FFCP PHASE1:Mm9::chr11:116780158..116780202,+: Difference between revisions
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{{FFCP|EntrezGene=268510|HGNC=|MCL_coexpression_id=13|UniProt=Q765H6|association_with_transcript=0bp_to_ENSMUST00000054088,ENSMUST00000103027,NM_172948,uc007mmu.1_5end|description=CAGE_peak_1_at_Mgat5b_5end|id=chr11:116780158..116780202,+|ontology_enrichment_celltype=CL:0000540!1.11e-16!33;CL:0000047!1.11e-16!33;CL:0000031!1.11e-16!33;CL:0000404!1.11e-16!33;CL:0000117!7.35e-16!23;CL:0000337!7.35e-16!23;CL:0000393!3.06e-12!39;CL:0000211!3.06e-12!39;CL:0000221!1.05e-11!44;CL:0000133!1.05e-11!44;CL:0002319!3.10e-11!43;CL:0000055!5.50e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.52e-21,23;CL:0000337,8.52e-21,23;CL:0000540,3.17e-19,33;CL:0000047,3.17e-19,33;CL:0000031,3.17e-19,33;CL:0000404,3.17e-19,33;CL:0000393,1.79e-14,39;CL:0000211,1.79e-14,39;CL:0000221,1.41e-13,44;CL:0000133,1.41e-13,44;CL:0002319,5.69e-13,43;CL:0002609,2.00e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.67e-30!73;UBERON:0005743!3.67e-30!73;UBERON:0004121!5.66e-29!102;UBERON:0000924!5.66e-29!102;UBERON:0006601!5.66e-29!102;UBERON:0000073!8.07e-29!75;UBERON:0001016!8.07e-29!75;UBERON:0002346!4.24e-28!71;UBERON:0003075!4.24e-28!71;UBERON:0007284!4.24e-28!71;UBERON:0000033!5.55e-26!63;UBERON:0001049!4.78e-25!52;UBERON:0005068!4.78e-25!52;UBERON:0006241!4.78e-25!52;UBERON:0007135!4.78e-25!52;UBERON:0003056!1.14e-23!49;UBERON:0000955!2.48e-23!50;UBERON:0006238!2.48e-23!50;UBERON:0002616!9.81e-23!49;UBERON:0003080!2.74e-21!40;UBERON:0002780!1.23e-20!39;UBERON:0001890!1.23e-20!39;UBERON:0006240!1.23e-20!39;UBERON:0002020!1.04e-19!34;UBERON:0007811!3.69e-18!86;UBERON:0000153!3.97e-17!94;UBERON:0002791!2.55e-16!29;UBERON:0003528!2.55e-16!29;UBERON:0001893!2.55e-16!29;UBERON:0000956!1.41e-11!21;UBERON:0001869!1.41e-11!21;UBERON:0000203!1.41e-11!21;UBERON:0002619!9.02e-09!17;UBERON:0002021!5.21e-07!10;UBERON:0000411!5.21e-07!10;UBERON:0001950!5.21e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.00e-38,73;UBERON:0001016,4.15e-36,75;UBERON:0002346,4.54e-36,64;UBERON:0003075,4.54e-36,64;UBERON:0007284,4.54e-36,64;UBERON:0000073,1.52e-35,54;UBERON:0001049,7.96e-34,52;UBERON:0005068,7.96e-34,52;UBERON:0006241,7.96e-34,52;UBERON:0007135,7.96e-34,52;UBERON:0004121,2.82e-33,95;UBERON:0000924,2.82e-33,95;UBERON:0006601,2.82e-33,95;UBERON:0010371,6.34e-32,73;UBERON:0003056,3.04e-30,49;UBERON:0000955,3.76e-29,47;UBERON:0006238,3.76e-29,47;UBERON:0002616,2.35e-28,46;UBERON:0003080,6.10e-28,40;UBERON:0002780,4.60e-27,39;UBERON:0001890,4.60e-27,39;UBERON:0006240,4.60e-27,39;UBERON:0002020,8.34e-26,34;UBERON:0010314,4.71e-23,92;UBERON:0003528,3.04e-21,29;UBERON:0002791,3.04e-21,29;UBERON:0001893,3.04e-21,29;UBERON:0000956,7.31e-15,21;UBERON:0001869,7.31e-15,21;UBERON:0000203,7.31e-15,21;UBERON:0002619,4.20e-11,17;UBERON:0002021,6.78e-09,10;UBERON:0000411,6.78e-09,10;UBERON:0001950,6.78e-09,10;UBERON:0002420,1.47e-07,8;UBERON:0007245,1.47e-07,8;UBERON:0010009,1.47e-07,8;UBERON:0010011,1.47e-07,8;UBERON:0000454,1.47e-07,8|phase1_expression=13.7728008510123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,26.3011399117477,24.3335850465135,20.9164363157039,0.338844532069132,0,0,0,0,0.898800331555214,2.30530983192933,30.2773667940755,34.1565023979177,28.3938697824366,19.7099179238624,13.9147180799517,23.0282702524114,25.2073588777962,26.6573448116906,8.8092704799511,12.257984456178,8.1411462625809,21.2336923245612,21.9570344645783,12.5019208933622,7.2587579740359,5.6276261003168,7.33431589328689,19.4454866412621,16.657486653495,22.5543329448614,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,8.02807492727079,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,2.25530924795977,0.913396434936424,1.15307748628029,1.05505848386836,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,4.81727425670947,0,0,0,0,14.0803201040533,22.4175295381127,34.0523294225863,15.2965401769203,13.5529192385075,13.5062228963714,19.1444690419954,0.101839363850316,0,0,0.631325567659422,2.08192708740326,2.98