FFCP PHASE1:Mm9::chr18:24867755..24867790,+: Difference between revisions
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{{FFCP|EntrezGene=225288|HGNC=|MCL_coexpression_id=2|UniProt=Q76LL6,F8WHD7,E9Q1S4|association_with_transcript=-155bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end|description=CAGE_peak_5_at_Fhod3_5end|id=chr18:24867755..24867790,+|ontology_enrichment_celltype=CL:0000117!1.31e-17!23;CL:0000337!1.31e-17!23;CL:0000540!5.94e-13!33;CL:0000047!5.94e-13!33;CL:0000031!5.94e-13!33;CL:0000404!5.94e-13!33;CL:0000393!1.39e-09!39;CL:0000211!1.39e-09!39;CL:0000221!9.30e-09!44;CL:0000133!9.30e-09!44;CL:0002319!1.68e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,6.54e-27,23;CL:0000337,6.54e-27,23;CL:0000540,1.36e-17,33;CL:0000047,1.36e-17,33;CL:0000031,1.36e-17,33;CL:0000404,1.36e-17,33;CL:0000393,2.65e-14,39;CL:0000211,2.65e-14,39;CL:0002319,1.27e-12,43;CL:0000221,2.99e-12,44;CL:0000133,2.99e-12,44;CL:0002609,4.14e-10,6;CL:0002612,3.56e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.88e-27!34;UBERON:0001049!1.41e-23!52;UBERON:0005068!1.41e-23!52;UBERON:0006241!1.41e-23!52;UBERON:0007135!1.41e-23!52;UBERON:0001017!3.00e-22!73;UBERON:0005743!3.00e-22!73;UBERON:0002791!3.53e-22!29;UBERON:0003528!3.53e-22!29;UBERON:0001893!3.53e-22!29;UBERON:0000073!5.93e-22!75;UBERON:0001016!5.93e-22!75;UBERON:0000955!1.79e-20!50;UBERON:0006238!1.79e-20!50;UBERON:0002616!1.38e-19!49;UBERON:0003080!2.92e-19!40;UBERON:0004121!5.58e-19!102;UBERON:0000924!5.58e-19!102;UBERON:0006601!5.58e-19!102;UBERON:0002346!7.72e-19!71;UBERON:0003075!7.72e-19!71;UBERON:0007284!7.72e-19!71;UBERON:0002780!1.64e-18!39;UBERON:0001890!1.64e-18!39;UBERON:0006240!1.64e-18!39;UBERON:0000033!2.35e-18!63;UBERON:0003056!3.31e-18!49;UBERON:0000956!4.34e-16!21;UBERON:0001869!4.34e-16!21;UBERON:0000203!4.34e-16!21;UBERON:0002619!1.49e-12!17;UBERON:0000025!3.72e-12!114;UBERON:0002021!1.50e-11!10;UBERON:0000411!1.50e-11!10;UBERON:0001950!1.50e-11!10;UBERON:0004111!2.43e-11!122;UBERON:0007811!1.98e-09!86;UBERON:0000153!1.63e-08!94;UBERON:0003103!1.99e-07!43;UBERON:0002420!3.18e-07!8;UBERON:0007245!3.18e-07!8;UBERON:0010009!3.18e-07!8;UBERON:0010011!3.18e-07!8;UBERON:0000454!3.18e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.73e-50,34;UBERON:0000073,9.92e-40,54;UBERON:0003528,5.20e-39,29;UBERON:0002791,5.20e-39,29;UBERON:0001893,5.20e-39,29;UBERON:0001049,6.32e-36,52;UBERON:0005068,6.32e-36,52;UBERON:0006241,6.32e-36,52;UBERON:0007135,6.32e-36,52;UBERON:0000956,9.00e-34,21;UBERON:0001869,9.00e-34,21;UBERON:0000203,9.00e-34,21;UBERON:0001017,3.01e-32,73;UBERON:0003080,4.40e-32,40;UBERON:0001016,3.26e-31,75;UBERON:0002780,2.37e-30,39;UBERON:0001890,2.37e-30,39;UBERON:0006240,2.37e-30,39;UBERON:0000955,4.44e-29,47;UBERON:0006238,4.44e-29,47;UBERON:0002346,5.03e-28,64;UBERON:0003075,5.03e-28,64;UBERON:0007284,5.03e-28,64;UBERON:0002616,3.49e-27,46;UBERON:0002021,3.84e-27,10;UBERON:0000411,3.84e-27,10;UBERON:0001950,3.84e-27,10;UBERON:0003056,3.49e-25,49;UBERON:0002619,6.66e-25,17;UBERON:0010371,8.44e-24,73;UBERON:0004121,2.99e-23,95;UBERON:0000924,2.99e-23,95;UBERON:0006601,2.99e-23,95;UBERON:0010314,4.56e-19,92;UBERON:0000025,3.78e-14,114;UBERON:0004111,8.48e-13,122;UBERON:0001948,1.25e-12,5;UBERON:0002315,1.25e-12,5;UBERON:0002240,1.80e-10,6;UBERON:0005174,1.80e-10,6;UBERON:0001137,1.80e-10,6;UBERON:0002257,3.56e-08,3;UBERON:0011216,6.51e-08,194;UBERON:0000483,4.87e-07,174;UBERON:0002420,5.25e-07,8;UBERON:0007245,5.25e-07,8;UBERON:0010009,5.25e-07,8;UBERON:0010011,5.25e-07,8;UBERON:0000454,5.25e-07,8;UBERON:0000119,6.93e