FFCP PHASE1:Mm9::chr1:34529610..34529617,+: Difference between revisions
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{{FFCP|EntrezGene=19253|HGNC=|MCL_coexpression_id=1877|UniProt=|association_with_transcript=29bp_to_uc007aot.1_5end|description=CAGE_peak_4_at_Ptpn18_5end|id=chr1:34529610..34529617,+|ontology_enrichment_celltype=CL:0000988!1.56e-12!32;CL:0002032!1.56e-12!32;CL:0000037!1.56e-12!32;CL:0000566!1.56e-12!32;CL:0000837!1.56e-12!32;CL:0002031!1.00e-09!25;CL:0000738!8.30e-09!17;CL:0002087!8.30e-09!17;CL:0000838!9.07e-08!12;CL:0000049!2.90e-07!19;CL:0000084!3.41e-07!11;CL:0000827!3.41e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,3.23e-26,32;CL:0002032,3.23e-26,32;CL:0000037,3.23e-26,32;CL:0000837,3.23e-26,32;CL:0002320,1.91e-20,46;CL:0000134,1.91e-20,46;CL:0002031,8.02e-20,25;CL:0000738,2.87e-16,17;CL:0002087,2.87e-16,17;CL:0000219,7.27e-16,54;CL:0000049,4.18e-15,19;CL:0000838,2.96e-13,12;CL:0000084,3.55e-12,11;CL:0000827,3.55e-12,11;CL:0000542,5.86e-12,13;CL:0000051,5.86e-12,13;CL:0000763,1.41e-11,16;CL:0000791,3.52e-10,9;CL:0000789,3.52e-10,9;CL:0002420,3.52e-10,9;CL:0002419,3.52e-10,9;CL:0000790,3.52e-10,9;CL:0000557,1.65e-09,7;CL:0000624,2.24e-09,8;CL:0000034,2.80e-09,97;CL:0000839,3.33e-08,13;CL:0000723,3.63e-08,91;CL:0000048,3.63e-08,91;CL:0000553,3.22e-07,6;CL:0000556,3.22e-07,6;CL:0000893,5.58e-07,6;CL:0002489,5.58e-07,6;CL:0000898,5.58e-07,6;CL:0000809,5.58e-07,6;CL:0000810,5.58e-07,6;CL:0000895,5.58e-07,6;CL:0000808,5.58e-07,6;CL:0000894,5.58e-07,6;CL:0000806,5.58e-07,6;CL:0000807,5.58e-07,6;CL:0000805,5.58e-07,6;CL:0002425,5.58e-07,6;CL:0002436,5.58e-07,6;CL:0002427,5.58e-07,6;CL:0002428,5.58e-07,6;CL:0002429,5.58e-07,6;CL:0002433,5.58e-07,6;CL:0002431,5.58e-07,6;CL:0002432,5.58e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.19e-21!48;UBERON:0002390!8.54e-20!45;UBERON:0003061!8.54e-20!45;UBERON:0002405!9.54e-15!70;UBERON:0002371!6.29e-11!16;UBERON:0003081!9.89e-11!88;UBERON:0001474!2.38e-10!22;UBERON:0004765!2.38e-10!22;UBERON:0001434!2.38e-10!22;UBERON:0004177!4.33e-10!29;UBERON:0003408!9.13e-08!24;UBERON:0002370!1.02e-07!23;UBERON:0000974!1.02e-07!23;UBERON:0004807!1.02e-07!23;UBERON:0005058!1.02e-07!23;UBERON:0003351!1.02e-07!23;UBERON:0009113!1.02e-07!23;UBERON:0003295!1.02e-07!23;UBERON:0009722!1.02e-07!23;UBERON:0005562!1.02e-07!23;UBERON:0007690!1.02e-07!23;UBERON:0006562!2.52e-07!24;UBERON:0001557!2.52e-07!24;UBERON:0001042!2.52e-07!24;UBERON:0008814!2.52e-07!24;UBERON:0009145!2.52e-07!24;UBERON:0001004!4.40e-07!42;UBERON:0000065!5.50e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.53e-38,48;UBERON:0002405,1.53e-38,48;UBERON:0002390,1.61e-37,45;UBERON:0003061,1.61e-37,45;UBERON:0002384,1.91e-20,46;UBERON:0003081,1.43e-19,87;UBERON:0002371,3.37e-19,16;UBERON:0004177,6.39e-19,29;UBERON:0005057,6.39e-19,29;UBERON:0001474,1.39e-17,22;UBERON:0004765,1.39e-17,22;UBERON:0001434,1.39e-17,22;UBERON:0002204,1.93e-14,32;UBERON:0002370,2.12e-14,23;UBERON:0000974,2.12e-14,23;UBERON:0004807,2.12e-14,23;UBERON:0005058,2.12e-14,23;UBERON:0003351,2.12e-14,23;UBERON:0009113,2.12e-14,23;UBERON:0003295,2.12e-14,23;UBERON:0009722,2.12e-14,23;UBERON:0005562,2.12e-14,23;UBERON:0007690,2.12e-14,23;UBERON:0000077,2.40e-14,35;UBERON:0006562,1.48e-13,24;UBERON:0003408,1.48e-13,24;UBERON:0001557,1.48e-13,24;UBERON:0001042,1.48e-13,24;UBERON:0008814,1.48e-13,24;UBERON:0009145,1.48e-13,24;UBERON:0000926,7.89e-13,120;UBERON:0004120,7.89e-13,120;UBERON:0006603,7.89e-13,120;UBERON:0000072,2.07e-11,27;UBERON:0000065,1.13e-09,41;UBERON:0001004,2.77e-09,42;UBERON:0007811,3.24e-07,36|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,8.13476937681931,2.25261955442667,2.80877431586392,2.56826952338257,2.31339261086476,5.13602189793617,6.20684857174882,1.66554880907831,2.22722794128809,1.39912375625629,7.25562980323947,9.32378148519024,10.6097412949508,0.340173160604279,5.75887516965135,3.39559725880616,0.799962113967033,2.52350209173887,