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FFCP PHASE1:Mm9::chr9:65308733..65308790,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27965
|EntrezGene=27965
|HGNC=
|HGNC=
|MCL_coexpression_id=2854
|TSSclassifier=NA
|UniProt=Q9CQC8,A2RT57
|UniProt=Q9CQC8,A2RT57
|association_with_transcript=0bp_to_ENSMUST00000034955,NM_138584,uc009qdi.1_5end
|association_with_transcript=0bp_to_ENSMUST00000034955,NM_138584,uc009qdi.1_5end
|cluster_id=chr9:65308733..65308790,+
|description=CAGE_peak_1_at_Spg21_5end
|description=CAGE_peak_1_at_Spg21_5end
|id=chr9:65308733..65308790,+
|id=chr9:65308733..65308790,+
|ontology_enrichment_celltype=CL:0000144!5.95e-15!121;CL:0000012!5.95e-15!121;CL:0002371!1.41e-13!118;CL:0000548!5.19e-12!115;CL:0000004!5.19e-12!115;CL:0000255!5.19e-12!115;CL:0000034!5.49e-12!97;CL:0000723!6.54e-12!91;CL:0000048!6.54e-12!91;CL:0000055!1.33e-09!50;CL:0000219!6.13e-09!54;CL:0000221!3.82e-08!44;CL:0000133!3.82e-08!44;CL:0002319!9.40e-08!43;CL:0002321!5.86e-07!70;CL:0000220!5.86e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000034,5.49e-12,97;CL:0000723,6.54e-12,91;CL:0000048,6.54e-12,91;CL:0000219,6.13e-09,54;CL:0000221,3.82e-08,44;CL:0000133,3.82e-08,44;CL:0002319,9.40e-08,43;CL:0002321,5.86e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=38.9161698464649,18.8446720125255,27.2999543633722,21.1724947914781,22.5403078475856,19.6418748136911,18.9226238882376,35.3797906229919,48.8536865866284,43.3019373695688,38.3528248825131,39.1681300667102,25.6801094896809,32.520389699867,13.9906099962578,12.3509913107794,8.39474253753776,33.2812584452941,36.6095537727323,33.9511721438424,21.3458658279185,24.6241558978196,23.2467812333652,28.4786512572264,36.0172571275457,33.3054539186712,27.9995297503399,24.7791917588772,31.7339110492144,26.7151937545527,24.1686256614282,13.3356441426523,11.6862309641068,15.8481681015439,25.1300909183609,24.1040235769814,19.3960888449251,103.795844422753,98.4482534099989,82.1932278038863,105.881667845583,96.3094133791408,109.725339785041,44.5674735633544,42.1728033873181,56.3488529136362,52.4202200713186,46.4393583090351,44.1569227296288,44.5244468880109,42.4158857524848,41.6882436658418,43.9590427871269,29.7398478224651,32.601098516819,40.6469908936796,43.2665494307523,30.4246534443691,46.3304695368479,50.7831340101152,46.9035238594573,75.2234861193473,70.25428889278,130.485459005803,122.619428958305,137.833142299543,72.5032267454539,77.9963159802756,39.6094319018385,40.2317696228438,41.0133674635195,33.7068161596488,29.5963844875162,32.9500249888226,44.5681440234799,46.8801581171111,16.5173821499083,19.4084753889485,19.9688493233117,41.0166354840903,41.4439025518916,29.6920621217353,22.3346399201105,21.3849791812038,25.9757021220577,27.1058298635774,20.9286370774681,30.5695091153493,47.707501799906,45.8719369848188,24.0587525622393,22.371020801516,25.8389106808945,29.6836755400799,15.5946340187441,19.2651561451854,24.7182179431883,61.1844858055227,49.3593408745451,62.1877651138199,43.2389298714409,29.5150898052931,22.9324715735981,14.2213340630666,40.2673336280858,35.2170213010387,39.4309067111531,21.3523855074642,23.5633474118926,31.1728492036132,24.287945747259,24.3572382649713,24.4452427091422,23.0605640045513,18.2262496060342,26.3899841792318,19.7755974187499,32.5348553069801,37.1536431818947,18.1178871941098,10.3795513676385,15.5160081003271,22.3670113461747,9.9545470983926,12.9856958224342,21.9693067479389,32.8293441146222,43.7928993625188,39.5188406197231,16.6267609739353,22.4175295381127,30.7853162676518,16.6871347384585,16.1100738118108,18.2853479212413,16.710850095979,28.3113431503879,25.7522429162893,39.4247503156533,58.9237196482127,36.1734831436316,49.6588545576301,38.3532336485394,29.3874394779644,28.9835486384657,26.5195400989639,33.4515156678232,34.1488449375501,26.7304311236724,24.7728965019843,30.967397852855,32.8793598641362,25.0242524303038,29.9496863209063,20.7839957772023,21.2966665495788,40.0261516768544,39.1168818814367,56.5485363797229,15.3273071676271,20.4037672183554,19.0865785148