FFCP PHASE1:Mm9::chr1:21208906..21208939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75712 | |EntrezGene=75712 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D3YV08,E9PWC2 | |UniProt=D3YV08,E9PWC2 | ||
|association_with_transcript=163bp_to_ENSMUST00000027064,ENSMUST00000165595_5end | |association_with_transcript=163bp_to_ENSMUST00000027064,ENSMUST00000165595_5end | ||
|cluster_id=chr1:21208906..21208939,+ | |||
|description=CAGE_peak_1_at_Tmem14a_5end | |description=CAGE_peak_1_at_Tmem14a_5end | ||
|id=chr1:21208906..21208939,+ | |id=chr1:21208906..21208939,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.12e-07!50 | |ontology_enrichment_celltype=CL:0000055!1.12e-07!50 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.54e-21!73;UBERON:0005743!7.54e-21!73;UBERON:0000073!5.53e-20!75;UBERON:0001016!5.53e-20!75;UBERON:0001049!3.84e-15!52;UBERON:0005068!3.84e-15!52;UBERON:0006241!3.84e-15!52;UBERON:0007135!3.84e-15!52;UBERON:0000955!5.52e-15!50;UBERON:0006238!5.52e-15!50;UBERON:0002616!1.62e-14!49;UBERON:0004121!1.64e-14!102;UBERON:0000924!1.64e-14!102;UBERON:0006601!1.64e-14!102;UBERON:0002346!3.39e-14!71;UBERON:0003075!3.39e-14!71;UBERON:0007284!3.39e-14!71;UBERON:0000033!2.57e-13!63;UBERON:0004111!2.53e-11!122;UBERON:0000025!8.15e-11!114;UBERON:0003080!8.27e-10!40;UBERON:0002780!2.68e-09!39;UBERON:0001890!2.68e-09!39;UBERON:0006240!2.68e-09!39;UBERON:0003056!4.40e-09!49;UBERON:0002020!3.38e-08!34;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!7.54e-21!73;UBERON:0005743!7.54e-21!73;UBERON:0000073!5.53e-20!75;UBERON:0001016!5.53e-20!75;UBERON:0001049!3.84e-15!52;UBERON:0005068!3.84e-15!52;UBERON:0006241!3.84e-15!52;UBERON:0007135!3.84e-15!52;UBERON:0000955!5.52e-15!50;UBERON:0006238!5.52e-15!50;UBERON:0002616!1.62e-14!49;UBERON:0004121!1.64e-14!102;UBERON:0000924!1.64e-14!102;UBERON:0006601!1.64e-14!102;UBERON:0002346!3.39e-14!71;UBERON:0003075!3.39e-14!71;UBERON:0007284!3.39e-14!71;UBERON:0000033!2.57e-13!63;UBERON:0004111!2.53e-11!122;UBERON:0000025!8.15e-11!114;UBERON:0003080!8.27e-10!40;UBERON:0002780!2.68e-09!39;UBERON:0001890!2.68e-09!39;UBERON:0006240!2.68e-09!39;UBERON:0003056!4.40e-09!49;UBERON:0002020!3.38e-08!34;UBERON:0002021!1.19e-07!10;UBERON:0000411!1.19e-07!10;UBERON:0001950!1.19e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.91e-21,73;UBERON:0001016,7.63e-20,75;UBERON:0000073,3.18e-16,54;UBERON:0001049,4.98e-15,52;UBERON:0005068,4.98e-15,52;UBERON:0006241,4.98e-15,52;UBERON:0007135,4.98e-15,52;UBERON:0002346,1.57e-14,64;UBERON:0003075,1.57e-14,64;UBERON:0007284,1.57e-14,64;UBERON:0004121,4.60e-14,95;UBERON:0000924,4.60e-14,95;UBERON:0006601,4.60e-14,95;UBERON:0000955,4.53e-13,47;UBERON:0006238,4.53e-13,47;UBERON:0002616,1.30e-12,46;UBERON:0004111,1.14e-10,122;UBERON:0010371,1.23e-10,73;UBERON:0010314,1.76e-10,92;UBERON:0000025,2.90e-10,114;UBERON:0003080,1.21e-09,40;UBERON:0002780,3.96e-09,39;UBERON:0001890,3.96e-09,39;UBERON:0006240,3.96e-09,39;UBERON:0003056,6.07e-09,49;UBERON:0002020,5.16e-08,34;UBERON:0002021,9.15e-08,10;UBERON:0000411,9.15e-08,10;UBERON:0001950,9.15e-08,10 