872735763515,3.42118046630164,1.9591626318643,3.81004395247436,4.22775276940004,6.74652416830048,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.946978942340841,0.393528463494808,0.154267112887378,0.697601834251224,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0,9.46304768538573,24.2854885215111,0,0,0.639864751605702,1.39342003116263,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0,0,0,0.596869416123452,0.38992817423824,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.16296497644202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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268510 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q765H6 | |||
|association_with_transcript=0bp_to_ENSMUST00000054088,ENSMUST00000103027,NM_172948,uc007mmu.1_5end | |||
|cluster_id=chr11:116780158..116780202,+ | |||
|description=CAGE_peak_1_at_Mgat5b_5end | |||
|id=chr11:116780158..116780202,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.11e-16!33;CL:0000047!1.11e-16!33;CL:0000031!1.11e-16!33;CL:0000404!1.11e-16!33;CL:0000117!7.35e-16!23;CL:0000337!7.35e-16!23;CL:0000393!3.06e-12!39;CL:0000211!3.06e-12!39;CL:0000221!1.05e-11!44;CL:0000133!1.05e-11!44;CL:0002319!3.10e-11!43;CL:0000055!5.50e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.52e-21,23;CL:0000337,8.52e-21,23;CL:0000540,3.17e-19,33;CL:0000047,3.17e-19,33;CL:0000031,3.17e-19,33;CL:0000404,3.17e-19,33;CL:0000393,1.79e-14,39;CL:0000211,1.79e-14,39;CL:0000221,1.41e-13,44;CL:0000133,1.41e-13,44;CL:0002319,5.69e-13,43;CL:0002609,2.00e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.67e-30!73;UBERON:0005743!3.67e-30!73;UBERON:0004121!5.66e-29!102;UBERON:0000924!5.66e-29!102;UBERON:0006601!5.66e-29!102;UBERON:0000073!8.07e-29!75;UBERON:0001016!8.07e-29!75;UBERON:0002346!4.24e-28!71;UBERON:0003075!4.24e-28!71;UBERON:0007284!4.24e-28!71;UBERON:0000033!5.55e-26!63;UBERON:0001049!4.78e-25!52;UBERON:0005068!4.78e-25!52;UBERON:0006241!4.78e-25!52;UBERON:0007135!4.78e-25!52;UBERON:0003056!1.14e-23!49;UBERON:0000955!2.48e-23!50;UBERON:0006238!2.48e-23!50;UBERON:0002616!9.81e-23!49;UBERON:0003080!2.74e-21!40;UBERON:0002780!1.23e-20!39;UBERON:0001890!1.23e-20!39;UBERON:0006240!1.23e-20!39;UBERON:0002020!1.04e-19!34;UBERON:0007811!3.69e-18!86;UBERON:0000153!3.97e-17!94;UBERON:0002791!2.55e-16!29;UBERON:0003528!2.55e-16!29;UBERON:0001893!2.55e-16!29;UBERON:0000956!1.41e-11!21;UBERON:0001869!1.41e-11!21;UBERON:0000203!1.41e-11!21;UBERON:0002619!9.02e-09!17;UBERON:0002021!5.21e-07!10;UBERON:0000411!5.21e-07!10;UBERON:0001950!5.21e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.00e-38,73;UBERON:0001016,4.15e-36,75;UBERON:0002346,4.54e-36,64;UBERON:0003075,4.54e-36,64;UBERON:0007284,4.54e-36,64;UBERON:0000073,1.52e-35,54;UBERON:0001049,7.96e-34,52;UBERON:0005068,7.96e-34,52;UBERON:0006241,7.96e-34,52;UBERON:0007135,7.96e-34,52;UBERON:0004121,2.82e-33,95;UBERON:0000924,2.82e-33,95;UBERON:0006601,2.82e-33,95;UBERON:0010371,6.34e-32,73;UBERON:0003056,3.04e-30,49;UBERON:0000955,3.76e-29,47;UBERON:0006238,3.76e-29,47;UBERON:0002616,2.35e-28,46;UBERON:0003080,6.10e-28,40;UBERON:0002780,4.60e-27,39;UBERON:0001890,4.60e-27,39;UBERON:0006240,4.60e-27,39;UBERON:0002020,8.34e-26,34;UBERON:0010314,4.71e-23,92;UBERON:0003528,3.04e-21,29;UBERON:0002791,3.04e-21,29;UBERON:0001893,3.04e-21,29;UBERON:0000956,7.31e-15,21;UBERON:0001869,7.31e-15,21;UBERON:0000203,7.31e-15,21;UBERON:0002619,4.20e-11,17;UBERON:0002021,6.78e-09,10;UBERON:0000411,6.78e-09,10;UBERON:0001950,6.78e-09,10;UBERON:0002420,1.47e-07,8;UBERON:0007245,1.47e-07,8;UBERON:0010009,1.47e-07,8;UBERON:0010011,1.47e-07,8;UBERON:0000454,1.47e-07,8 | |||
