FFCP PHASE1:Mm9::chr17:91492055..91492162,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18189 | |EntrezGene=18189 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=E0CZA5,E0CY11,Q9CS84 | |UniProt=E0CZA5,E0CY11,Q9CS84 | ||
|association_with_transcript=0bp_to_ENSMUST00000159419,ENSMUST00000159778,ENSMUST00000160467,ENSMUST00000160800,ENSMUST00000161102,ENSMUST00000161402,ENSMUST00000162002,NM_020252,NM_177284,uc008dvz.2,uc008dwe.1,uc008dwf.1,uc008dwh.1,uc012ayq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000159419,ENSMUST00000159778,ENSMUST00000160467,ENSMUST00000160800,ENSMUST00000161102,ENSMUST00000161402,ENSMUST00000162002,NM_020252,NM_177284,uc008dvz.2,uc008dwe.1,uc008dwf.1,uc008dwh.1,uc012ayq.1_5end | ||
|cluster_id=chr17:91492055..91492162,- | |||
|description=CAGE_peak_1_at_Nrxn1_5end | |description=CAGE_peak_1_at_Nrxn1_5end | ||
|id=chr17:91492055..91492162,- | |id=chr17:91492055..91492162,- | ||
|ontology_enrichment_celltype=CL:0002319!1.88e-12!43;CL:0000540!2.78e-12!33;CL:0000047!2.78e-12!33;CL:0000031!2.78e-12!33;CL:0000404!2.78e-12!33;CL:0000221!2.98e-12!44;CL:0000133!2.98e-12!44;CL:0000117!6.08e-12!23;CL:0000337!6.08e-12!23;CL:0000055!9.57e-09!50;CL:0000393!8.72e-08!39;CL:0000211!8.72e-08!39 | |ontology_enrichment_celltype=CL:0002319!1.88e-12!43;CL:0000540!2.78e-12!33;CL:0000047!2.78e-12!33;CL:0000031!2.78e-12!33;CL:0000404!2.78e-12!33;CL:0000221!2.98e-12!44;CL:0000133!2.98e-12!44;CL:0000117!6.08e-12!23;CL:0000337!6.08e-12!23;CL:0000055!9.57e-09!50;CL:0000393!8.72e-08!39;CL:0000211!8.72e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.40e-13,43;CL:0000540,6.65e-13,33;CL:0000047,6.65e-13,33;CL:0000031,6.65e-13,33;CL:0000404,6.65e-13,33;CL:0000221,7.15e-13,44;CL:0000133,7.15e-13,44;CL:0000117,1.52e-12,23;CL:0000337,1.52e-12,23;CL:0000393,1.80e-08,39;CL:0000211,1.80e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-31!73;UBERON:0005743!1.26e-31!73;UBERON:0000073!2.99e-31!75;UBERON:0001016!2.99e-31!75;UBERON:0004121!2.56e-28!102;UBERON:0000924!2.56e-28!102;UBERON:0006601!2.56e-28!102;UBERON:0002346!2.95e-28!71;UBERON:0003075!2.95e-28!71;UBERON:0007284!2.95e-28!71;UBERON:0001049!7.56e-26!52;UBERON:0005068!7.56e-26!52;UBERON:0006241!7.56e-26!52;UBERON:0007135!7.56e-26!52;UBERON:0000955!8.23e-25!50;UBERON:0006238!8.23e-25!50;UBERON:0000033!2.25e-24!63;UBERON:0002616!4.20e-24!49;UBERON:0003056!2.16e-20!49;UBERON:0003080!1.21e-19!40;UBERON:0002780!5.51e-19!39;UBERON:0001890!5.51e-19!39;UBERON:0006240!5.51e-19!39;UBERON:0002020!2.60e-18!34;UBERON:0002791!1.64e-15!29;UBERON:0003528!1.64e-15!29;UBERON:0001893!1.64e-15!29;UBERON:0000025!1.15e-12!114;UBERON:0004111!1.26e-11!122;UBERON:0000956!2.66e-11!21;UBERON:0001869!2.66e-11!21;UBERON:0000203!2.66e-11!21;UBERON:0007811!5.59e-11!86;UBERON:0002619!1.44e-09!17;UBERON:0000153!4.09e-09!94;UBERON:0000468!1.44e-08!333;UBERON:0002021!4.36e-08!10;UBERON:0000411!4.36e-08!10;UBERON:0001950!4.36e-08!10;UBERON:0000479!6.87e-07!349;UBERON:0003076!9.47e-07!12;UBERON:0003057!9.47e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!1.26e-31!73;UBERON:0005743!1.26e-31!73;UBERON:0000073!2.99e-31!75;UBERON:0001016!2.99e-31!75;UBERON:0004121!2.56e-28!102;UBERON:0000924!2.56e-28!102;UBERON:0