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0,0.60492842261366,1.00179145989269,1.34303417529512,1.86890112476421,1.29123323441576,0.140788722151667,0,0.171217968225505,0.159544317990673,1.36960583944965,1.22388563386596,0.333109761815663,0.607425802169478,0,0.946386496074713,0.959801035240171,1.27316895539409,4.16712121740242,1.19149141441062,1.82839852397255,4.7997726838022,3.44113921600755,1.14846392823004,0.86152399231815,2.37018355954478,5.32065574477847,1.76421090831952,1.10865255327652,0,0,0,3.46621943701529,2.49351968037739,2.6542016314108,0.418531630736908,0,0,0,0,0,5.16176953699867,5.27160042341476,4.9557623083654,10.9534788208725,4.14247797122848,8.78744730937887,9.13820525649132,8.39918529752175,7.18762821824858,0.503347818173209,2.90144856804538,1.68046899571232,1.80081605225163,1.14613375975503,4.64104883049698,1.82084814773638,3.1739458756322,2.53532561402472,7.45457970552091,13.3394219416671,2.2497492932035,2.96659908770092,2.8419204597844,8.38880309451533,12.2949857702897,0.829516898467821,1.89008313664367,0.841299845405528,5.14171771926846,6.18431914664518,0.734944795289724,0.766763768145891,1.83843757322004,23.1243350098716,13.7902325132003,11.5204899942183,1.31886287730194,4.11694396210843,1.04182674111352,20.9387249251036,13.5063026407603,11.3070703354839,5.30331453852602,2.70506193518296,3.35519002485541,0.832988126665025,1.88928900266964,5.79728977403356,2.58127163094416,3.39985666853875,7.01614149129162,3.89865850468601,5.82434953226536,3.5111105032938,2.38602451609281,2.59786004602869,1.41335829804136,2.11265129665021,0,0,0,2.81438353314578,4.30711771307668,2.52762222507392,2.8545969929765,2.33044095282455,3.56261133755579,1.04091196059682,2.13125834818499,1.38369298353635,1.95939432718409,2.11659672844269,2.38766523526383,0.741584903203122,3.18118585223806,0.884610551949874,0.970601099684455,0.220841518460394,0.484875253135222,5.59175283654366,7.02673912827713,6.91174132484402,1.27728527604296,0.239630249011841,1.19980546198682,0.508280908292259,13.3313669070292,17.3850229071078,1.25654352112864,16.8609590586508,12.5300574091862,14.7529511637288,10.8701646255398,0.916554274652847,2.36373244159177,3.79084137650512,1.05220927943237,1.69156575851515,1.83921683546778,1.98068342785884,2.26057226753573,1.49680298132921,2.43416068541215,1.96773621575431,3.62184719034622,0.215567992932842,0.567318240503458,2.46331573829528,1.09597866213787,1.94633074457919,2.089512999133,2.05782136407943,1.59227413454795,0,0.772043721344145,0.284163499395593,2.48550927042602,2.81431271977315,1.44049649168812,1.89395788468168,1.18058539048442,1.3884040159864,0.465067889500816,1.60964040839772,0.817357396570186,1.15191894939436,1.14917224855367,1.29710095273369,1.46199987425332,1.75640092232841,1.8788898626452,15.5614561937454,2.05809224758569,2.97376904685418,0.793351699990633,1.49301775374664,0.464473343720877,3.35055399437443,3.63030344322017,2.00140239460383,3.42406127002606,0.949058123089023,0.494096864172033,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,2.80979464837102,1.99141273254367,1.89667900953082,1.14248512609729,2.25415471346161,0.814605311381257,1.74557238450863,0.350679099451593,3.16182685621286,2.65698266363284,3.45397201251025,2.59134044235781,4.44678940630723,0.83422552858047,0.982794975566015,1.12431056192427,1.42002084971952,0.964708639009667,0.25462585178142,1.15078454980324,0.162135226775035,0.549122826376163,1.43768206527355,2.97712758134803,2.49630138491648,2.02063102357689,3.40855085691633,0.964887042726734,3.69506380333209,1.51593129416388,1.14075483509418,1.52770577197669,1.87752198630802,2.01007508930179,2.38043640886014,0.780534591431195,1.26108115284953,1.32878813789265,1.59454768657487,4.09658286789345,2.59027472798843,2.31438493730419,3.01582567878545,3.26343410291226,0.491764273019036,1.37968373152366,21.1926778783885,14.