FFCP PHASE1:Mm9::chr1:42749945..42749956,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:42749945..42749956,-
|short_description=p5@2610017I09Rik
|description=CAGE_peak_5_at_2610017I09Rik_5end
|association_with_transcript=3bp_to_uc007aus.1,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66297 | |EntrezGene=66297 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2307 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_uc007aus.1,uc007aut.1_5end | |||
|cluster_id=chr1:42749945..42749956,- | |||
|description=CAGE_peak_5_at_2610017I09Rik_5end | |||
|id=chr1:42749945..42749956,- | |||
|ontology_enrichment_celltype=CL:0000117!2.46e-14!23;CL:0000337!2.46e-14!23;CL:0000221!1.37e-13!44;CL:0000133!1.37e-13!44;CL:0002319!5.13e-13!43;CL:0000540!1.49e-11!33;CL:0000047!1.49e-11!33;CL:0000031!1.49e-11!33;CL:0000404!1.49e-11!33;CL:0000055!9.13e-10!50;CL:0000393!1.58e-08!39;CL:0000211!1.58e-08!39;CL:0002609!1.12e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.82e-15,23;CL:0000337,2.82e-15,23;CL:0002609,7.32e-13,6;CL:0002319,2.01e-12,43;CL:0000221,5.05e-12,44;CL:0000133,5.05e-12,44;CL:0000540,7.03e-11,33;CL:0000047,7.03e-11,33;CL:0000031,7.03e-11,33;CL:0000404,7.03e-11,33;CL:0000393,1.35e-08,39;CL:0000211,1.35e-08,39;CL:0002608,2.32e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-28!73;UBERON:0005743!1.26e-28!73;UBERON:0000073!2.57e-27!75;UBERON:0001016!2.57e-27!75;UBERON:0002020!2.13e-24!34;UBERON:0001049!2.63e-23!52;UBERON:0005068!2.63e-23!52;UBERON:0006241!2.63e-23!52;UBERON:0007135!2.63e-23!52;UBERON:0002791!9.82e-23!29;UBERON:0003528!9.82e-23!29;UBERON:0001893!9.82e-23!29;UBERON:0000955!1.77e-22!50;UBERON:0006238!1.77e-22!50;UBERON:0002616!1.18e-21!49;UBERON:0003080!2.52e-19!40;UBERON:0000033!6.97e-19!63;UBERON:0002780!7.67e-19!39;UBERON:0001890!7.67e-19!39;UBERON:0006240!7.67e-19!39;UBERON:0000956!1.92e-18!21;UBERON:0001869!1.92e-18!21;UBERON:0000203!1.92e-18!21;UBERON:0004121!2.92e-17!102;UBERON:0000924!2.92e-17!102;UBERON:0006601!2.92e-17!102;UBERON:0002346!4.63e-17!71;UBERON:0003075!4.63e-17!71;UBERON:0007284!4.63e-17!71;UBERON:0003056!2.20e-15!49;UBERON:0002619!1.81e-14!17;UBERON:0002021!1.22e-10!10;UBERON:0000411!1.22e-10!10;UBERON:0001950!1.22e-10!10;UBERON:0007811!7.27e-10!86;UBERON:0000153!6.81e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.87e-34,29;UBERON:0002791,2.87e-34,29;UBERON:0001893,2.87e-34,29;UBERON:0000956,2.93e-28,21;UBERON:0001869,2.93e-28,21;UBERON:0000203,2.93e-28,21;UBERON:0002020,3.22e-28,34;UBERON:0002780,7.66e-28,39;UBERON:0001890,7.66e-28,39;UBERON:0006240,7.66e-28,39;UBERON:0001017,2.19e-27,73;UBERON:0003080,5.78e-27,40;UBERON:0001016,2.10e-26,75;UBERON:0000955,6.15e-26,47;UBERON:0006238,6.15e-26,47;UBERON:0002616,1.33e-24,46;UBERON:0000073,4.07e-23,54;UBERON:0002619,4.41e-21,17;UBERON:0001049,6.65e-21,52;UBERON:0005068,6.65e-21,52;UBERON:0006241,6.65e-21,52;UBERON:0007135,6.65e-21,52;UBERON:0003056,1.10e-20,49;UBERON:0004121,7.41e-19,95;UBERON:0000924,7.41e-19,95;UBERON:0006601,7.41e-19,95;UBERON:0002346,1.32e-15,64;UBERON:0003075,1.32e-15,64;UBERON:0007284,1.32e-15,64;UBERON:0002021,1.40e-15,10;UBERON:0000411,1.40e-15,10;UBERON:0001950,1.40e-15,10;UBERON:0010371,5.96e-14,73;UBERON:0010314,1.43e-09,92;UBERON:0000369,6.92e-09,5;UBERON:0002435,6.92e-09,5;UBERON:0000204,6.92e-09,5;UBERON:0010082,6.92e-09,5;UBERON:0002420,2.46e-07,8;UBERON:0007245,2.46e-07,8;UBERON:0010009,2.46e-07,8;UBERON:0010011,2.46e-07,8;UBERON:0000454,2.46e-07,8;UBERON:0001954,3.33e-07,7;UBERON:0003022,3.33e-07,7;UBERON:0002421,3.33e-07,7;UBERON:0000349,3.33e-07,7;UBERON:0002600,3.33e-07,7 