|phase1_expression=13.7728008510123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,26.3011399117477,24.3335850465135,20.9164363157039,0.338844532069132,0,0,0,0,0.898800331555214,2.30530983192933,30.2773667940755,34.1565023979177,28.3938697824366,19.7099179238624,13.9147180799517,23.0282702524114,25.2073588777962,26.6573448116906,8.8092704799511,12.257984456178,8.1411462625809,21.2336923245612,21.9570344645783,12.5019208933622,7.2587579740359,5.6276261003168,7.33431589328689,19.4454866412621,16.657486653495,22.5543329448614,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,8.02807492727079,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,2.25530924795977,0.913396434936424,1.15307748628029,1.05505848386836,0.823120949949934,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,4.81727425670947,0,0,0,0,14.0803201040533,22.4175295381127,34.0523294225863,15.2965401769203,13.5529192385075,13.5062228963714,19.1444690419954,0.101839363850316,0,0,0.631325567659422,2.08192708740326,2.98872735763515,3.42118046630164,1.9591626318643,3.81004395247436,4.22775276940004,6.74652416830048,1.29351685369508,1.07783996466421,1.32374256117473,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,0.828503090142008,0.703578179943289,0.36012412292203,0.946978942340841,0.393528463494808,0.154267112887378,0.697601834251224,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0,9.46304768538573,24.2854885215111,0,0,0.639864751605702,1.39342003116263,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0,0,0,0.596869416123452,0.38992817423824,0,0,0,0,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0275294993896,8.20481806145422,0,0,1.89304931649754,1.17131623288992,0.430846795465598,0.716906393857656,1.33679204449436,1.41538265394416,1.61924280669958,2.63030272120181,0.790575555893047,11.5675673911851,0,0,0.488660878060728,0.164970122972535,0,0.485561272309963,1.209294227859,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,2.16073312837572,2.19909762430683,7.28745919107414,15.7832807941623,11.9507107793387,7.73380396829969,4.56697423671899,0,0,0.220528398054962,0.32977250588296,0,0.241251699712623,0.954978752025092,0.492422699235184,0,7.23158677840988,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0.949007980743406,0.813277868507395,0.648032044930808,1.04544148007234,0.218362563746178,0.404593039154462,0.743881101528023,0,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0.337912250981556,0.117357238645754,0,1.15345278868282,0.483168241652012,0,0.316011120628178,0.608175645870493,0.410843828659309,0.51968329191118,0.179026695667481,0.198681354781265,0.841368146639782,0.147689527174577,0.504832249740738,0.304827226619999,0.907435666231565,0.38983152295901,0.288635524920988,0.233753804363138,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0,1.2862102744744,0,14.6835479080437,7.82552902062201,14.3223878359849,13.9201077698387,7.53590771747707,22.661816921691,17.550585006027,10.8077088773813,9.5159905886683,12.9440077937955,0.93408612825759,5.58634822761443,3.75613932659095,3.8897074730927,2.30574478890781,2.20612210140017,3.11145418922261,4.53277125925567,3.53011130550997,3.53776096469316,3.54871019846336,4.33840585187975,4.12022632867483,4.48176066834085,2.75690250986944,4.28664322154766,3.24476112645595,3.8581844092741,2.47251540481984,3.09117732282234,3.08582327146874,1.24233064311536,2.62279808942053,2.0348498328526,3.01150017329058,4.3153450024755,2.56099162021882,3.41990624869196,2.98769050460896,2.24456908663095,4.50813068871862,2.56111654176465,2.04615521584845,2.63392630016142,2.70069255373598,12.7403394748352,3.04111090979031,2.14871054048298,0.956441660344217,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Mgat5b | |||
}} |
Latest revision as of 00:47, 27 September 2015
Short description: | p1@Mgat5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mgat5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000054088, ENSMUST00000103027, NM_172948, uc007mmu.1_5end |
EntrezGene: | Mgat5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.52e-21 | 23 |
neuroblast (sensu Vertebrata) | 8.52e-21 | 23 |
neuron | 3.17e-19 | 33 |
neuronal stem cell | 3.17e-19 | 33 |
neuroblast | 3.17e-19 | 33 |
electrically signaling cell | 3.17e-19 | 33 |
electrically responsive cell | 1.79e-14 | 39 |
electrically active cell | 1.79e-14 | 39 |
ectodermal cell | 1.41e-13 | 44 |
neurectodermal cell | 1.41e-13 | 44 |
neural cell | 5.69e-13 | 43 |
neuron of cerebral cortex | 2.00e-07 | 6 |