006601!2.56e-28!102;UBERON:0002346!2.95e-28!71;UBERON:0003075!2.95e-28!71;UBERON:0007284!2.95e-28!71;UBERON:0001049!7.56e-26!52;UBERON:0005068!7.56e-26!52;UBERON:0006241!7.56e-26!52;UBERON:0007135!7.56e-26!52;UBERON:0000955!8.23e-25!50;UBERON:0006238!8.23e-25!50;UBERON:0000033!2.25e-24!63;UBERON:0002616!4.20e-24!49;UBERON:0003056!2.16e-20!49;UBERON:0003080!1.21e-19!40;UBERON:0002780!5.51e-19!39;UBERON:0001890!5.51e-19!39;UBERON:0006240!5.51e-19!39;UBERON:0002020!2.60e-18!34;UBERON:0002791!1.64e-15!29;UBERON:0003528!1.64e-15!29;UBERON:0001893!1.64e-15!29;UBERON:0000025!1.15e-12!114;UBERON:0004111!1.26e-11!122;UBERON:0000956!2.66e-11!21;UBERON:0001869!2.66e-11!21;UBERON:0000203!2.66e-11!21;UBERON:0007811!5.59e-11!86;UBERON:0002619!1.44e-09!17;UBERON:0000153!4.09e-09!94;UBERON:0000468!1.44e-08!333;UBERON:0002021!4.36e-08!10;UBERON:0000411!4.36e-08!10;UBERON:0001950!4.36e-08!10;UBERON:0000479!6.87e-07!349;UBERON:0003076!9.47e-07!12;UBERON:0003057!9.47e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-33,73;UBERON:0001016,5.56e-33,75;UBERON:0000073,1.17e-28,54;UBERON:0002346,2.74e-28,64;UBERON:0003075,2.74e-28,64;UBERON:0007284,2.74e-28,64;UBERON:0001049,2.91e-27,52;UBERON:0005068,2.91e-27,52;UBERON:0006241,2.91e-27,52;UBERON:0007135,2.91e-27,52;UBERON:0004121,1.24e-26,95;UBERON:0000924,1.24e-26,95;UBERON:0006601,1.24e-26,95;UBERON:0000955,3.75e-24,47;UBERON:0006238,3.75e-24,47;UBERON:0002616,2.04e-23,46;UBERON:0010371,4.43e-22,73;UBERON:0003056,4.17e-21,49;UBERON:0003080,1.08e-20,40;UBERON:0002780,5.36e-20,39;UBERON:0001890,5.36e-20,39;UBERON:0006240,5.36e-20,39;UBERON:0010314,5.89e-20,92;UBERON:0002020,2.76e-19,34;UBERON:0003528,2.54e-16,29;UBERON:0002791,2.54e-16,29;UBERON:0001893,2.54e-16,29;UBERON:0000025,5.34e-12,114;UBERON:0000956,7.24e-12,21;UBERON:0001869,7.24e-12,21;UBERON:0000203,7.24e-12,21;UBERON:0004111,7.58e-11,122;UBERON:0002619,4.94e-10,17;UBERON:0002021,1.82e-08,10;UBERON:0000411,1.82e-08,10;UBERON:0001950,1.82e-08,10;UBERON:0011216,1.52e-07,194;UBERON:0003076,4.72e-07,12;UBERON:0003057,4.72e-07,12 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,55.1930953080443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,21.8025156380447,5.27246838562732,10.1103547518627,11.8988458381558,18.6878333674463,0,0,0,0,0.286533439938757,0,64.9435839359309,93.6314033311498,77.96126263126,4.40497891689872,1.77858959222228,0,0.988866362566974,0,7.78960287347852,13.4476406862544,35.3581577971909,30.7813539396255,29.0248446664907,115.68864868354,99.8325805101293,34.2974237801871,22.5236856892855,22.0612508786405,137.644851249236,201.618306836511,171.885710713736,80.8462943786088,83.070780390988,93.24349332966,106.368722619526,171.079833449631,167.466879563384,171.179208160201,204.73047698911,77.542169463325,2.12033341332915,4.08086424576642,2.6087803983151,25.8127163094416,0,2.15881276655127,5.84798775702902,2.24013443548668,10.2524426696179,0,0,0,1.97180787687353,0,0,0,0,0,0,9.59144589640104,7.76813650941515,23.8991843894368,9.02123699183906,13.7009465240464,11.3001593655469,11.1534754008941,19.519725384527,6.1576629751541,0,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,426.874402042836,445.912038805846,1.02182822083437,0,0,0,248.502670