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0.166234645358492,0,2.92972141515835,7.0320181007142,2.61761871986899,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,5.36904339384756,8.70434570413613,2.35265659399725,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,16.1981949110652,17.7995945262055,28.419204597844,5.99200221036809,6.14749288514487,0.103689612308478,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0.287536413054709,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.854230084794618,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,4.66088190564909,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.376999773989026,0.247194967734374,1.15679485535929,2.65383165584962,0.323533699894818,1.32504911076236,1.93950101254089,0,0,0,0.255457055208591,6.4700167233197,22.1964010467561,9.14905634926066,0.149790639404823,0.457500602818626,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0,0.305518091550949,1.24406970610093,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,1.23469281844766,0.398068533636986,14.7464769335779,9.52187256324446,6.81992398549422,0.621377317606506,0.703578179943289,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.658650345873152,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,1.00107063429656,0.393117990226406,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,1.15078454980324,0.810676133875177,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,1.29327233116623,0.757965647081939,1.30371981153621,1.01847051465113,1.17345124144251,0.837531287209079,0.476087281772027,0.195133647857799,0.630540576424764,0.221464689648775,0.637819074629948,0.983179888294428,1.20879487306127,0.433947175744535,3.01582567878545,7.61467957346193,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.712262414669021,0.162886959353576,0.329940245945071,0,0.242780636154981,1.209294227859,0.188605079755898,0,0.307435147943927,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0.18006109403131,0.646793418913773,1.71469628025274,0.532020700926821,0.356737635204141,0.822745103010605,0,0,0.21183207086382,0.441056796109924,0.65954501176592,1.13025098687134,0.361877549568935,0.119372344003136,0.656563598980245,0.582961673259701,0.370850604021019,4.27177201994632,1.44470807574256,2.22233432843654,1.13021074202815,1.77702496037333,2.0590035588587,4.9293744698218,4.61839792668071,4.83699908315483,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.674321731924103,0.743881101528023,0.785267825952089,0.129614973291793,0.621339313086926,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0,0.288030006257865,6.00421129193539,2.02725215290164,2.15693010046137,1.55904987573354,2.14832034800978,0.993406773906324,3.24527713703916,4.13530676088816,3.73575864808146,3.73413352609499,4.43635214602098,4.19068887180935,4.52195655709548,4.20756847853648,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0.920650473014354,0,0.343706364687375,0,1.5107877947794,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,1.2869045591501,0.888986911206461,0.618105171716683,0.962757628775446,0,1.01391719956096,0.377252682772152,0.187283014939765,0.512201219238954,0.402048282689293,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0.135804113845862,1.12228454331548,0.237270036248348,0.689531376628944,0.818462086339379,0.154936841185966,0.192906610981141,0,0.935726433781634,0.859484216193193,0.382576664137687,0.661774257358546,0.927471342481686|short_description=p4@Ptpn18}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19253 | |||
|HGNC= | |||
|MCL_coexpression_id=1877 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=29bp_to_uc007aot.1_5end | |||
|cluster_id=chr1:34529610..34529617,+ | |||
|description=CAGE_peak_4_at_Ptpn18_5end | |||