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,0.439372365468944,0,0.699932108126813,2.87505128729943,0,0,0,0,0,0,4.65327859977075,8.46385566835253,3.80298842103708,0,0,0,0,0,1.49800055259202,1.53687322128622,16.071889907814,14.7156472781543,11.3575479129746,0.285650984403804,0.441737081903227,19.4760370751777,15.1435844208813,22.0612508786405,0,1.27687338085188,1.22885226604995,2.2420668914133,2.19570344645783,2.08365348222704,1.11673199600552,0,0.763991238884051,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,3.20250421973039,4.90051973240171,4.86708096538374,7.92717917724025,1.0389402227978,1.46017136760982,0,0,0.758168275301024,0,0.130120442962704,0,0,0,0,0.512454881139399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.193952487167626,0.140271639780637,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,17.0320337507655,17.7597609166213,21.1379414282736,5.48066015816514,5.2877572817279,0.675022500231806,6.75481804836331,8.60970577069989,3.62432218226274,4.25528125095124,8.37952234142165,1.87806966329548,1.45864030240976,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,0,1.26348605881899,1.77435509923168,0.377252682772152,0.936415074698824,0.704276676453562,0.574354689556133,2.85776214769844,0.695305955669133,0.38581844092741,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.715308569841963,0.436039249896986,0.564656282491984,1.09998990259179,0.365855945745545,0.789209134313529,1.22223702461276,2.24456908663095,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,1.24905288968973,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,0.439372365468944,0,0.699932108126813,2.87505128729943,0,0,0,0,0,0,4.65327859977075,8.46385566835253,3.80298842103708,0,0,0,0,0,1.49800055259202,1.53687322128622,16.071889907814,14.7156472781543,11.3575479129746,0.285650984403804,0.441737081903227,19.4760370751777,15.1435844208813,22.0612508786405,0,1.27687338085188,1.22885226604995,2.2420668914133,2.19570344645783,2.08365348222704,1.11673199600552,0,0.763991238884051,0.294628585473668,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,3.20250421973039,4.90051973240171,4.86708096538374,7.92717917724025,1.0389402227978,1.46017136760982,0,0,0.758168275301024,0,0.130120442962704,0,0,0,0,0.512454881139399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0.193952487167626,0.140271639780637,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.703270119553219,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5540442228096,17.0320337507655,17.7597609166213,21.1379414282736,5.48066015816514,5.2877572817279,0.675022500231806,6.75481804836331,8.60970577069989,3.62432218226274,4.25528125095124,8.37952234142165,1.87806966329548,1.45864030240976,0.209613162627982,0.183843508450014,0.888986911206461,1.03017528619447,0,1.26348605881899,1.77435509923168,0.377252682772152,0.936415074698824,0.704276676453562,0.574354689556133,2.85776214769844,0.695305955669133,0.38581844092741,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.715308569841963,0.436039249896986,0.564656282491984,1.09998990259179,0.365855945745545,0.789209134313529,1.22223702461276,2.24456908663095,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0.385813221962283,1.24905288968973,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p5@2610017I09Rik | |||
}} | }} |
Latest revision as of 03:45, 27 September 2015
Short description: | p5@2610017I09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2610017I09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2307 |
Association with transcript: | 3bp_to_uc007aus.1, uc007aut.1_5end |
EntrezGene: | 2610017I09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.82e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.82e-15 | 23 |
neuron of cerebral cortex | 7.32e-13 | 6 |
neural cell | 2.01e-12 | 43 |
ectodermal cell | 5.05e-12 | 44 |
neurectodermal cell | 5.05e-12 | 44 |
neuron | 7.03e-11 | 33 |
neuronal stem cell | 7.03e-11 | 33 |
neuroblast | 7.03e-11 | 33 |
electrically signaling cell | 7.03e-11 | 33 |
electrically responsive cell | 1.35e-08 | 39 |
electrically active cell | 1.35e-08 | 39 |
hippocampal neuron | 2.32e-07 | 3 |