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FFCP PHASE1:Mm9::chr4:44085404..44085429,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:44085404..44085429,-
|DHSsupport=NA
|short_description=p5@Gne
|DPIdataset=NA
|description=CAGE_peak_5_at_Gne_5end
|association_with_transcript=44bp_to_ENSMUST00000173383_5end
|EntrezGene=50798
|EntrezGene=50798
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=G3UWV5
|UniProt=G3UWV5
|association_with_transcript=44bp_to_ENSMUST00000173383_5end
|cluster_id=chr4:44085404..44085429,-
|description=CAGE_peak_5_at_Gne_5end
|id=chr4:44085404..44085429,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000223,1.51e-09,20;CL:0000066,1.04e-08,25;CL:0002563,3.58e-08,9;CL:0002251,3.58e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!7.71e-08!15;UBERON:0001242!6.45e-07!13;UBERON:0000060!6.45e-07!13;UBERON:0001262!6.45e-07!13;UBERON:0004786!6.45e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.25e-12,15;UBERON:0000160,2.53e-11,31;UBERON:0001242,5.21e-11,13;UBERON:0001262,5.21e-11,13;UBERON:0004786,5.21e-11,13;UBERON:0001007,6.73e-11,116;UBERON:0001555,6.73e-11,116;UBERON:0007026,6.73e-11,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0004921,7.56e-10,114;UBERON:0005409,2.31e-09,47;UBERON:0009854,1.60e-08,23;UBERON:0009856,1.60e-08,23;UBERON:0003350,3.58e-08,9;UBERON:0004808,3.58e-08,9;UBERON:0001277,3.58e-08,9;UBERON:0002107,1.18e-07,22;UBERON:0007499,1.18e-07,22;UBERON:0006925,1.18e-07,22;UBERON:0009497,1.18e-07,22;UBERON:0000015,1.18e-07,22;UBERON:0002423,1.18e-07,22;UBERON:0006235,1.18e-07,22;UBERON:0008835,1.18e-07,22;UBERON:0003894,1.18e-07,22;UBERON:0004161,1.18e-07,22;UBERON:0008836,1.18e-07,22;UBERON:0002365,1.88e-07,25;UBERON:0002330,1.88e-07,25
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,3.0246421130683,7.01254021924886,1.34303417529512,1.16806320297763,0,0.422366166455,0.70219357896598,0.34243593645101,0.478632953972018,0.171200729931206,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0.522399578277871,2.07990149631429,1.60586496747019,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.66234645358492,2.04169356262369,0,1.5626706890476,0,0,0,0.485510353031154,0.755380907853464,1.92616169317078,1.46837401729345,0,0.436050312760893,0.659058548203415,0.972149495371417,0,0,1.51004345451963,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0,0.605809546665472,1.058001841495,0.579728977403356,7.74381489283248,12.2394840067395,16.7307989407723,16.2444104361917,32.7059627581055,5.47733238513832,0.340860645156116,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.51657333504435,6.96521666286266,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0,0.628332956648377,0.247194967734374,2.16899035379867,1.76922110389975,3.39710384889559,1.98757366614354,0,3.72783522436244,0.292780797011547,0,2.81002760729451,0.359445373517761,0,1.27070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.811206315338788,0.101839363850316,2.23932547098167,0.758168275301024,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,2.32833033665114,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,1.61047702512446,0.210289948564127,0.102904612379284,3.63460661282178,2.90895623329899,0,0,0.644337306610467,0.403367049246685,0,0.570676878337677,1.42358718463353,1.15289268306808,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.37751854862164,3.38540164532424,0,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,1.1105744752962,28.1629995732791,0,0,0,0.608580364165509,0,0,0.287696137450811,2.10775794807546,2.19649130550465,0,2.23284568601102,2.80833905803104,17.1753637004036,9.14926808961752,19.2977408545347,1.10851914099963,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,0,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0,1.15719246865209,0,0,0.983528546038072,3.03530420935206,0,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,1.67278158566786,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,2.76701444562566,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.847328283455281,1.98475558249466,1.31909002353184,0.968786560175433,0.603129249281559,0.477489376012546,0.492422699235184,2.33184669303881,0.927126510052548,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,1.35982743995084,0.279902904647316,1.10559979043539,2.86401185404534,0,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0.632022241256357,1.21635129174099,0.924398614483445,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0,0.269141569828427,0.167884616364078,3.28422309854724,1.12609485270709,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0.207574695168353,0,0,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.347652977834566,0.38581844092741,1.64834360321323,0.147198920134397,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.752875043322645,0.338458431566706,0.182927972872773,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.24905288968973,1.63752125911786,0.429742108096597,1.14772999241306,0.441182838239031,1.39120701372253
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,3.0246421130683,7.01254021924886,1.34303417529512,1.16806320297763,0,0.422366166455,0.70219357896598,0.34243593645101,0.478632953972018,0.171200729931206,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.255129870453209,0.297872853602656,0.522399578277871,2.07990149631429,1.60586496747019,1.14846392823004,0.430761996159075,1.29282739611533,2.09025761402011,1.26015064879965,1.10865255327652,0.635030673459631,0,0,1.1554064790051,1.66234645358492,2.04169356262369,0,1.5626706890476,0,0,0,0.485510353031154,0.755380907853464,1.92616169317078,1.46837401729345,0,0.436050312760893,0.659058548203415,0.972149495371417,0,0,1.51004345451963,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,0,0.7104801149461,0,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.122490799214954,0,0.919218786610021,2.20231761998777,0.255374676170375,0.307213066512487,0,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0,0.605809546665472,1.058001841495,0.579728977403356,7.74381489283248,12.2394840067395,16.7307989407723,16.2444104361917,32.7059627581055,5.47733238513832,0.340860645156116,0,0,0,0,0,0,0.865964164044856,1.52015919285059,1.51657333504435,6.96521666286266,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0,0.628332956648377,0.247194967734374,2.16899035379867,1.76922110389975,3.39710384889559,1.98757366614354,0,3.72783522436244,0.292780797011547,0,2.81002760729451,0.359445373517761,0,1.27070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0.811206315338788,0.101839363850316,2.23932547098167,0.758168275301024,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.476255494059295,0.512454881139399,0.281105173679186,2.32833033665114,0.215567992932842,0,0,0,0,0.696504333044333,0.411564272815887,0,0,0.51469581422943,0.568326998791185,0.207125772535502,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.771335564436891,0.232533944750408,1.07309360559848,0.583826711835847,0.658239399653922,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,1.61047702512446,0.210289948564127,0.102904612379284,3.63460661282178,2.90895623329899,0,0,0.644337306610467,0.403367049246685,0,0.570676878337677,1.42358718463353,1.15289268306808,0.502670417600539,1.1937388322469,0.779856348476481,0.898819408654221,2.37751854862164,3.38540164532424,0,0.114248512609729,0,0,0,0.140271639780637,0.442655759869801,0.885660887877613,0.31399745568275,1.1105744752962,28.1629995732791,0,0,0,0.608580364165509,0,0,0.287696137450811,2.10775794807546,2.19649130550465,0,2.23284568601102,2.80833905803104,17.1753637004036,9.14926808961752,19.2977408545347,1.10851914099963,0.189491411770485,0,0.339490171550376,0.469380496577004,0.670025029767263,0,0.390267295715598,0.630540576424764,0.221464689648775,0.478364305972461,0.327726629431476,0,1.15719246865209,0,0,0.983528546038072,3.03530420935206,0,0.586058432961016,0.163934945376675,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,1.67278158566786,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,2.76701444562566,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0.590603785761546,0.307435147943927,0.516856586336442,0,0,0,1.05418608574999,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0.913394847343798,0.938686832254841,0.847328283455281,1.98475558249466,1.31909002353184,0.968786560175433,0.603129249281559,0.477489376012546,0.492422699235184,2.33184669303881,0.927126510052548,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.457556346413045,1.35982743995084,0.279902904647316,1.10559979043539,2.86401185404534,0,0.203319467126849,0.432021363287205,0.209088296014469,1.52853794622324,0.539457385539283,1.40510874733071,1.30877970992015,1.29614973291793,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0.632022241256357,1.21635129174099,0.924398614483445,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.192423683280659,0.584384510907845,0.226730383615211,0,0.269141569828427,0.167884616364078,3.28422309854724,1.12609485270709,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0.207574695168353,0,0,0.486213434136588,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0,0.50695859978048,0,0.561849044819294,0.704276676453562,0.689225627467359,0.952587382566147,0.347652977834566,0.38581844092741,1.64834360321323,0.147198920134397,1.37147700954166,0.532427418478012,0.715308569841963,0.726732083161643,0.752875043322645,0.338458431566706,0.182927972872773,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.77468420592983,0.385813221962283,1.24905288968973,1.63752125911786,0.429742108096597,1.14772999241306,0.441182838239031,1.39120701372253
|short_description=p5@Gne
}}
}}