|id=chr1:34529610..34529617,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.56e-12!32;CL:0002032!1.56e-12!32;CL:0000037!1.56e-12!32;CL:0000566!1.56e-12!32;CL:0000837!1.56e-12!32;CL:0002031!1.00e-09!25;CL:0000738!8.30e-09!17;CL:0002087!8.30e-09!17;CL:0000838!9.07e-08!12;CL:0000049!2.90e-07!19;CL:0000084!3.41e-07!11;CL:0000827!3.41e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.23e-26,32;CL:0002032,3.23e-26,32;CL:0000037,3.23e-26,32;CL:0000837,3.23e-26,32;CL:0002320,1.91e-20,46;CL:0000134,1.91e-20,46;CL:0002031,8.02e-20,25;CL:0000738,2.87e-16,17;CL:0002087,2.87e-16,17;CL:0000219,7.27e-16,54;CL:0000049,4.18e-15,19;CL:0000838,2.96e-13,12;CL:0000084,3.55e-12,11;CL:0000827,3.55e-12,11;CL:0000542,5.86e-12,13;CL:0000051,5.86e-12,13;CL:0000763,1.41e-11,16;CL:0000791,3.52e-10,9;CL:0000789,3.52e-10,9;CL:0002420,3.52e-10,9;CL:0002419,3.52e-10,9;CL:0000790,3.52e-10,9;CL:0000557,1.65e-09,7;CL:0000624,2.24e-09,8;CL:0000034,2.80e-09,97;CL:0000839,3.33e-08,13;CL:0000723,3.63e-08,91;CL:0000048,3.63e-08,91;CL:0000553,3.22e-07,6;CL:0000556,3.22e-07,6;CL:0000893,5.58e-07,6;CL:0002489,5.58e-07,6;CL:0000898,5.58e-07,6;CL:0000809,5.58e-07,6;CL:0000810,5.58e-07,6;CL:0000895,5.58e-07,6;CL:0000808,5.58e-07,6;CL:0000894,5.58e-07,6;CL:0000806,5.58e-07,6;CL:0000807,5.58e-07,6;CL:0000805,5.58e-07,6;CL:0002425,5.58e-07,6;CL:0002436,5.58e-07,6;CL:0002427,5.58e-07,6;CL:0002428,5.58e-07,6;CL:0002429,5.58e-07,6;CL:0002433,5.58e-07,6;CL:0002431,5.58e-07,6;CL:0002432,5.58e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.19e-21!48;UBERON:0002390!8.54e-20!45;UBERON:0003061!8.54e-20!45;UBERON:0002405!9.54e-15!70;UBERON:0002371!6.29e-11!16;UBERON:0003081!9.89e-11!88;UBERON:0001474!2.38e-10!22;UBERON:0004765!2.38e-10!22;UBERON:0001434!2.38e-10!22;UBERON:0004177!4.33e-10!29;UBERON:0003408!9.13e-08!24;UBERON:0002370!1.02e-07!23;UBERON:0000974!1.02e-07!23;UBERON:0004807!1.02e-07!23;UBERON:0005058!1.02e-07!23;UBERON:0003351!1.02e-07!23;UBERON:0009113!1.02e-07!23;UBERON:0003295!1.02e-07!23;UBERON:0009722!1.02e-07!23;UBERON:0005562!1.02e-07!23;UBERON:0007690!1.02e-07!23;UBERON:0006562!2.52e-07!24;UBERON:0001557!2.52e-07!24;UBERON:0001042!2.52e-07!24;UBERON:0008814!2.52e-07!24;UBERON:0009145!2.52e-07!24;UBERON:0001004!4.40e-07!42;UBERON:0000065!5.50e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.53e-38,48;UBERON:0002405,1.53e-38,48;UBERON:0002390,1.61e-37,45;UBERON:0003061,1.61e-37,45;UBERON:0002384,1.91e-20,46;UBERON:0003081,1.43e-19,87;UBERON:0002371,3.37e-19,16;UBERON:0004177,6.39e-19,29;UBERON:0005057,6.39e-19,29;UBERON:0001474,1.39e-17,22;UBERON:0004765,1.39e-17,22;UBERON:0001434,1.39e-17,22;UBERON:0002204,1.93e-14,32;UBERON:0002370,2.12e-14,23;UBERON:0000974,2.12e-14,23;UBERON:0004807,2.12e-14,23;UBERON:0005058,2.12e-14,23;UBERON:0003351,2.12e-14,23;UBERON:0009113,2.12e-14,23;UBERON:0003295,2.12e-14,23;UBERON:0009722,2.12e-14,23;UBERON:0005562,2.12e-14,23;UBERON:0007690,2.12e-14,23;UBERON:0000077,2.40e-14,35;UBERON:0006562,1.48e-13,24;UBERON:0003408,1.48e-13,24;UBERON:0001557,1.48e-13,24;UBERON:0001042,1.48e-13,24;UBERON:0008814,1.48e-13,24;UBERON:0009145,1.48e-13,24;UBERON:0000926,7.89e-13,120;UBERON:0004120,7.89e-13,120;UBERON:0006603,7.89e-13,120;UBERON:0000072,2.07e-11,27;UBERON:0000065,1.13e-09,41;UBERON:0001004,2.77e-09,42;UBERON:0007811,3.24e-07,36 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0,8.13476937681931,2.25261955442667,2.80877431586392,2.56826952338257,2.31339261086476,5.13602189793617,6.20684857174882,1.66554880907831,2.22722794128809,1.39912375625629,7.25562980323947,9.32378148519024,10.6097412949508,0.340173160604279,5.75887516965135,3.39559725880616,0.799962113967033,2.52350209173887,0,0,0.215471232685889,0,0,0.665191531965914,0,0,0,0,0.166234645358492,0,2.92972141515835,7.0320181007142,2.61761871986899,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,5.36904339384756,8.70434570413613,2.35265659399725,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,16.1981949110652,17.7995945262055,28.419204597844,5.99200221036809,6.14749288514487,0.103689612308478,0,0.210324961351382,0.571301968807607,0.220868540951614,0,0.287536413054709,0,1.10115880999389,0.127687338085188,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