676,18.4660893756464,20.46348010173,16.6608481918369,14.6496385192757,14.4867636755794,17.1645053279739,13.3293478429919,14.2825693748813,11.5928397650574,13.3041988557052,12.2948064562988,11.1391327571109,16.4026159880019,25.314534645304,37.667741260153,13.4869788998408,21.3288250535234,20.669063795579,22.1652033474001,23.7986559055544,25.5734750421601,38.0451252225118,19.455691523325,38.2101574959705,27.6468729680296,32.4299049427076,25.930223586843,17.9763881730844,23.9913235360911,24.6935178835415,32.62287896393,23.3066965723847,32.6852433451933,23.4199027022111,22.4984885114446,25.8099817196372,28.7093878544128,28.4887585600632,33.2837303023715,42.3252272251776,21.6410417773619,10.8449318715461,13.3660116676978,11.2431056192427,12.7801876474757,13.7470981058878,14.0044218479781,17.2617682470486,26.2659067375557,18.6701760967895,18.6898668485561,23.0727387554472,28.7074659265396,20.7114679916632,14.8899853223187,28.946611281802,33.2555742299888,29.7501516479661,17.7631824321808,19.5206848641466,18.5405296147917,26.4659886758069,24.0424077294874,30.050581770101,22.0689201748667,23.6967217924189,22.3236676120482,27.3651735575282,33.5008864819837,33.5585815909107,91.9826832029561,82.1297582566252,21.6376280128376,26.2139908989496,13.0045977890111,13.0104972117346,28.8525503862949,21.7124997395761,28.3957397474631,26.1593958678748,18.7418356027535,35.3673820969777,31.4146130456176,25.4768877709949,33.5992882390162,30.1023533648651,26.4842811224171,15.7447445046685,33.7817402795679,35.7911863371183,32.9031657894224,24.9104885688529,18.5843193675948,25.0064055239631,24.4882081141448,12.6365403436452,17.4228116799656,11.9899707698132,18.3484088149437,16.7225515559653,16.0423820273125,17.0659849285341,18.9753495434998,19.5957532171555,30.6395645178409,26.2889197285713,29.3644212186853,30.8645330445493,23.2315706071378,23.1879462882692,25.9987452551351,29.2286351150015,24.8752010547533,22.8778636532926,16.9806866502321,20.940554123568,31.1626343523098,24.1854828961905,32.5886499128563,23.3080077637987,20.4036585640896,16.1320012749143,15.2075083910089,20.2259130603958,14.0747840800981,11.6788443342908,12.0290920394502,16.4720284708696,40.7948231985253,46.0440278144835,49.6137905957881,20.0480829783174,20.5618395827738,23.1784192524607,20.3050040744986,16.3088870891286,19.4342681734098,18.8810084938749,18.8449879053766,22.5110110106265,24.8860748720242,36.0376801590417,20.2929457926309,23.1750646368167,23.9914811162792,25.6675568614143,24.5403664607689,22.9780330667458,24.2929483996711,25.5200594294142,23.6982118402107,14.7366313703864,19.298010419277,25.2808896502543,35.0714622451984,28.0400913059978,24.9447980117366,23.810550523775,22.6496744450642,22.957330858314,23.7780138751069,17.5681622909777,22.09997392995,20.3668893976418,17.8347921753747,21.4552406857935,23.8428880450401,22.4463079779059,19.7567498502918,13.1879369215929,23.1680770582428,30.3307662630539,35.4719878602734,29.3042598827624,44.5886228484457,28.5896099300157,7.90652579663893,11.5081309126794,12.6037012956667,13.9201077698387,12.3314853558716,11.3309084608455,15.5255175053315,15.7612421128477,14.0474146785103,12.9440077937955,25.0127507677866,28.7297908848742,28.5125121609404,26.7417388775123,36.4726902972689,27.2088392506021,28.6698278864084,25.1362769831451,22.7852638810189,23.753537905797,27.3757643881459,25.0873034043481,28.9352258081937,27.914966448523,26.0757029058484,22.3858034903045,24.7992457521991,22.7632880147172,30.906442560248,26.9374023845947,30.1724942099166,22.5394273822359,20.2670761455223,26.0170085771868,24.9389858100626,26.9920599174448,25.6099162021882,24.7285528751572,27.0250186553265,23.567975409625,25.86243395107,24.5276161115153,37.2400249284417,28.6633156194037,25.2707660385295,39.7198818921334,26.2003401458857,30.941431782955,29.4584031386019,34.6328528017639,29.6790829594139
