FFCP PHASE1:Mm9::chr11:119878372..119878474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=11302|HGNC=|MCL_coexpression_id=20|UniProt=B1AZF9|association_with_transcript=0bp_to_ENSMUST00000132575,uc007mrk.1_5end|description=CAGE_peak_1_at_Aatk_5end|id=chr11:119878372..119878474,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.95e-18!102;UBERON:0000924!1.95e-18!102;UBERON:0006601!1.95e-18!102;UBERON:0000073!1.04e-14!75;UBERON:0001016!1.04e-14!75;UBERON:0001017!1.43e-13!73;UBERON:0005743!1.43e-13!73;UBERON:0002346!2.86e-11!71;UBERON:0003075!2.86e-11!71;UBERON:0007284!2.86e-11!71;UBERON:0000033!1.91e-10!63;UBERON:0001049!2.48e-10!52;UBERON:0005068!2.48e-10!52;UBERON:0006241!2.48e-10!52;UBERON:0007135!2.48e-10!52;UBERON:0000955!1.64e-09!50;UBERON:0006238!1.64e-09!50;UBERON:0002616!5.23e-09!49;UBERON:0003076!3.59e-07!12;UBERON:0003057!3.59e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.97e-18,95;UBERON:0000924,1.97e-18,95;UBERON:0006601,1.97e-18,95;UBERON:0001016,5.36e-17,75;UBERON:0001017,1.48e-15,73;UBERON:0000073,1.63e-13,54;UBERON:0010371,5.66e-13,73;UBERON:0001049,3.52e-12,52;UBERON:0005068,3.52e-12,52;UBERON:0006241,3.52e-12,52;UBERON:0007135,3.52e-12,52;UBERON:0002346,2.02e-10,64;UBERON:0003075,2.02e-10,64;UBERON:0007284,2.02e-10,64;UBERON:0000955,3.65e-09,47;UBERON:0006238,3.65e-09,47;UBERON:0010314,4.40e-09,92;UBERON:0002616,1.46e-08,46;UBERON:0002021,2.00e-08,10;UBERON:0000411,2.00e-08,10;UBERON:0001950,2.00e-08,10;UBERON:0002020,1.25e-07,34;UBERON:0003076,2.09e-07,12;UBERON:0003057,2.09e-07,12;UBERON:0003080,7.91e-07,40|phase1_expression=25.623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,19.7736072942147,21.5162250980071,0,0,0,40.2767888009363,32.9094126017904,0,0,0,13.2139057199266,48.265813796201,38.4016333140609,0,0.0914876436024097,0,61.9786257783066,32.0774687718058,27.6564828476026,11.7851434189467,10.2507610175354,1.86399445825301,21.6576912932906,30.304195602821,0,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,102.393166177647,0,0,0,0,0,0,1.1418387971906,0,0.890652834388949,1.21439728736295,3.04465478312141,2.99800146432876,3.61734337326294,3.41007250693544,0.628332956648377,0,1.3013942122792,0,2.58826959915855,0.662524555381181,0.484875253135222,1.86391761218122,17.8596286177044,31.8358994356452,0.510914110417183,0,0,0,49.2811203641867,53.5275705297793,0.125654352112864,16.5133104182663,19.4343747571051,60.8818970559511,65.2209877532386,0.305518091550949,0.373220911830279,0,2.31486041475121,0,0.229902104433473,0,0.150704817835715,0.748401490664606,1.15302348256365,1.21812241927647,11.3829483125167,0,0,0.175951124163949,0.43839146485515,0.556094498451196,1.0447564995665,2.46938563689532,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0,0.658239399653922,0.32833492815819,0.486412857275134,1.75439984910399,0.878200461164203,1.07365135008297,31.333202336055,0.308713837137853,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,1.75467678407208,1.79763881730844,0,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.335012514883631,1.42826184531608,0,0.157635144106191,0.221464689648775,1.43509291791738,0.983179888294428,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,94.4037469128217,125.416504653657,0,3.7870639080656,0,0,0.430846795465598,10.0366895140072,33.1970024382767,27.7415000173056,1.21443210502468,0.876767573733936,1.58115111178609,21.5285282002611,0.141940085208269,0.712262414669021,1.14020871547503,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,1.77181135728464,2.15204603560749,0.775284879504663,1.81766864738753,1.06949213515416,1.26414703174326,0,0,0,0,0.258717367565509,0.643011105094777,1.06404140185364,1.78368817602071,5.26556865926787,7.30715877875038,0,0,1.7642271844397,2.14352128823924,2.26050197374268,1.74907482291652,2.86493625607528,1.47726809770555,0.874442509889552,111.440606508316,