FFCP PHASE1:Mm9::chr12:99816316..99816331,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:99816316..99816331,- to FFCP PHASE1:Mm9::chr12:99816316..99816331,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72258 | |EntrezGene=72258 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BUW1 | |UniProt=Q8BUW1 | ||
|association_with_transcript=-166bp_to_ENSMUST00000110113,NM_029911,uc007oqi.1_5end | |||
|cluster_id=chr12:99816316..99816331,- | |||
|description=CAGE_peak_5_at_Kcnk10_5end | |||
|id=chr12:99816316..99816331,- | |||
|ontology_enrichment_celltype=CL:0000117!1.05e-09!23;CL:0000337!1.05e-09!23;CL:0002319!2.10e-08!43;CL:0000221!4.17e-08!44;CL:0000133!4.17e-08!44;CL:0000055!1.98e-07!50;CL:0002609!3.42e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.39e-10,3;CL:0000117,3.03e-07,23;CL:0000337,3.03e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.13e-27!50;UBERON:0006238!1.13e-27!50;UBERON:0002616!3.30e-26!49;UBERON:0001017!2.29e-23!73;UBERON:0005743!2.29e-23!73;UBERON:0000033!5.40e-23!63;UBERON:0000073!1.82e-22!75;UBERON:0001016!1.82e-22!75;UBERON:0001049!2.14e-20!52;UBERON:0005068!2.14e-20!52;UBERON:0006241!2.14e-20!52;UBERON:0007135!2.14e-20!52;UBERON:0004121!7.66e-17!102;UBERON:0000924!7.66e-17!102;UBERON:0006601!7.66e-17!102;UBERON:0003080!7.12e-16!40;UBERON:0002780!1.06e-14!39;UBERON:0001890!1.06e-14!39;UBERON:0006240!1.06e-14!39;UBERON:0007811!2.68e-14!86;UBERON:0002791!3.65e-14!29;UBERON:0003528!3.65e-14!29;UBERON:0001893!3.65e-14!29;UBERON:0002346!9.82e-14!71;UBERON:0003075!9.82e-14!71;UBERON:0007284!9.82e-14!71;UBERON:0003056!6.59e-13!49;UBERON:0000153!2.71e-12!94;UBERON:0002020!2.33e-11!34;UBERON:0000956!5.75e-09!21;UBERON:0001869!5.75e-09!21;UBERON:0000203!5.75e-09!21;UBERON:0004733!2.92e-08!6;UBERON:0004732!2.92e-08!6;UBERON:0002028!2.92e-08!6;UBERON:0007277!2.92e-08!6;UBERON:0002298!6.36e-08!6;UBERON:0002420!9.80e-07!8;UBERON:0007245!9.80e-07!8;UBERON:0010009!9.80e-07!8;UBERON:0010011!9.80e-07!8;UBERON:0000454!9.80e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.95e-29,6;UBERON:0004732,3.95e-29,6;UBERON:0002028,3.95e-29,6;UBERON:0007277,3.95e-29,6;UBERON:0003076,1.03e-20,12;UBERON:0003057,1.03e-20,12;UBERON:0002037,1.76e-16,4;UBERON:0002680,1.76e-16,4;UBERON:0001895,1.76e-16,4;UBERON:0010092,1.76e-16,4;UBERON:0006215,1.76e-16,4;UBERON:0001896,7.66e-15,2;UBERON:0002298,7.66e-15,2;UBERON:0005290,7.66e-15,2;UBERON:0010096,7.66e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0000073,3.57e-14,54;UBERON:0000955,1.48e-13,47;UBERON:0006238,1.48e-13,47;UBERON:0001049,3.38e-12,52;UBERON:0005068,3.38e-12,52;UBERON:0006241,3.38e-12,52;UBERON:0007135,3.38e-12,52;UBERON:0002616,3.38e-11,46;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0004684,8.39e-10,3;UBERON:0002275,8.39e-10,3;UBERON:0002346,1.02e-09,64;UBERON:0003075,1.02e-09,64;UBERON:0007284,1.02e-09,64;UBERON:0010371,2.19e-08,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.30815093828268,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,1.08004750665353,1.05162480675691,0,0,0.734944795289724,0.575072826109418,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,2.51264699101243,0,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6885054296582,15.2896095973822,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0.491804836130026,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.22510362412612,0,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.30815093828268,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,1.08004750665353,1.05162480675691,0,0,0.734944795289724,0.575072826109418,0,1.10115880999389,1.27687338085188,0.921639199537461,0.131886287730194,0.274462930807229,0,2.51264699101243,0,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6885054296582,15.2896095973822,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0.491804836130026,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.22510362412612,0,0,0,0.188368457004691,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Kcnk10 | |||
}} | }} |
Latest revision as of 00:29, 27 September 2015
Short description: | p5@Kcnk10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Kcnk10_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -166bp_to_ENSMUST00000110113, NM_029911, uc007oqi.1_5end |
EntrezGene: | Kcnk10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.39e-10 | 3 |
CNS neuron (sensu Vertebrata) | 3.03e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.03e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 3.95e-29 | 6 |
segmental subdivision of nervous system | 3.95e-29 | 6 |
hindbrain | 3.95e-29 | 6 |
presumptive hindbrain | 3.95e-29 | 6 |
posterior neural tube | 1.03e-20 | 12 |
chordal neural plate | 1.03e-20 | 12 |
cerebellum | 1.76e-16 | 4 |
regional part of metencephalon | 1.76e-16 | 4 |
metencephalon | 1.76e-16 | 4 |
future metencephalon | 1.76e-16 | 4 |
rhombic lip | 1.76e-16 | 4 |
medulla oblongata | 7.66e-15 | 2 |
brainstem | 7.66e-15 | 2 |
myelencephalon | 7.66e-15 | 2 |
future myelencephalon | 7.66e-15 | 2 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
regional part of nervous system | 3.57e-14 | 54 |
brain | 1.48e-13 | 47 |
future brain | 1.48e-13 | 47 |
neural tube | 3.38e-12 | 52 |
neural rod | 3.38e-12 | 52 |
future spinal cord | 3.38e-12 | 52 |
neural keel | 3.38e-12 | 52 |
regional part of brain | 3.38e-11 | 46 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
raphe nuclei | 8.39e-10 | 3 |
reticular formation | 8.39e-10 | 3 |
neurectoderm | 1.02e-09 | 64 |
neural plate | 1.02e-09 | 64 |
presumptive neural plate | 1.02e-09 | 64 |
ecto-epithelium | 2.19e-08 | 73 |