|phase1_expression=38.9161698464649,18.8446720125255,27.2999543633722,21.1724947914781,22.5403078475856,19.6418748136911,18.9226238882376,35.3797906229919,48.8536865866284,43.3019373695688,38.3528248825131,39.1681300667102,25.6801094896809,32.520389699867,13.9906099962578,12.3509913107794,8.39474253753776,33.2812584452941,36.6095537727323,33.9511721438424,21.3458658279185,24.6241558978196,23.2467812333652,28.4786512572264,36.0172571275457,33.3054539186712,27.9995297503399,24.7791917588772,31.7339110492144,26.7151937545527,24.1686256614282,13.3356441426523,11.6862309641068,15.8481681015439,25.1300909183609,24.1040235769814,19.3960888449251,103.795844422753,98.4482534099989,82.1932278038863,105.881667845583,96.3094133791408,109.725339785041,44.5674735633544,42.1728033873181,56.3488529136362,52.4202200713186,46.4393583090351,44.1569227296288,44.5244468880109,42.4158857524848,41.6882436658418,43.9590427871269,29.7398478224651,32.601098516819,40.6469908936796,43.2665494307523,30.4246534443691,46.3304695368479,50.7831340101152,46.9035238594573,75.2234861193473,70.25428889278,130.485459005803,122.619428958305,137.833142299543,72.5032267454539,77.9963159802756,39.6094319018385,40.2317696228438,41.0133674635195,33.7068161596488,29.5963844875162,32.9500249888226,44.5681440234799,46.8801581171111,16.5173821499083,19.4084753889485,19.9688493233117,41.0166354840903,41.4439025518916,29.6920621217353,22.3346399201105,21.3849791812038,25.9757021220577,27.1058298635774,20.9286370774681,30.5695091153493,47.707501799906,45.8719369848188,24.0587525622393,22.371020801516,25.8389106808945,29.6836755400799,15.5946340187441,19.2651561451854,24.7182179431883,61.1844858055227,49.3593408745451,62.1877651138199,43.2389298714409,29.5150898052931,22.9324715735981,14.2213340630666,40.2673336280858,35.2170213010387,39.4309067111531,21.3523855074642,23.5633474118926,31.1728492036132,24.287945747259,24.3572382649713,24.4452427091422,23.0605640045513,18.2262496060342,26.3899841792318,19.7755974187499,32.5348553069801,37.1536431818947,18.1178871941098,10.3795513676385,15.5160081003271,22.3670113461747,9.9545470983926,12.9856958224342,21.9693067479389,32.8293441146222,43.7928993625188,39.5188406197231,16.6267609739353,22.4175295381127,30.7853162676518,16.6871347384585,16.1100738118108,18.2853479212413,16.710850095979,28.3113431503879,25.7522429162893,39.4247503156533,58.9237196482127,36.1734831436316,49.6588545576301,38.3532336485394,29.3874394779644,28.9835486384657,26.5195400989639,33.4515156678232,34.1488449375501,26.7304311236724,24.7728965019843,30.967397852855,32.8793598641362,25.0242524303038,29.9496863209063,20.7839957772023,21.2966665495788,40.0261516768544,39.1168818814367,56.5485363797229,15.3273071676271,20.4037672183554,19.0865785148676,18.4660893756464,20.46348010173,16.6608481918369,14.6496385192757,14.4867636755794,17.1645053279739,13.3293478429919,14.2825693748813,11.5928397650574,13.3041988557052,12.2948064562988,11.1391327571109,16.4026159880019,25.314534645304,37.667741260153,13.4869788998408,21.3288250535234,20.669063795579,22.1652033474001,23.7986559055544,25.5734750421601,38.0451252225118,19.455691523325,38.2101574959705,27.6468729680296,32.4299049427076,25.930223586843,17.9763881730844,23.9913235360911,24.6935178835415,32.62287896393,23.3066965723847,32.6852433451933,23.4199027022111,22.4984885114446,25.8099817196372,28.7093878544128,28.4887585600632,33.2837303023715,42.3252272251776,21.6410417773619,10.8449318715461,13.3660116676978,11.2431056192427,12.7801876474757,13.7470981058878,14.0044218479781,17.2617682470486,26.2659067375557,18.6701760967895,18.6898668485561,23.0727387554472,28.7074659265396,20.7114679916632,14.8899853223187,28.946611281802,33.2555742299888,29.7501516479661,17.7631824321808,19.5206848641466,18.5405296147917,26.4659886758069,24.0424077294874,30.050581770101,22.0689201748667,23.6967217924189,22.3236676120482,27.3651735575282,33.5008864819837,33.5585815909107,91.9826832029561,82.1297582566252,21.6376280128376,26.2139908989496,13.0045977890111,13.0104972117346,28.8525503862949,21.7124997395761,28.3957397474631,26.1593958678748,18.7418356027535,35.3673820969777,31.4146130456176,25.4768877709949,33.5992882390162,30.1023533648651,26.4842