772601,176.59523268799,74.13606774659,391.104720432622,337.800119133367,224.203300079765,216.105362406253,0.305518091550949,0.124406970610093,0,11.3638602178696,0.780722657776222,7.81667155073808,10.0834792690996,15.8240058727501,16.39679629547,21.2668775672851,21.082888025939,41.6512426889815,0,0.945530400839096,0.703804496655795,0.43839146485515,3.05851974148158,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,1.18372367792605,1.37734962223183,1.69693824176116,0.930135779001631,1.07309360559848,1.05088808130453,0.987359099480883,0.985004784474571,3.16168357228837,3.80119967305864,2.85415149878366,2.28150911892632,272.325483390545,102.801707766905,0.330418782983798,0,1.49301775374664,2.78684006232526,3.8660238396628,4.43703754171354,6.44896327150124,4.56541502670142,1.89811624617805,2.79988223030818,3.2673577144035,3.97912944082302,3.70431765526328,1.79763881730844,1.08069024937347,0.995706366271836,0.379335801906163,2.28497025219458,2.25415471346161,1.4255592949172,1.35766741017338,1.33258057791605,0.758838445491087,0.442830443938806,0.156998727841375,0,13.3403682189217,0,0.196558995113203,0.674586337154561,0.608580364165509,0.964708639009667,2.5462585178142,1.72617682470486,3.72911021582581,1.64736847912849,7.18841032636773,6.69853705803306,12.4815069245824,12.6289438973556,11.4814344654024,12.0610880340842,1.29327233116623,1.13694847062291,1.79261474086228,4.41337223015489,9.15291968325158,9.5478566741835,15.4728366575909,11.1226179278945,10.0886492227962,11.2946991720875,13.3942005672289,17.0417847304368,10.0157289482219,8.10034728056465,0,0,0.491764273019036,0.551873492609465,191.21575267546,180.388785665401,0,0,9.4652465824877,12.4940398174924,20.4652227846159,3.82350076724083,10.4715376818725,11.0399847007645,12.9539424535966,20.4579100537918,13.4397844501818,289.83182741247,1.84522110770749,0.35613120733451,0.651547837414304,0,1.32745138339963,0.485561272309963,1.209294227859,0.943025398779491,0.295301892880773,1.53717573971964,3.10113951801865,1.45413491791002,1.06949213515416,1.26414703174326,0,1.03135543248187,157.623537464004,8.28281032544027,5.56242340265844,26.3634553088859,51.4286677562593,35.495394702812,39.3272159239069,16.1366423030738,0,0.21183207086382,3.52845436887939,1.15420377059036,0.161464426695906,0.72375509913787,0.954978752025092,0,1.45740418314925,165.213944091364,0.341741761595705,0.82554747185289,0.925972636848558,0,1.50363650493128,0.457556346413045,0,0,0,0,1.73984796469624,3.86306987541013,4.96824567780286,4.39085421630384,4.58561383866973,3.9110660451598,4.62859352061881,2.87931536182433,3.75883422546199,0.621339313086926,0,0.747582730219894,0.827292452285488,1.55560950675238,1.03327858782185,0.844780627453891,2.8165737274981,1.0416350787516,0.524296722128554,0,0,0.632022241256357,0.608175645870493,0.410843828659309,1.29920822977795,2.14832034800978,0.596044064343795,0,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0.584747284438515,0.288635524920988,0.233753804363138,2.94749498699775,0,0,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,374.995223497732,390.816125794593,401.026859407578,525.355178424653,321.303701772431,376.941554797461,343.586452617989,305.317775786021,344.84137323698,281.143849281