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,1.68259969081106,2.85650984403804,2.20868540951614,1.34739879136449,0.575072826109418,2.75765635983006,0,1.65993539510744,1.68967186581868,1.05509030184155,1.28082701043374,0.52091337055676,1.67509799400829,0.56276261003168,1.5279824777681,3.24091444021034,2.27794689278565,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,1.04853447583376,0.915001205637253,1.88481528169297,7.64827008846016,10.4843337505436,0.83115217823824,1.62241263067758,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.925602677324269,0.465067889500816,0.268273401399619,1.63471479314037,0.822799249567402,0.492502392237286,0.405344047729279,0.438599962275997,0.439100230582101,0.536825675041487,0.420579897128254,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,14.6835479080437,10.1271552031579,10.8850147553485,11.1704568523397,15.7568979547248,18.8848474347425,9.45031500324528,13.0593148935024,15.8599843144472,19.6748918465692,0,0,0,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.726732083161643,0.376437521661322,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0|short_description=p5@Fhod3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225288 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q76LL6,F8WHD7,E9Q1S4 | |||
|association_with_transcript=-155bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end | |||
|cluster_id=chr18:24867755..24867790,+ | |||
|description=CAGE_peak_5_at_Fhod3_5end | |||
|id=chr18:24867755..24867790,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.31e-17!23;CL:0000337!1.31e-17!23;CL:0000540!5.94e-13!33;CL:0000047!5.94e-13!33;CL:0000031!5.94e-13!33;CL:0000404!5.94e-13!33;CL:0000393!1.39e-09!39;CL:0000211!1.39e-09!39;CL:0000221!9.30e-09!44;CL:0000133!9.30e-09!44;CL:0002319!1.68e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.54e-27,23;CL:0000337,6.54e-27,23;CL:0000540,1.36e-17,33;CL:0000047,1.36e-17,33;CL:0000031,1.36e-17,33;CL:0000404,1.36e-17,33;CL:0000393,2.65e-14,39;CL:0000211,2.65e-14,39;CL:0002319,1.27e-12,43;CL:0000221,2.99e-12,44;CL:0000133,2.99e-12,44;CL:0002609,4.14e-10,6;CL:0002612,3.56e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.88e-27!34;UBERON:0001049!1.41e-23!52;UBERON:0005068!1.41e-23!52;UBERON:0006241!1.41e-23!52;UBERON:0007135!1.41e-23!52;UBERON:0001017!3.00e-22!73;UBERON:0005743!3.00e-22!73;UBERON:0002791!3.53e-22!29;UBERON:0003528!3.53e-22!29;UBERON:0001893!3.53e-22!29;UBERON:0000073!5.93e-22!75;UBERON:0001016!5.93e-22!75;UBERON:0000955!1.79e-20!50;UBERON:0006238!1.79e-20!50;UBERON:0002616!1.38e-19!49;UBERON:0003080!2.92e-19!40;UBERON:0004121!5.58e-19!102;UBERON:0000924!5.58e-19!102;UBERON:0006601!5.58e-19!102;UBERON:0002346!7.72e-19!71;UBERON:0003075!7.72e-19!71;UBERON:0007284!7.72e-19!71;UBERON:0002780!1.64e-18!39;UBERON:0001890!1.64e-18!39;UBERON:0006240!1.64e-18!39;UBERON:0000033!2.35e-18!63;UBERON:0003056!3.31e-18!49;UBERON:0000956!4.34e-16!21;UBERON:0001869!4.34e-16!21;UBERON:0000203!4.34e-16!21;UBERON:0002619!1.49e-12!17;UBERON:0000025!3.72e-12!114;UBERON:0002021!1.50e-11!10;UBERON:0000411!1.50e-11!10;UBERON:0001950!1.50e-11!10;UBERON:0004111!2.43e-11!122;UBERON:0007811!1.98e-09!86;UBERON:0000153!1.63e-08!94;UBERON:0003103!1.99e-07!43;UBERON:0002420!3.18e-07!8;UBERON:0007245!3.18e-07!8;UBERON:0010009!3.18e-07!8;UBERON:0010011!3.18e-07!8;UBERON:0000454!3.18e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.73e-50,34;UBERON:0000073,9.92e-40,54;UBERON:0003528,5.20e-39,29;UBERON:0002791,5.20e-39,29;UBERON:0001893,5.20e-39,29;UBERON:0001049,6.32e-36,52;UBERON:0005068,6.32e-36,52;UBERON:0006241,6.32e-36,52;UBERON:0007135,6.32