811224171,15.7447445046685,33.7817402795679,35.7911863371183,32.9031657894224,24.9104885688529,18.5843193675948,25.0064055239631,24.4882081141448,12.6365403436452,17.4228116799656,11.9899707698132,18.3484088149437,16.7225515559653,16.0423820273125,17.0659849285341,18.9753495434998,19.5957532171555,30.6395645178409,26.2889197285713,29.3644212186853,30.8645330445493,23.2315706071378,23.1879462882692,25.9987452551351,29.2286351150015,24.8752010547533,22.8778636532926,16.9806866502321,20.940554123568,31.1626343523098,24.1854828961905,32.5886499128563,23.3080077637987,20.4036585640896,16.1320012749143,15.2075083910089,20.2259130603958,14.0747840800981,11.6788443342908,12.0290920394502,16.4720284708696,40.7948231985253,46.0440278144835,49.6137905957881,20.0480829783174,20.5618395827738,23.1784192524607,20.3050040744986,16.3088870891286,19.4342681734098,18.8810084938749,18.8449879053766,22.5110110106265,24.8860748720242,36.0376801590417,20.2929457926309,23.1750646368167,23.9914811162792,25.6675568614143,24.5403664607689,22.9780330667458,24.2929483996711,25.5200594294142,23.6982118402107,14.7366313703864,19.298010419277,25.2808896502543,35.0714622451984,28.0400913059978,24.9447980117366,23.810550523775,22.6496744450642,22.957330858314,23.7780138751069,17.5681622909777,22.09997392995,20.3668893976418,17.8347921753747,21.4552406857935,23.8428880450401,22.4463079779059,19.7567498502918,13.1879369215929,23.1680770582428,30.3307662630539,35.4719878602734,29.3042598827624,44.5886228484457,28.5896099300157,7.90652579663893,11.5081309126794,12.6037012956667,13.9201077698387,12.3314853558716,11.3309084608455,15.5255175053315,15.7612421128477,14.0474146785103,12.9440077937955,25.0127507677866,28.7297908848742,28.5125121609404,26.7417388775123,36.4726902972689,27.2088392506021,28.6698278864084,25.1362769831451,22.7852638810189,23.753537905797,27.3757643881459,25.0873034043481,28.9352258081937,27.914966448523,26.0757029058484,22.3858034903045,24.7992457521991,22.7632880147172,30.906442560248,26.9374023845947,30.1724942099166,22.5394273822359,20.2670761455223,26.0170085771868,24.9389858100626,26.9920599174448,25.6099162021882,24.7285528751572,27.0250186553265,23.567975409625,25.86243395107,24.5276161115153,37.2400249284417,28.6633156194037,25.2707660385295,39.7198818921334,26.2003401458857,30.941431782955,29.4584031386019,34.6328528017639,29.6790829594139
|short_description=p1@Spg21
|short_description=p1@Spg21
}}
}}

Latest revision as of 00:23, 27 September 2015

Short description:p1@Spg21
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Spg21_5end
Coexpression cluster:MCL_coexpression_mm9:2854
Association with transcript: 0bp_to_ENSMUST00000034955, NM_138584, uc009qdi.1_5end
EntrezGene:Spg21
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Spg21

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I422.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.64
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E935.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E748.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E638.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F139.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E832.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.28
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.02
GP2+ M cell, pool1.CNhs13228.11845-124H933.31
GP2+ M cell, pool2.CNhs13231.11846-124I128.00
GP2+ M cell, pool3.CNhs13240.11847-124I224.78
Ileum epithelium, pool1.CNhs13199.10252-104B931.73
Ileum epithelium, pool2.CNhs13232.10253-104C126.72
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F525.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8103.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H198.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H382.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9105.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H296.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4109.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D844.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D942.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B356.35
