON:0000203!4.84e-11!21;UBERON:0007811!6.76e-11!86;UBERON:0002619!2.73e-08!17
|ontology_enrichment_uberon=UBERON:0003056!1.40e-20!49;UBERON:0000033!1.68e-20!63;UBERON:0002346!2.32e-19!71;UBERON:0003075!2.32e-19!71;UBERON:0007284!2.32e-19!71;UBERON:0001049!2.65e-17!52;UBERON:0005068!2.65e-17!52;UBERON:0006241!2.65e-17!52;UBERON:0007135!2.65e-17!52;UBERON:0003080!4.97e-17!40;UBERON:0002780!6.86e-17!39;UBERON:0001890!6.86e-17!39;UBERON:0006240!6.86e-17!39;UBERON:0000955!7.29e-17!50;UBERON:0006238!7.29e-17!50;UBERON:0002616!1.31e-16!49;UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0001017!1.85e-15!73;UBERON:0005743!1.85e-15!73;UBERON:0002020!4.53e-15!34;UBERON:0000073!2.17e-14!75;UBERON:0001016!2.17e-14!75;UBERON:0002791!9.37e-14!29;UBERON:0003528!9.37e-14!29;UBERON:0001893!9.37e-14!29;UBERON:0000153!2.41e-11!94;UBERON:0000956!4.84e-11!21;UBERON:0001869!4.84e-11!21;UBERON:0000203!4.84e-11!21;UBERON:0007811!6.76e-11!86;UBERON:0002619!2.73e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.29e-26,49;UBERON:0003080,1.60e-23,40;UBERON:0002780,2.43e-23,39;UBERON:0001890,2.43e-23,39;UBERON:0006240,2.43e-23,39;UBERON:0000073,1.31e-22,54;UBERON:0002346,2.16e-22,64;UBERON:0003075,2.16e-22,64;UBERON:0007284,2.16e-22,64;UBERON:0001049,5.89e-21,52;UBERON:0005068,5.89e-21,52;UBERON:0006241,5.89e-21,52;UBERON:0007135,5.89e-21,52;UBERON:0002020,1.38e-20,34;UBERON:0000955,5.41e-20,47;UBERON:0006238,5.41e-20,47;UBERON:0002616,1.17e-19,46;UBERON:0003528,7.64e-19,29;UBERON:0002791,7.64e-19,29;UBERON:0001893,7.64e-19,29;UBERON:0001017,7.29e-18,73;UBERON:0010371,1.54e-17,73;UBERON:0001016,6.07e-17,75;UBERON:0004121,7.90e-16,95;UBERON:0000924,7.90e-16,95;UBERON:0006601,7.90e-16,95;UBERON:0000956,6.60e-15,21;UBERON:0001869,6.60e-15,21;UBERON:0000203,6.60e-15,21;UBERON:0010314,3.15e-11,92;UBERON:0002619,3.48e-11,17;UBERON:0002021,2.02e-08,10;UBERON:0000411,2.02e-08,10;UBERON:0001950,2.02e-08,10
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0,0.139986421625363,0,0,0,0,0,0,0,34.3937983461316,35.4423956112262,25.3532561402472,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,40.5426384126148,58.052553482627,49.2160409562234,1.14260393761521,2.20868540951614,75.3318415171967,76.6763768145891,72.6182841421917,1.10115880999389,1.91531007127782,1.99688493233117,33.2353445080089,25.8910031394819,32.2966289745191,0,2.25105044012672,1.22238598221448,4.41942878210502,3.41692033917847,4.28718725398191,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,1.76383060703557,0,0,0.433798070759735,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.04853447583376,5.49000723382352,91.0994052818267,6.77914848749878,6.13717097592793,1.66230435647648,4.38051410282946,0.305518091550949,0,0,0.210441855886474,3.6433724029557,3.67843367093557,6.48223667299257,6.63101198477146,7.89223390155403,6.53379973452734,6.27801554550183,0.517406741478031,0.862271971731369,2.45837904218165,2.99116911078713,2.41115305670332,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,10.0939175310781,104.653990789732,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.494096864172033,0,0,0,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0.345369963731791,0,1.50791283939272,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0.390438744296638,0.430846795465598,0,0,0,0,0,0,1.92792789853084,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,9.00305470156551,14.229455216103,7.71613326113732,6.7389288784064,5.35106452806212,3.9491764944509,2.13125464380219,1.40803024838226,0.42366414172764,0,0.98931751764888,0.161464426695906,0.482503399425247,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,4.03694674318743,4.13646226142744,8.94475466382619,7.8787492321416,8.61676240002969,22.0631608654017,12.2392121753313,1.36317147753424,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.906921534460845,0,0,0,0,4.129014459926,0,0.214368379079066,0,11.8597886949584,10.5874804396651,12.6037012956667,5.84300819968538,5.48066015816514,7.55393897389701,7.42524750254986,5.85417564191487,7.70342095273148,3.62432218226274,0.93408612825759,3.19219898720825,6.31714341290296,4.61902762429759,3.14419743941973,4.96377472815038,6.22290837844523,10.0957178047058,5.77654577265267,5.55933865880354,6.08350319736575,5.65879024158229,5.52484894072306,4.67383612555546,4.99688579913835,4.28664322154766,4.28772005995965,5.98018583437486,5.76920261124629,5.88795680537589,8.9146005620208,6.38912902173615,5.00715998889374,4.79643174886684,5.92889096616583,6.00763716030903,4.57319932181931,5.78753365163254,6.11118512306378,6.17256498823512,5.33857581558784,4.82671963640261,4.50154147486658,4.95797891795091,4.82266527452853,20.2346568129736,4.21076895201735,4.29742108096597,1.3390183244819,0.661774257358546,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,1.30815093828268,0,0,0.139986421625363,0,0,0,0,0,0,0,34.3937983461316,35.4423956112262,25.3532561402472,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,40.5426384126148,58.052553482627,49.2160409562234,1.14260393761521,2.20868540951614,75.3318415171967,76.6763768145891,72.6182841421917,1.10115880999389,1.91531007127782,1.99688493233117,33.2353445080089,25.8910031394819,32.2966289745191,0,2.25105044012672,1.22238598221448,4.41942878210502,3.41692033917847,4.28718725398191,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.452167921657868,1.76383060703557,0,0,0.433798070759735,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,1.04853447583376,5.49000723382352,91.0994052818267,6.77914848749878,6.13717097592793,1.66230435647648,4.38051410282946,0.305518091550949,0,0,0.210441855886474,3.6433724029557,3.67843367093557,6.48223667299257,6.63101198477146,7.89223390155403,6.53379973452734,6.27801554550183,0.517406741478031,0.862271971731369,2.45837904218165,2.99116911078713,2.41115305670332,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0,0,0,0,0,0,0.324275238183423,0.146199987425332,0.219550115291051,0.134206418760372,10.0939175310781,104.653990789732,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.494096864172033,0,0,0,0,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0.345369963731791,0,1.50791283939272,0,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0.390438744296638,0.430846795465598,0,0,0,0,0,0,1.92792789853084,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,9.00305470156551,14.229455216103,7.71613326113732,6.7389288784064,5.35106452806212,3.9491764944509,2.13125464380219,1.40803024838226,0.42366414172764,0,0.98931751764888,0.161464426695906,0.482503399425247,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0,0,0.259229946583586,0.621339313086926,0,4.03694674318743,4.13646226142744,8.94475466382619,7.8787492321416,8.61676240002969,22.0631608654017,12.2392121753313,1.36317147753424,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0.906921534460845,0,0,0,0,4.129014459926,0,0.214368379079066,0,11.8597886949584,10.5874804396651,12.6037012956667,5.84300819968538,5.48066015816514,7.55393897389701,7.42524750254986,5.85417564191487,7.70342095273148,3.62432218226274,0.93408612825759,3.19219898720825,6.31714341290296,4.61902762429759,3.14419743941973,4.96377472815038,6.22290837844523,10.0957178047058,5.77654577265267,5.55933865880354,6.08350319736575,5.65879024158229,5.52484894072306,4.67383612555546,4.99688579913835,4.28664322154766,4.28772005995965,5.98018583437486,5.76920261124629,5.88795680537589,8.9146005620208,6.38912902173615,5.00715998889374,4.79643174886684,5.92889096616583,6.00763716030903,4.57319932181931,5.78753365163254,6.11118512306378,6.17256498823512,5.33857581558784,4.82671963640261,4.50154147486658,4.95797891795091,4.82266527452853,20.2346568129736,4.21076895201735,4.29742108096597,1.3390183244819,0.661774257358546,0.695603506861264
|short_description=p1@Islr2
|short_description=p1@Islr2
}}
}}