.30559649555362,0.589257170947335,0.854230084794618,0.745597783301202,0,0,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,4.66088190564909,0,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.352766121407114,0.376999773989026,0.247194967734374,1.15679485535929,2.65383165584962,0.323533699894818,1.32504911076236,1.93950101254089,0,0,0,0.255457055208591,6.4700167233197,22.1964010467561,9.14905634926066,0.149790639404823,0.457500602818626,0.251308704225729,0.173824320192276,0.511430914660661,0.41557608911912,0,0.305518091550949,1.24406970610093,0.252722758433675,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.136072998302656,0.384341160854549,0.0937017245597288,0,0.215567992932842,0.378212160335639,0,0.43839146485515,0.278047249225598,0.348252166522167,1.23469281844766,0.398068533636986,14.7464769335779,9.52187256324446,6.81992398549422,0.621377317606506,0.703578179943289,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.438599962275997,0.658650345873152,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0.232236671860439,0.38660238396628,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.864552199498777,0.398282546508734,0.189667900953082,0,0,0.610953983535943,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,1.00107063429656,0.393117990226406,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,1.15078454980324,0.810676133875177,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.538192240565737,0.482443521363367,1.29327233116623,0.757965647081939,1.30371981153621,1.01847051465113,1.17345124144251,0.837531287209079,0.476087281772027,0.195133647857799,0.630540576424764,0.221464689648775,0.637819074629948,0.983179888294428,1.20879487306127,0.433947175744535,3.01582567878545,7.61467957346193,0,0.551873492609465,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0.642642632843614,0.283880170416537,0.712262414669021,0.162886959353576,0.329940245945071,0,0.242780636154981,1.209294227859,0.188605079755898,0,0.307435147943927,1.03371317267288,0.727067458955011,0.712994756769443,0.632073515871632,0,2.06271086496374,0,0.18006109403131,0.646793418913773,1.71469628025274,0.532020700926821,0.356737635204141,0.822745103010605,0,0,0.21183207086382,0.441056796109924,0.65954501176592,1.13025098687134,0.361877549568935,0.119372344003136,0.656563598980245,0.582961673259701,0.370850604021019,4.27177201994632,1.44470807574256,2.22233432843654,1.13021074202815,1.77702496037333,2.0590035588587,4.9293744698218,4.61839792668071,4.83699908315483,0,0,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.674321731924103,0.743881101528023,0.785267825952089,0.129614973291793,0.621339313086926,0.56369293868419,0.448549638131936,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0,0.288030006257865,6.00421129193539,2.02725215290164,2.15693010046137,1.55904987573354,2.14832034800978,0.993406773906324,3.24527713703916,4.13530676088816,3.73575864808146,3.73413352609499,4.43635214602098,4.19068887180935,4.52195655709548,4.20756847853648,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0,0.920650473014354,0,0.343706364687375,0,1.5107877947794,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,1.2869045591501,0.888986911206461,0.618105171716683,0.962757628775446,0,1.01391719956096,0.377252682772152,0.187283014939765,0.512201219238954,0.402048282689293,0.476293691283074,1.15884325944855,0.578727661391115,0.824171801606613,0,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0.182927972872773,0.789209134313529,0.135804113845862,1.12228454331548,0.237270036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| |||
|short_description=p4@Ptpn18 | |||
}} |
Latest revision as of 02:00, 27 September 2015
Short description: | p4@Ptpn18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ptpn18_5end |
Coexpression cluster: | MCL_coexpression_mm9:1877 |
Association with transcript: | 29bp_to_uc007aot.1_5end |
EntrezGene: | Ptpn18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data