e-36,52;UBERON:0000956,9.00e-34,21;UBERON:0001869,9.00e-34,21;UBERON:0000203,9.00e-34,21;UBERON:0001017,3.01e-32,73;UBERON:0003080,4.40e-32,40;UBERON:0001016,3.26e-31,75;UBERON:0002780,2.37e-30,39;UBERON:0001890,2.37e-30,39;UBERON:0006240,2.37e-30,39;UBERON:0000955,4.44e-29,47;UBERON:0006238,4.44e-29,47;UBERON:0002346,5.03e-28,64;UBERON:0003075,5.03e-28,64;UBERON:0007284,5.03e-28,64;UBERON:0002616,3.49e-27,46;UBERON:0002021,3.84e-27,10;UBERON:0000411,3.84e-27,10;UBERON:0001950,3.84e-27,10;UBERON:0003056,3.49e-25,49;UBERON:0002619,6.66e-25,17;UBERON:0010371,8.44e-24,73;UBERON:0004121,2.99e-23,95;UBERON:0000924,2.99e-23,95;UBERON:0006601,2.99e-23,95;UBERON:0010314,4.56e-19,92;UBERON:0000025,3.78e-14,114;UBERON:0004111,8.48e-13,122;UBERON:0001948,1.25e-12,5;UBERON:0002315,1.25e-12,5;UBERON:0002240,1.80e-10,6;UBERON:0005174,1.80e-10,6;UBERON:0001137,1.80e-10,6;UBERON:0002257,3.56e-08,3;UBERON:0011216,6.51e-08,194;UBERON:0000483,4.87e-07,174;UBERON:0002420,5.25e-07,8;UBERON:0007245,5.25e-07,8;UBERON:0010009,5.25e-07,8;UBERON:0010011,5.25e-07,8;UBERON:0000454,5.25e-07,8;UBERON:0000119,6.93e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,4.23192783417626,0.633831403506179,0,0,0,0,0,0,0,2.69592992002042,2.16009501330705,1.68259969081106,2.85650984403804,2.20868540951614,1.34739879136449,0.575072826109418,2.75765635983006,0,1.65993539510744,1.68967186581868,1.05509030184155,1.28082701043374,0.52091337055676,1.67509799400829,0.56276261003168,1.5279824777681,3.24091444021034,2.27794689278565,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,1.04853447583376,0.915001205637253,1.88481528169297,7.64827008846016,10.4843337505436,0.83115217823824,1.62241263067758,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.374806898238915,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.925602677324269,0.465067889500816,0.268273401399619,1.63471479314037,0.822799249567402,0.492502392237286,0.405344047729279,0.438599962275997,0.439100230582101,0.536825675041487,0.420579897128254,1.74937841044784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0.790575555893047,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0,0,0.370850604021019,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,14.6835479080437,10.1271552031579,10.8850147553485,11.1704568523397,15.7568979547248,18.8848474347425,9.45031500324528,13.0593148935024,15.8599843144472,19.6748918465692,0,0,0,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.402048282689293,0,0.115884325944855,0.192909220463705,0.824171801606613,0.735994600671987,0,0.177475806159338,0,0.726732083161643,0.376437521661322,0,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p5@Fhod3 | |||
}} |
Latest revision as of 02:56, 27 September 2015
Short description: | p5@Fhod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fhod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -155bp_to_ENSMUST00000037097, ENSMUST00000091991, ENSMUST00000115819, ENSMUST00000115820, ENSMUST00000169491, NM_175276, uc008eha.1, uc008ehb.1, uc008ehc.1, uc012bak.1_5end |
EntrezGene: | Fhod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.54e-27 | 23 |
neuroblast (sensu Vertebrata) | 6.54e-27 | 23 |
neuron | 1.36e-17 | 33 |
neuronal stem cell | 1.36e-17 | 33 |
neuroblast | 1.36e-17 | 33 |
electrically signaling cell | 1.36e-17 | 33 |
electrically responsive cell | 2.65e-14 | 39 |
electrically active cell | 2.65e-14 | 39 |
neural cell | 1.27e-12 | 43 |
ectodermal cell | 2.99e-12 | 44 |
neurectodermal cell | 2.99e-12 | 44 |
neuron of cerebral cortex | 4.14e-10 | 6 |
neuron of the ventral spinal cord | 3.56e-08 | 3 |