238,2.59468368960442,9.57659696162474,15.8782253351345,24.0675649897611,12.9960160829349,14.1559501506511,33.1147624424407,35.6440649023287,33.3755977975488,25.7751155999073,32.6988296858409,32.066478035633,30.9953389725311,31.6924504404103,33.3125719942557,35.7220268462305,30.0140404197176,19.4838312668342,25.549325849805,27.5261980651323,29.4867557051457,28.5736047916533,26.4664170841526,32.9936365755386,28.4210328854298,32.4920094304038,28.5367637681525,24.991622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| |phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,55.1930953080443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,1.56478268869608,21.8025156380447,5.27246838562732,10.1103547518627,11.8988458381558,18.6878333674463,0,0,0,0,0.286533439938757,0,64.9435839359309,93.6314033311498,77.96126263126,4.40497891689872,1.77858959222228,0,0.988866362566974,0,7.78960287347852,13.4476406862544,35.3581577971909,30.7813539396255,29.0248446664907,115.68864868354,99.8325805101293,34.2974237801871,22.5236856892855,22.0612508786405,137.644851249236,201.618306836511,171.885710713736,80.8462943786088,83.070780390988,93.24349332966,106.368722619526,171.079833449631,167.466879563384,171.179208160201,204.73047698911,77.542169463325,2.12033341332915,4.08086424576642,2.6087803983151,25.8127163094416,0,2.15881276655127,5.84798775702902,2.24013443548668,10.2524426696179,0,0,0,1.97180787687353,0,0,0,0,0,0,9.59144589640104,7.76813650941515,23.8991843894368,9.02123699183906,13.7009465240464,11.3001593655469,11.1534754008941,19.519725384527,6.1576629751541,0,0,0,0.161766849947409,0.220841518460394,0,1.86391761218122,426.874402042836,445.912038805846,1.02182822083437,0,0,0,248.502670772601,176.59523268799,74.13606774659,391.104720432622,337.800119133367,224.203300079765,216.105362406253,0.305518091550949,0.124406970610093,0,11.3638602178696,0.780722657776222,7.81667155073808,10.0834792690996,15.8240058727501,16.39679629547,21.2668775672851,21.082888025939,41.6512426889815,0,0.945530400839096,0.703804496655795,0.43839146485515,3.05851974148158,0.348252166522167,0,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.900310307305074,1.18372367792605,1.37734962223183,1.69693824176116,0.930135779001631,1.07309360559848,1.05088808130453,0.987359099480883,0.985004784474571,3.16168357228837,3.80119967305864,2.85415149878366,2.28150911892632,272.325483390545,102.801707766905,0.330418782983798,0,1.49301775374664,2.78684006232526,3.8660238396628,4.43703754171354,6.44896327150124,4.56541502670142,1.89811624617805,2.79988223030818,3.2673577144035,3.97912944082302,3.70431765526328,1.79763881730844,1.08069024937347,0.995706366271836,0.379335801906163,2.28497025219458,2.25415471346161,1.4255592949172,1.35766741017338,1.33258057791605,0.758838445491087,0.442830443938806,0.156998727841375,0,13.3403682189217,0,0.196558995113203,0.674586337154561,0.608580364165509,0.964708639009667,2.5462585178142,1.72617682470486,3.72911021582581,1.64736847912849,7.18841032636773,6.69853705803306,12.4815069245824,12.6289438973556,11.4814344654024,12.0610880340842,1.29327233116623,1.13694847062291,1.79261474086228,4.41337223015489,9.15291968325158,9.5478566741835,15.4728366575909,11.1226179