FFCP PHASE1:Mm9::chr11:118064018..118064064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19157 | |EntrezGene=19157 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-234bp_to_uc007mos.1_5end | |association_with_transcript=-234bp_to_uc007mos.1_5end | ||
|cluster_id=chr11:118064018..118064064,- | |||
|description=CAGE_peak_3_at_Cyth1_5end | |description=CAGE_peak_3_at_Cyth1_5end | ||
|id=chr11:118064018..118064064,- | |id=chr11:118064018..118064064,- | ||
|ontology_enrichment_celltype=CL:0000540!2.67e-16!33;CL:0000047!2.67e-16!33;CL:0000031!2.67e-16!33;CL:0000404!2.67e-16!33;CL:0000117!2.01e-12!23;CL:0000337!2.01e-12!23;CL:0000393!2.10e-11!39;CL:0000211!2.10e-11!39;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!1.73e-10!43;CL:0000055!6.53e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.67e-16!33;CL:0000047!2.67e-16!33;CL:0000031!2.67e-16!33;CL:0000404!2.67e-16!33;CL:0000117!2.01e-12!23;CL:0000337!2.01e-12!23;CL:0000393!2.10e-11!39;CL:0000211!2.10e-11!39;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!1.73e-10!43;CL:0000055!6.53e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.16e-17,33;CL:0000047,3.16e-17,33;CL:0000031,3.16e-17,33;CL:0000404,3.16e-17,33;CL:0000117,4.17e-13,23;CL:0000337,4.17e-13,23;CL:0000393,5.30e-12,39;CL:0000211,5.30e-12,39;CL:0000221,1.19e-10,44;CL:0000133,1.19e-10,44;CL:0002319,1.54e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.11e-30!73;UBERON:0005743!4.11e-30!73;UBERON:0000073!1.94e-28!75;UBERON:0001016!1.94e-28!75;UBERON:0004121!2.29e-26!102;UBERON:0000924!2.29e-26!102;UBERON:0006601!2.29e-26!102;UBERON:0002346!1.56e-24!71;UBERON:0003075!1.56e-24!71;UBERON:0007284!1.56e-24!71;UBERON:0000033!6.54e-24!63;UBERON:0001049!8.43e-23!52;UBERON:0005068!8.43e-23!52;UBERON:0006241!8.43e-23!52;UBERON:0007135!8.43e-23!52;UBERON:0000955!2.15e-22!50;UBERON:0006238!2.15e-22!50;UBERON:0002616!1.07e-21!49;UBERON:0003056!9.40e-21!49;UBERON:0003080!3.27e-19!40;UBERON:0002780!1.06e-18!39;UBERON:0001890!1.06e-18!39;UBERON:0006240!1.06e-18!39;UBERON:0002020!7.46e-17!34;UBERON:0007811!2.03e-16!86;UBERON:0000153!9.50e-16!94;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0000956!6.43e-11!21;UBERON:0001869!6.43e-11!21;UBERON:0000203!6.43e-11!21;UBERON:0002619!1.80e-08!17;UBERON:0002021!5.04e-08!10;UBERON:0000411!5.04e-08!10;UBERON:0001950!5.04e-08!10;UBERON:0000468!1.04e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!4.11e-30!73;UBERON:0005743!4.11e-30!73;UBERON:0000073!1.94e-28!75;UBERON:0001016!1.94e-28!75;UBERON:0004121!2.29e-26!102;UBERON:0000924!2.29e-26!102;UBERON:0006601!2.29e-26!102;UBERON:0002346!1.56e-24!71;UBERON:0003075!1.56e-24!71;UBERON:0007284!1.56e-24!71;UBERON:0000033!6.54e-24!63;UBERON:0001049!8.43e-23!52;UBERON:0005068!8.43e-23!52;UBERON:0006241!8.43e-23!52;UBERON:0007135!8.43e-23!52;UBERON:0000955!2.15e-22!50;UBERON:0006238!2.15e-22!50;UBERON:0002616!1.07e-21!49;UBERON:0003056!9.40e-21!49;UBERON:0003080!3.27e-19!40;UBERON:0002780!1.06e-18!39;UBERON:0001890!1.06e-18!39;UBERON:0006240!1.06e-18!39;UBERON:0002020!7.46e-17!34;UBERON:0007811!2.03e-16!86;UBERON:0000153!9.50e-16!94;UBERON:0002791!8.51e-15!29;UBERON:0003528!8.51e-15!29;UBERON:0001893!8.51e-15!29;UBERON:0000956!6.43e-11!21;UBERON:0001869!6.43e-