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B752.42
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C246.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B844.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.52
Mouse Astrocytes, donor2.CNhs12078.11552-120C442.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A243.96
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.74
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.60
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C140.65
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E143.27
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C346.33
Mouse Granule cells, donor2.CNhs12357.11731-123E350.78
Mouse Granule cells, donor3.CNhs12108.11636-122C746.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C675.22
Mouse Meningeal cells, donor3.CNhs12109.11639-122D170.25
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7130.49
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7122.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2137.83
Mouse Microglia, donor1.CNhs12629.11718-123C872.50
Mouse Microglia, donor2.CNhs12634.11736-123E878.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D539.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F540.23
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D941.01
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F441.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I625.98
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E130.57
Mouse Schwann, donor1.CNhs12507.11728-123D947.71
Mouse Schwann, donor2.CNhs12573.11746-123F945.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I761.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E349.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I862.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G235.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B621.35
accessory axillary lymph node, adult.CNhs10475.1063-29H923.56
adrenal gland, adult.CNhs10508.49-24D731.17
adrenal gland, embryo E14.CNhs11038.406-44C524.29
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I124.45
adrenal gland, embryo E18.CNhs11026.1262-18F523.06
adrenal gland, neonate N00.CNhs11191.1311-23C118.23
adrenal gland, neonate N25.CNhs11223.1377-27I326.39
amnion, adult pregnant day17.5.CNhs10488.583-22A819.78
aorta, adult.CNhs10498.46-23H132.53
bone (os femoris), adult.CNhs10483.56-12G237.15
bone (os femoris), neonate N02.CNhs11227.1985-43F518.12
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H721.97
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C732.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D143.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D439.52
corpora quadrigemina, adult.CNhs10501.16-22A416.63
corpus striatum, adult.CNhs10487.19-21D822.42
corpus striatum, neonate N00.CNhs11226.630-43F130.79
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F218.29
diencephalon, neonate N30.CNhs11201.1388-42B216.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B128.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.75
epididymis, adult.CNhs10490.58-23B239.42
eyeball, adult.CNhs10484.31-12G458.92
eyeball, embryo E12.CNhs11016.345-16C636.17
eyeball, embryo E14.CNhs10521.399-16E249.66
eyeball, embryo E15.CNhs10593.426-16C938.35
eyeball, embryo E17.CNhs11023.1261-18D429.39
eyeball, neonate N00.CNhs11207.633-15C628.98
eyeball, neonate N01.CNhs11140.1532-43E726.52
eyeball, neonate N02.CNhs11205.1551-44G833.45
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E226.73
forelimb, embryo E12.CNhs10600.359-14H224.77
forelimb, embryo E13.CNhs10589.384-1E230.97
forelimb, embryo E14.CNhs10577.413-26A832.88
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C429.95
forelimb, embryo E18.CNhs11008.1520-43B520.78
gonad, embryo E13.CNhs11044.1564-45I621.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D239.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D556.55