278945,10.0886492227962,11.2946991720875,13.3942005672289,17.0417847304368,10.0157289482219,8.10034728056465,0,0,0.491764273019036,0.551873492609465,191.21575267546,180.388785665401,0,0,9.4652465824877,12.4940398174924,20.4652227846159,3.82350076724083,10.4715376818725,11.0399847007645,12.9539424535966,20.4579100537918,13.4397844501818,289.83182741247,1.84522110770749,0.35613120733451,0.651547837414304,0,1.32745138339963,0.485561272309963,1.209294227859,0.943025398779491,0.295301892880773,1.53717573971964,3.10113951801865,1.45413491791002,1.06949213515416,1.26414703174326,0,1.03135543248187,157.623537464004,8.28281032544027,5.56242340265844,26.3634553088859,51.4286677562593,35.495394702812,39.3272159239069,16.1366423030738,0,0.21183207086382,3.52845436887939,1.15420377059036,0.161464426695906,0.72375509913787,0.954978752025092,0,1.45740418314925,165.213944091364,0.341741761595705,0.82554747185289,0.925972636848558,0,1.50363650493128,0.457556346413045,0,0,0,0,1.73984796469624,3.86306987541013,4.96824567780286,4.39085421630384,4.58561383866973,3.9110660451598,4.62859352061881,2.87931536182433,3.75883422546199,0.621339313086926,0,0.747582730219894,0.827292452285488,1.55560950675238,1.03327858782185,0.844780627453891,2.8165737274981,1.0416350787516,0.524296722128554,0,0,0.632022241256357,0.608175645870493,0.410843828659309,1.29920822977795,2.14832034800978,0.596044064343795,0,0.295379054349154,0.302899349844443,0.228620419965,0.201652370273681,0.584747284438515,0.288635524920988,0.233753804363138,2.94749498699775,0,0,0,2.51146472241848,0.563047426353546,0.36630324853453,0.214368379079066,0,374.995223497732,390.816125794593,401.026859407578,525.355178424653,321.303701772431,376.941554797461,343.586452617989,305.317775786021,344.84137323698,281.143849281238,2.59468368960442,9.57659696162474,15.8782253351345,24.0675649897611,12.9960160829349,14.1559501506511,33.1147624424407,35.6440649023287,33.3755977975488,25.7751155999073,32.6988296858409,32.066478035633,30.9953389725311,31.6924504404103,33.3125719942557,35.7220268462305,30.0140404197176,19.4838312668342,25.549325849805,27.5261980651323,29.4867557051457,28.5736047916533,26.4664170841526,32.9936365755386,28.4210328854298,32.4920094304038,28.5367637681525,24.991622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| ||
|short_description=p1@Nrxn1 | |short_description=p1@Nrxn1 | ||
}} | }} |
Latest revision as of 00:59, 27 September 2015
Short description: | p1@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000159419, ENSMUST00000159778, ENSMUST00000160467, ENSMUST00000160800, ENSMUST00000161102, ENSMUST00000161402, ENSMUST00000162002, NM_020252, NM_177284, uc008dvz.2, uc008dwe.1, uc008dwf.1, uc008dwh.1, uc012ayq.1_5end |
EntrezGene: | Nrxn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.40e-13 | 43 |
neuron | 6.65e-13 | 33 |
neuronal stem cell | 6.65e-13 | 33 |
neuroblast | 6.65e-13 | 33 |
electrically signaling cell | 6.65e-13 | 33 |
ectodermal cell | 7.15e-13 | 44 |
neurectodermal cell | 7.15e-13 | 44 |
CNS neuron (sensu Vertebrata) | 1.52e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-12 | 23 |
electrically responsive cell | 1.80e-08 | 39 |
electrically active cell | 1.80e-08 | 39 |