11!21;UBERON:0000203!6.43e-11!21;UBERON:0002619!1.80e-08!17;UBERON:0002021!5.04e-08!10;UBERON:0000411!5.04e-08!10;UBERON:0001950!5.04e-08!10;UBERON:0000468!1.04e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-31,73;UBERON:0001016,1.99e-29,75;UBERON:0002346,4.43e-27,64;UBERON:0003075,4.43e-27,64;UBERON:0007284,4.43e-27,64;UBERON:0004121,8.04e-27,95;UBERON:0000924,8.04e-27,95;UBERON:0006601,8.04e-27,95;UBERON:0000073,8.05e-25,54;UBERON:0001049,1.44e-23,52;UBERON:0005068,1.44e-23,52;UBERON:0006241,1.44e-23,52;UBERON:0007135,1.44e-23,52;UBERON:0010371,3.56e-23,73;UBERON:0010314,3.94e-22,92;UBERON:0003056,5.72e-22,49;UBERON:0000955,2.03e-21,47;UBERON:0006238,2.03e-21,47;UBERON:0002616,1.08e-20,46;UBERON:0003080,2.49e-20,40;UBERON:0002780,8.69e-20,39;UBERON:0001890,8.69e-20,39;UBERON:0006240,8.69e-20,39;UBERON:0002020,8.02e-18,34;UBERON:0003528,1.23e-15,29;UBERON:0002791,1.23e-15,29;UBERON:0001893,1.23e-15,29;UBERON:0000956,1.63e-11,21;UBERON:0001869,1.63e-11,21;UBERON:0000203,1.63e-11,21;UBERON:0002619,6.51e-09,17;UBERON:0002021,1.97e-08,10;UBERON:0000411,1.97e-08,10;UBERON:0001950,1.97e-08,10 | |||
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| ||
|short_description=p3@Cyth1 | |short_description=p3@Cyth1 | ||
}} | }} |
Latest revision as of 01:32, 27 September 2015
Short description: | p3@Cyth1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cyth1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -234bp_to_uc007mos.1_5end |
EntrezGene: | Cyth1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.16e-17 | 33 |
neuronal stem cell | 3.16e-17 | 33 |
neuroblast | 3.16e-17 | 33 |
electrically signaling cell | 3.16e-17 | 33 |
CNS neuron (sensu Vertebrata) | 4.17e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.17e-13 | 23 |
electrically responsive cell | 5.30e-12 | 39 |
electrically active cell | 5.30e-12 | 39 |
ectodermal cell | 1.19e-10 | 44 |
neurectodermal cell | 1.19e-10 | 44 |
neural cell | 1.54e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.17e-31 | 73 |
nervous system | 1.99e-29 | 75 |
neurectoderm | 4.43e-27 | 64 |
neural plate | 4.43e-27 | 64 |
presumptive neural plate | 4.43e-27 | 64 |
ectoderm-derived structure | 8.04e-27 | 95 |
ectoderm | 8.04e-27 | 95 |
presumptive ectoderm | 8.04e-27 | 95 |
regional part of nervous system | 8.05e-25 | 54 |
neural tube | 1.44e-23 | 52 |
neural rod | 1.44e-23 | 52 |
future spinal cord | 1.44e-23 | 52 |
neural keel | 1.44e-23 | 52 |
ecto-epithelium | 3.56e-23 | 73 |
structure with developmental contribution from neural crest | 3.94e-22 | 92 |
pre-chordal neural plate | 5.72e-22 | 49 |
brain | 2.03e-21 | 47 |
future brain | 2.03e-21 | 47 |
regional part of brain | 1.08e-20 | 46 |
anterior neural tube | 2.49e-20 | 40 |
regional part of forebrain | 8.69e-20 | 39 |
forebrain | 8.69e-20 | 39 |
future forebrain | 8.69e-20 | 39 |
gray matter | 8.02e-18 | 34 |
brain grey matter | 1.23e-15 | 29 |
regional part of telencephalon | 1.23e-15 | 29 |
telencephalon | 1.23e-15 | 29 |
cerebral cortex | 1.63e-11 | 21 |
cerebral hemisphere | 1.63e-11 | 21 |
pallium | 1.63e-11 | 21 |
regional part of cerebral cortex | 6.51e-09 | 17 |
occipital lobe | 1.97e-08 | 10 |
visual cortex | 1.97e-08 | 10 |
neocortex | 1.97e-08 | 10 |