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0.87345025498471,1.21377911746339,2.97552440611209,2.09404753587224,0.518459893167171,0,0,0,0,0,0,0.506868376472335,0,0.39061315453185,0.104859344425711,0,0,0,0.608175645870493,0.513554785824136,0,0.179026695667481,0,0.600977247599844,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0,0,2.49403421976732,0,0,0,1.73870634628971,0,0,0.643105137237198,0,11.8597886949584,11.9684561491866,17.7597609166213,8.76451229952807,15.0718154349541,11.3309084608455,16.2005400055633,7.65546045481175,10.4222754066367,8.80192529978094,0,0,0.512200817262403,1.21553358534147,0.419226325255965,1.10306105070008,2.44471400581777,1.23621034343337,1.92551525755089,1.01078884705519,2.28131369901216,0.754505365544305,1.68554713445788,2.30490548657529,2.06767688240208,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,1.47198920134397,1.02860775715625,0.70990322463735,2.38436189947321,1.30811774969096,1.69396884747595,1.69229215783353,0.73171189149109,1.57841826862706,2.03706170768793,1.12228454331548,1.89816028998679,2.1670986122624,1.22769312950907,0.77468420592983,1.35034627686799,4.74640098082097,2.33931608445408,3.22306581072447,8.7992632751668,8.16188250742207,6.4922993973718|short_description=p1@Aatk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11302 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=B1AZF9 | |||
|association_with_transcript=0bp_to_ENSMUST00000132575,uc007mrk.1_5end | |||
|cluster_id=chr11:119878372..119878474,- | |||
|description=CAGE_peak_1_at_Aatk_5end | |||
|id=chr11:119878372..119878474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.95e-18!102;UBERON:0000924!1.95e-18!102;UBERON:0006601!1.95e-18!102;UBERON:0000073!1.04e-14!75;UBERON:0001016!1.04e-14!75;UBERON:0001017!1.43e-13!73;UBERON:0005743!1.43e-13!73;UBERON:0002346!2.86e-11!71;UBERON:0003075!2.86e-11!71;UBERON:0007284!2.86e-11!71;UBERON:0000033!1.91e-10!63;UBERON:0001049!2.48e-10!52;UBERON:0005068!2.48e-10!52;UBERON:0006241!2.48e-10!52;UBERON:0007135!2.48e-10!52;UBERON:0000955!1.64e-09!50;UBERON:0006238!1.64e-09!50;UBERON:0002616!5.23e-09!49;UBERON:0003076!3.59e-07!12;UBERON:0003057!3.59e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.97e-18,95;UBERON:0000924,1.97e-18,95;UBERON:0006601,1.97e-18,95;UBERON:0001016,5.36e-17,75;UBERON:0001017,1.48e-15,73;UBERON:0000073,1.63e-13,54;UBERON:0010371,5.66e-13,73;UBERON:0001049,3.52e-12,52;UBERON:0005068,3.52e-12,52;UBERON:0006241,3.52e-12,52;UBERON:0007135,3.52e-12,52;UBERON:0002346,2.02e-10,64;UBERON:0003075,2.02e-10,64;UBERON:0007284,2.02e-10,64;UBERON:0000955,3.65e-09,47;UBERON:0006238,3.65e-09,47;UBERON:0010314,4.40e-09,92;UBERON:0002616,1.46e-08,46;UBERON:0002021,2.00e-08,10;UBERON:0000411,2.00e-08,10;UBERON:0001950,2.00e-08,10;UBERON:0002020,1.25e-07,34;UBERON:0003076,2.09e-07,12;UBERON:0003057,2.09e-07,12;UBERON:0003080,7.91e-07,40 | |||
|phase1_expression=25.623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,19.7736072942147,21.5162250980071,0,0,0,40.2767888009363,32.9094126017904,0,0,0,13.2139057199266,48.265813796201,38.4016333140609,0,0.0914876436024097,0,61.9786257783066,32.0774687718058,27.6564828476026,11.7851434189467,10.2507610175354,1.86399445825301,21.6576912932906,30.304195602821,0,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,102.393166177647,0,0,0,0,0,0,1.1418387971906,0,0.890652834388949,1.21439728736295,3.04465478312141,2.99800146432876,3.61734337326294,3.41007250693544,0.628332956648377,0,1.3013942122792,0,2.58826959915855,0.662524555381181,0.484875253135222,1.86391761218122,17.8596286177044,31.8358994356452,0.510914110417183,0,0,0,49.2811203641867,53.5275705297793,0.125654352112864,16.5133104182663,19.4343747571051,60.8818970559511,65.2209877532386,0.305518091550949,0.373220911830279,0,2.31486041475121,0,0.229902104433473,0,0.150704817835715,0.748401490664606,1.15302348256365,1.21812