417037450841,0.655739781506702,1.00988370881749,2.83957397474631,2.73307121007647,2.36965737506079,4.06246956519338,2.22798674082394,1.98153571552183,4.04810701674894,3.79932615284705,1.58115111178609,5.78378369559253,4.9679029822894,1.95872164033981,0.325773918707152,2.8044920905331,3.98235415019888,2.6705869977048,3.32555912661226,4.14931175462976,0.590603785761546,1.53717573971964,1.29214146584111,1.45413491791002,2.49548164869305,2.21225730555071,0,3.09406629744561,13.9580238359053,1.8006109403131,3.62204314591713,4.07240366560025,3.72414490648775,3.56737635204141,3.62007845324666,1.8267896946876,0.704015124191131,1.69465656691056,2.20528398054962,1.31909002353184,0.645857706783622,0.603129249281559,0.596861720015682,0.984845398470368,0,20.3967832211561,1.02522528478712,1.03193433981611,1.11116716421827,0.376736914009382,0.410082683163076,0.457556346413045,0.849892149969277,1.11961161858926,0.829199842826543,3.81868247206045,1.42351197111511,2.84647253977588,2.26811215725783,3.13632444021703,4.36725127492355,2.02296519577231,1.98368293740806,2.6175594198403,1.03691978633434,2.4853572523477,0,1.19613236835183,1.65458490457098,2.52786544847262,1.54991788173277,4.05494701177868,1.76035857968631,2.47388331203505,2.51662426621706,1.44950472495604,0.864090018773596,1.89606672376907,2.8381530140623,2.2596410576262,1.42912905275575,0.895133478337407,1.19208812868759,0.721172697119813,0.590758108698309,0.605798699688886,0.533447646584999,1.10908803650525,0.779663045918019,0.577271049841977,1.05189211963412,0.906921534460845,2.21985953374065,1.07656627931371,1.17519231454855,8.88672132548076,3.19060208267009,4.76194223094889,2.14368379079066,2.50786052017682,13.5540442228096,10.5874804396651,12.6037012956667,7.73339320546594,17.8121455140367,17.3740596399631,22.9507650078814,23.8670237708837,28.0948293570207,21.7459330935764,1.14166082342594,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.551530525350042,1.33348036680969,1.23621034343337,0.320919209591815,1.26348605881899,1.77435509923168,0.943131706930381,2.24739617927718,1.60062881012173,0.861532034334199,0.952587382566147,0.811190281613988,1.15745532278223,1.23625770240992,0.883193520806384,2.74295401908332,1.77475806159337,1.66905332963125,1.30811774969096,1.03520318456864,1.18460451048347,0.548783918618318,1.8414879800649,1.22223702461276,2.24456908663095,1.06771516311757,0.886540341380071,1.22769312950907,0.929621047115796,1.92906610981141,1.24905288968973,2.10538447600868,0.214871054048298,0.382576664137687,1.76473135295612,2.08681052058379 | |phase1_expression=1.76163731815273,0.348975407639361,0,0.60492842261366,1.00179145989269,1.34303417529512,1.86890112476421,1.29123323441576,0.140788722151667,0,0.171217968225505,0.159544317990673,1.36960583944965,1.22388563386596,0.333109761815663,0.607425802169478,0,0.946386496074713,0.959801035240171,1.27316895539409,4.16712121740242,1.19149141441062,1.82839852397255,4.7997726838022,3.44113921600755,1.14846392823004,0.86152399231815,2.37018355954478,5.32065574477847,1.76421090831952,1.10865255327652,0,0,0,3.46621943701529,2.49351968037739,2.6542016314108,0.418531630736908,0,0,0,0,0,5.16176953699867,5.27160042341476,4.9557623083654,10.9534788208725,4.14247797122848,8.78744730937887,9.13820525649132,8.39918529752175,7.18762821824858,0.503347818173209,2.90144856804538,1.68046899571232,1.80081605225163,1.14613375975503,4.64104883049698,1.82084814773638,3.1739458756322,2.53532561402472,7.45457970552091,13.3