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F520.40
heart, embryo E13.CNhs11013.376-3I919.09
heart, embryo E14.CNhs10597.403-26D418.47
heart, embryo E15.CNhs11017.431-16C820.46
heart, embryo E16.CNhs11021.457-17C616.66
heart, embryo E17.CNhs11025.479-18E514.65
heart, embryo E18.CNhs11030.1283-20G314.49
heart, neonate N00.CNhs11213.639-21E317.16
heart, neonate N03.CNhs11221.1349-25I213.33
heart, neonate N10.CNhs11118.749-24G114.28
heart, neonate N16.CNhs11209.782-15G111.59
heart, neonate N20.CNhs11127.821-26I613.30
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D211.14
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G125.31
intestinal mucosa, adult.CNhs10506.860-29I337.67
intestine, adult.CNhs10496.178-9A313.49
intestine, embryo E12.CNhs11019.1251-16I521.33
intestine, embryo E13.CNhs11010.381-16D520.67
intestine, embryo E15.CNhs10602.976-16D822.17
intestine, embryo E16.CNhs10585.463-22H423.80
intestine, embryo E17.CNhs10582.482-18D325.57
intestine, embryo E18.CNhs10526.1289-20F738.05
intestine, neonate N00.CNhs11126.644-26D119.46
intestine, neonate N01.CNhs11192.1322-23E938.21
intestine, neonate N06.CNhs11102.688-20B827.65
intestine, neonate N07.CNhs11095.720-20F232.43
intestine, neonate N10.CNhs11098.755-23A525.93
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E323.99
intestine, neonate N30.CNhs11131.1384-42G124.69
kidney, embryo E14.CNhs10606.411-4I932.62
kidney, embryo E15.CNhs10997.434-16F823.31
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I223.42
kidney, embryo E18.CNhs11001.1288-20C722.50
kidney, neonate N00.CNhs11214.646-21G725.81
kidney, neonate N10.CNhs11206.758-6D528.71
kidney, neonate N20.CNhs11113.832-19I128.49
kidney, neonate N25.CNhs11122.1353-25F333.28
kidney, neonate N30.CNhs11203.1385-42H142.33
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E111.24
liver, embryo E15.CNhs10520.433-16D712.78
liver, embryo E16.CNhs10523.462-17F513.75
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G417.26
liver, neonate N00.CNhs11117.641-24F426.27
liver, neonate N03.CNhs11123.1345-25G218.67
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H223.07
liver, neonate N10.CNhs11115.751-24B928.71
liver, neonate N20.CNhs11220.823-25A320.71
liver, neonate N25.CNhs11198.1368-26H114.89
liver, neonate N30.CNhs11106.1382-42D128.95
lung, adult.CNhs10474.28-22B133.26
lung, embryo E12.CNhs10522.354-16G229.75
lung, embryo E14.CNhs10604.404-26F817.76
lung, embryo E15.CNhs11020.432-17C519.52
lung, embryo E16.CNhs10998.458-17B618.54
lung, embryo E17.CNhs10605.480-44A626.47
lung, embryo E18.CNhs10583.1287-20I624.04
lung, neonate N00.CNhs11224.640-42C630.05
lung, neonate N06.CNhs11212.683-20E522.07
lung, neonate N07.CNhs11111.715-19A323.70
lung, neonate N10.CNhs11219.750-23E622.32
lung, neonate N20.CNhs11109.822-18A427.37
lung, neonate N25.CNhs11119.1359-25C733.50
lung, neonate N30.CNhs11133.1394-42H233.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A191.98
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A182.13
mammary gland, adult lactating day02.CNhs10480.595-22B621.64
mammary gland, adult pregnant day19.CNhs10476.588-5H226.21
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.71
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.40
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E226.16
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D735.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D831.41
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D433.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D530.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.48
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I733.78
ovary, embryo E18.CNhs11040.505-44H735.79
ovary, neonate N00.CNhs11217.1299-22I432.90
oviduct, adult pregnant day01.CNhs10500.988-6G624.91
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F425.01
pancreas, embryo E15.CNhs11042.1556-45F224.49
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B617.07
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G830.64