Latest revision as of 22:05, 26 September 2015

Short description:p1@Islr2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Islr2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -183bp_to_ENSMUST00000165276, NM_001161540, uc012gug.1_5end
EntrezGene:Islr2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Islr2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C334.39
Mouse Granule cells, donor2.CNhs12357.11731-123E335.44
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D540.54
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F558.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D949.22
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D275.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F276.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D672.62
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D433.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F191.10
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C67.89
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G1104.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C714.23
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I57.88
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B722.06
testis, neonate N07.CNhs11222.726-26I412.24
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.85e-1423
neuroblast (sensu Vertebrata)1.85e-1423
neuron6.89e-0833
neuronal stem cell6.89e-0833
neuroblast6.89e-0833
electrically signaling cell6.89e-0833
neuron of cerebral cortex1.07e-076

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.29e-2649
anterior neural tube1.60e-2340
regional part of forebrain2.43e-2339
forebrain2.43e-2339
future forebrain2.43e-2339
regional part of nervous system1.31e-2254
neurectoderm2.16e-2264
neural plate2.16e-2264
presumptive neural plate2.16e-2264
neural tube5.89e-2152
neural rod5.89e-2152
future spinal cord5.89e-2152
neural keel5.89e-2152
gray matter1.38e-2034
brain5.41e-2047
future brain5.41e-2047
regional part of brain1.17e-1946
brain grey matter7.64e-1929
regional part of telencephalon7.64e-1929
telencephalon7.64e-1929
central nervous system7.29e-1873
ecto-epithelium1.54e-1773
nervous system6.07e-1775
ectoderm-derived structure7.90e-1695
ectoderm7.90e-1695
presumptive ectoderm7.90e-1695
cerebral cortex6.60e-1521
cerebral hemisphere6.60e-1521
pallium6.60e-1521
structure with developmental contribution from neural crest3.15e-1192
regional part of cerebral cortex3.48e-1117
occipital lobe2.02e-0810
visual cortex2.02e-0810
neocortex2.02e-0810
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