394219416671,2.2497492932035,2.96659908770092,2.8419204597844,8.38880309451533,12.2949857702897,0.829516898467821,1.89008313664367,0.841299845405528,5.14171771926846,6.18431914664518,0.734944795289724,0.766763768145891,1.83843757322004,23.1243350098716,13.7902325132003,11.5204899942183,1.31886287730194,4.11694396210843,1.04182674111352,20.9387249251036,13.5063026407603,11.3070703354839,5.30331453852602,2.70506193518296,3.35519002485541,0.832988126665025,1.88928900266964,5.79728977403356,2.58127163094416,3.39985666853875,7.01614149129162,3.89865850468601,5.82434953226536,3.5111105032938,2.38602451609281,2.59786004602869,1.41335829804136,2.11265129665021,0,0,0,2.81438353314578,4.30711771307668,2.52762222507392,2.8545969929765,2.33044095282455,3.56261133755579,1.04091196059682,2.13125834818499,1.38369298353635,1.95939432718409,2.11659672844269,2.38766523526383,0.741584903203122,3.18118585223806,0.884610551949874,0.970601099684455,0.220841518460394,0.484875253135222,5.59175283654366,7.02673912827713,6.91174132484402,1.27728527604296,0.239630249011841,1.19980546198682,0.508280908292259,13.3313669070292,17.3850229071078,1.25654352112864,16.8609590586508,12.5300574091862,14.7529511637288,10.8701646255398,0.916554274652847,2.36373244159177,3.79084137650512,1.05220927943237,1.69156575851515,1.83921683546778,1.98068342785884,2.26057226753573,1.49680298132921,2.43416068541215,1.96773621575431,3.62184719034622,0.215567992932842,0.567318240503458,2.46331573829528,1.09597866213787,1.94633074457919,2.089512999133,2.05782136407943,1.59227413454795,0,0.772043721344145,0.284163499395593,2.48550927042602,2.81431271977315,1.44049649168812,1.89395788468168,1.18058539048442,1.3884040159864,0.465067889500816,1.60964040839772,0.817357396570186,1.15191894939436,1.14917224855367,1.29710095273369,1.46199987425332,1.75640092232841,1.8788898626452,15.5614561937454,2.05809224758569,2.97376904685418,0.793351699990633,1.49301775374664,0.464473343720877,3.35055399437443,3.63030344322017,2.00140239460383,3.42406127002606,0.949058123089023,0.494096864172033,0.754005626400808,1.1937388322469,1.75467678407208,0.898819408654221,2.80979464837102,1.99141273254367,1.89667900953082,1.14248512609729,2.25415471346161,0.814605311381257,1.74557238450863,0.350679099451593,3.16182685621286,2.65698266363284,3.45397201251025,2.59134044235781,4.44678940630723,0.83422552858047,0.982794975566015,1.12431056192427,1.42002084971952,0.964708639009667,0.25462585178142,1.15078454980324,0.162135226775035,0.549122826376163,1.43768206527355,2.97712758134803,2.49630138491648,2.02063102357689,3.40855085691633,0.964887042726734,3.69506380333209,1.51593129416388,1.14075483509418,1.52770577197669,1.87752198630802,2.01007508930179,2.38043640886014,0.780534591431195,1.26108115284953,1.32878813789265,1.59454768657487,4.09658286789345,2.59027472798843,2.31438493730419,3.01582567878545,3.26343410291226,0.491764273019036,1.37968373152366,21.1926778783885,14.417037450841,0.655739781506702,1.00988370881749,2.83957397474631,2.73307121007647,2.36965737506079,4.06246956519338,2.22798674082394,1.98153571552183,4.04810701674894,3.79932615284705,1.58115111178609,5.78378369559253,4.9679029822894,1.95872164033981,0.325773918707152,2.8044920905331,3.98235415019888,2.6705869977048,3.32555912661226,4.14931175462976,0.590603785761546,1.53717573971964,1.29214146584111,1.45413491791002,2.49548164869305,2.21225730555071,0,3.09406629744561,13.9580238359053,1.8006109403131,3.62204314591713