241927647,11.3829483125167,0,0,0.175951124163949,0.43839146485515,0.556094498451196,1.0447564995665,2.46938563689532,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.804820204198858,0,0.658239399653922,0.32833492815819,0.486412857275134,1.75439984910399,0.878200461164203,1.07365135008297,31.333202336055,0.308713837137853,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,1.75467678407208,1.79763881730844,0,0.796565093017469,0.189667900953082,1.14248512609729,1.1270773567308,0,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0.335012514883631,1.42826184531608,0,0.157635144106191,0.221464689648775,1.43509291791738,0.983179888294428,0.690739927463582,0.433947175744535,0,0,0.491764273019036,0,94.4037469128217,125.416504653657,0,3.7870639080656,0,0,0.430846795465598,10.0366895140072,33.1970024382767,27.7415000173056,1.21443210502468,0.876767573733936,1.58115111178609,21.5285282002611,0.141940085208269,0.712262414669021,1.14020871547503,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,1.77181135728464,2.15204603560749,0.775284879504663,1.81766864738753,1.06949213515416,1.26414703174326,0,0,0,0,0.258717367565509,0.643011105094777,1.06404140185364,1.78368817602071,5.26556865926787,7.30715877875038,0,0,1.7642271844397,2.14352128823924,2.26050197374268,1.74907482291652,2.86493625607528,1.47726809770555,0.874442509889552,111.440606508316,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.418176592028937,0.87345025498471,1.21377911746339,2.97552440611209,2.09404753587224,0.518459893167171,0,0,0,0,0,0,0.506868376472335,0,0.39061315453185,0.104859344425711,0,0,0,0.608175645870493,0.513554785824136,0,0.179026695667481,0,0.600977247599844,0,0.100966449948148,0.228620419965,0.201652370273681,0.0974578807397524,0,0,2.49403421976732,0,0,0,1.73870634628971,0,0,0.643105137237198,0,11.8597886949584,11.9684561491866,17.7597609166213,8.76451229952807,15.0718154349541,11.3309084608455,16.2005400055633,7.65546045481175,10.4222754066367,8.80192529978094,0,0,0.512200817262403,1.21553358534147,0.419226325255965,1.10306105070008,2.44471400581777,1.23621034343337,1.92551525755089,1.01078884705519,2.28131369901216,0.754505365544305,1.68554713445788,2.30490548657529,2.06767688240208,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,1.47198920134397,1.02860775715625,0.70990322463735,2.38436189947321,1.30811774969096,1.69396884747595,1.69229215783353,0.73171189149109,1.57841826862706,2.03706170768793,1.12228454331548,1.89816028998679,2.1670986122624,1.22769312950907,0.77468420592983,1.35034627686799,4.74640098082097,2.33931608445408,3.22306581072447,8.7992632751668,8.16188250742207,6.4922993973718 | |||
|short_description=p1@Aatk | |||
}} |
Latest revision as of 02:36, 27 September 2015
Short description: | p1@Aatk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aatk_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000132575, uc007mrk.1_5end |
EntrezGene: | Aatk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.97e-18 | 95 |
ectoderm | 1.97e-18 | 95 |
presumptive ectoderm | 1.97e-18 | 95 |
nervous system | 5.36e-17 | 75 |
central nervous system | 1.48e-15 | 73 |
regional part of nervous system | 1.63e-13 | 54 |
ecto-epithelium | 5.66e-13 | 73 |
neural tube | 3.52e-12 | 52 |
neural rod | 3.52e-12 | 52 |
future spinal cord | 3.52e-12 | 52 |
neural keel | 3.52e-12 | 52 |
neurectoderm | 2.02e-10 | 64 |
neural plate | 2.02e-10 | 64 |
presumptive neural plate | 2.02e-10 | 64 |
brain | 3.65e-09 | 47 |
future brain | 3.65e-09 | 47 |
structure with developmental contribution from neural crest | 4.40e-09 | 92 |
regional part of brain | 1.46e-08 | 46 |
occipital lobe | 2.00e-08 | 10 |
visual cortex | 2.00e-08 | 10 |
neocortex | 2.00e-08 | 10 |
gray matter | 1.25e-07 | 34 |
posterior neural tube | 2.09e-07 | 12 |
chordal neural plate | 2.09e-07 | 12 |
anterior neural tube | 7.91e-07 | 40 |