pituitary gland, embryo E12.CNhs11018.346-16E626.29
pituitary gland, embryo E13.CNhs11009.370-44C729.36
pituitary gland, embryo E14.CNhs11037.398-44A530.86
pituitary gland, embryo E15.CNhs10592.427-16B923.23
pituitary gland, embryo E16.CNhs11036.449-43F623.19
pituitary gland, embryo E17.CNhs11039.1265-44F526.00
pituitary gland, neonate N00.CNhs11190.1308-22E929.23
placenta, adult pregnant day10.CNhs10472.539-13I724.88
placenta, adult pregnant day17.CNhs10464.577-18G322.88
prostate, adult.CNhs10470.859-1F816.98
skin, adult.CNhs10492.30-1C320.94
skin, neonate N00.CNhs11124.650-25G431.16
skin, neonate N03.CNhs11215.662-22H324.19
skin, neonate N06.CNhs11097.693-20I532.59
skin, neonate N10.CNhs11108.762-6C423.31
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C916.13
spleen, adult.CNhs10465.25-2G215.21
spleen, embryo E16.CNhs11035.461-43C120.23
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H112.03
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C640.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C946.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D349.61
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E320.56
stomach, embryo E15.CNhs10603.1252-16G823.18
stomach, embryo E16.CNhs11022.459-17D420.31
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C619.43
stomach, neonate N03.CNhs11193.1340-24B818.88
stomach, neonate N07.CNhs11210.718-18A918.84
stomach, neonate N25.CNhs11104.1355-25E422.51
stomach, neonate N30.CNhs11134.1386-42I124.89
submandibular gland, adult.CNhs10469.59-29C136.04
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F523.18
testis, embryo E15.CNhs11034.443-27C523.99
testis, embryo E16.CNhs11033.470-26G525.67
testis, embryo E17.CNhs11029.486-18I524.54
testis, embryo E18.CNhs11027.503-18G522.98
testis, neonate N00.CNhs11189.1300-22B724.29
testis, neonate N07.CNhs11222.726-26I425.52
testis, neonate N10.CNhs11204.763-44D923.70
testis, neonate N20.CNhs11110.839-18H314.74
testis, neonate N30.CNhs11130.1391-42E219.30
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I435.07
thymus, embryo E15.CNhs11005.430-45I228.04
thymus, embryo E16.CNhs11002.456-26C524.94
thymus, embryo E17.CNhs10581.478-18C123.81
thymus, embryo E18.CNhs10595.1273-19G422.65
thymus, neonate N02.CNhs11181.1541-43F822.96
thymus, neonate N03.CNhs11137.2104-43C723.78
thymus, neonate N06.CNhs11197.681-26C417.57
thymus, neonate N07.CNhs11211.713-19D322.10
thymus, neonate N10.CNhs11194.748-24E420.37
thymus, neonate N20.CNhs11186.820-7A217.83
thymus, neonate N25.CNhs11125.1362-25G721.46
thymus, neonate N30.CNhs11132.1393-42G223.84
tongue, adult.CNhs10499.32-1B422.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.17
urinary bladder, adult.CNhs10481.879-12E430.33
uterus, adult pregnant day19.CNhs10497.590-15F535.47
uterus, adult.CNhs10509.92-27E529.30
vagina, adult.CNhs10502.89-27D544.59
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I825.01
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H228.51
whole body, embryo E14.5.CNhs10578.420-27D226.74
whole body, embryo E14.CNhs10519.395-14B136.47
whole body, embryo E16.CNhs10514.453-14F227.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.75
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G525.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G526.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G524.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.03
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.66
whole body, embryo E17.5.CNhs10513.490-9F925.27
whole body, embryo E17.CNhs10517.475-3I539.72
whole body, embryo E18.CNhs10516.493-3B326.20
whole body, neonate N00.CNhs10525.657-19C230.94
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D134.63
whole body, neonate N10.CNhs10518.761-6B429.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell5.49e-1297
somatic stem cell6.54e-1291
multi fate stem cell6.54e-1291
motile cell6.13e-0954
ectodermal cell3.82e-0844
neurectodermal cell3.82e-0844
neural cell9.40e-0843
embryonic cell5.86e-0770
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