Latest revision as of 00:32, 27 September 2015

Short description:p5@Gne
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gne_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 44bp_to_ENSMUST00000173383_5end
EntrezGene:Gne
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gne

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F632.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B228.16
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A317.18
liver, neonate N25.CNhs11198.1368-26H19.15
liver, neonate N30.CNhs11106.1382-42D119.30
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
endodermal cell1.51e-0920
epithelial cell1.04e-0825
intestinal epithelial cell3.58e-089
epithelial cell of alimentary canal3.58e-089

Uber anatomy
Ontology termp-valuen
mucosa1.25e-1215
intestine2.53e-1131
intestinal mucosa5.21e-1113
wall of intestine5.21e-1113
gastrointestinal system mucosa5.21e-1113
digestive system6.73e-11116
digestive tract6.73e-11116
primitive gut6.73e-11116
endoderm-derived structure1.80e-10118
endoderm1.80e-10118
presumptive endoderm1.80e-10118
subdivision of digestive tract7.56e-10114
gastrointestinal system2.31e-0947
digestive tract diverticulum1.60e-0823
sac1.60e-0823
epithelium of mucosa3.58e-089
gastrointestinal system epithelium3.58e-089
intestinal epithelium3.58e-089
liver1.18e-0722
epithelial sac1.18e-0722
digestive gland1.18e-0722
epithelium of foregut-midgut junction1.18e-0722
anatomical boundary1.18e-0722
hepatobiliary system1.18e-0722
foregut-midgut junction1.18e-0722
hepatic diverticulum1.18e-0722
liver primordium1.18e-0722
septum transversum1.18e-0722
liver bud1.18e-0722
exocrine gland1.88e-0725
exocrine system1.88e-0725
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