,4.07240366560025,3.72414490648775,3.56737635204141,3.62007845324666,1.8267896946876,0.704015124191131,1.69465656691056,2.20528398054962,1.31909002353184,0.645857706783622,0.603129249281559,0.596861720015682,0.984845398470368,0,20.3967832211561,1.02522528478712,1.03193433981611,1.11116716421827,0.376736914009382,0.410082683163076,0.457556346413045,0.849892149969277,1.11961161858926,0.829199842826543,3.81868247206045,1.42351197111511,2.84647253977588,2.26811215725783,3.13632444021703,4.36725127492355,2.02296519577231,1.98368293740806,2.6175594198403,1.03691978633434,2.4853572523477,0,1.19613236835183,1.65458490457098,2.52786544847262,1.54991788173277,4.05494701177868,1.76035857968631,2.47388331203505,2.51662426621706,1.44950472495604,0.864090018773596,1.89606672376907,2.8381530140623,2.2596410576262,1.42912905275575,0.895133478337407,1.19208812868759,0.721172697119813,0.590758108698309,0.605798699688886,0.533447646584999,1.10908803650525,0.779663045918019,0.577271049841977,1.05189211963412,0.906921534460845,2.21985953374065,1.07656627931371,1.17519231454855,8.88672132548076,3.19060208267009,4.76194223094889,2.14368379079066,2.50786052017682,13.5540442228096,10.5874804396651,12.6037012956667,7.73339320546594,17.8121455140367,17.3740596399631,22.9507650078814,23.8670237708837,28.0948293570207,21.7459330935764,1.14166082342594,0.399024873401031,1.53660245178721,0.972426868273176,0.838452650511929,0.551530525350042,1.33348036680969,1.23621034343337,0.320919209591815,1.26348605881899,1.77435509923168,0.943131706930381,2.24739617927718,1.60062881012173,0.861532034334199,0.952587382566147,0.811190281613988,1.15745532278223,1.23625770240992,0.883193520806384,2.74295401908332,1.77475806159337,1.66905332963125,1.30811774969096,1.03520318456864,1.18460451048347,0.548783918618318,1.8414879800649,1.22223702461276,2.24456908663095,1.06771516311757,0.886540341380071,1.22769312950907,0.929621047115796,1.92906610981141,1.24905288968973,2.10538447600868,0.214871054048298,0.382576664137687,1.76473135295612,2.08681052058379 | ||
|short_description=p1@Tmem14a | |short_description=p1@Tmem14a | ||
}} | }} |
Latest revision as of 01:02, 27 September 2015
Short description: | p1@Tmem14a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem14a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 163bp_to_ENSMUST00000027064, ENSMUST00000165595_5end |
EntrezGene: | Tmem14a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.91e-21 | 73 |
nervous system | 7.63e-20 | 75 |
regional part of nervous system | 3.18e-16 | 54 |
neural tube | 4.98e-15 | 52 |
neural rod | 4.98e-15 | 52 |
future spinal cord | 4.98e-15 | 52 |
neural keel | 4.98e-15 | 52 |
neurectoderm | 1.57e-14 | 64 |
neural plate | 1.57e-14 | 64 |
presumptive neural plate | 1.57e-14 | 64 |
ectoderm-derived structure | 4.60e-14 | 95 |
ectoderm | 4.60e-14 | 95 |
presumptive ectoderm | 4.60e-14 | 95 |
brain | 4.53e-13 | 47 |
future brain | 4.53e-13 | 47 |
regional part of brain | 1.30e-12 | 46 |
anatomical conduit | 1.14e-10 | 122 |
ecto-epithelium | 1.23e-10 | 73 |
structure with developmental contribution from neural crest | 1.76e-10 | 92 |
tube | 2.90e-10 | 114 |
anterior neural tube | 1.21e-09 | 40 |
regional part of forebrain | 3.96e-09 | 39 |
forebrain | 3.96e-09 | 39 |
future forebrain | 3.96e-09 | 39 |
pre-chordal neural plate | 6.07e-09 | 49 |
gray matter | 5.16e-08 | 34 |
occipital lobe | 9.15e-08 | 10 |
visual cortex | 9.15e-08 | 10 |
neocortex | 9.15e-08 | 10 |