FFCP PHASE1:Mm9::chr13:120217223..120217253,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218693 | |EntrezGene=218693 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=143 | |MCL_coexpression_id=143 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z3J6 | |UniProt=D3Z3J6 | ||
|association_with_transcript=-153bp_to_NM_001079849,uc007rzc.1_5end | |association_with_transcript=-153bp_to_NM_001079849,uc007rzc.1_5end | ||
|cluster_id=chr13:120217223..120217253,+ | |||
|description=CAGE_peak_3_at_Paip1_5end | |description=CAGE_peak_3_at_Paip1_5end | ||
|id=chr13:120217223..120217253,+ | |id=chr13:120217223..120217253,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!9.59e-09!47;UBERON:0000025!2.54e-08!114;UBERON:0004111!1.25e-07!122;UBERON:0007100!1.54e-07!18;UBERON:0000948!1.54e-07!18;UBERON:0005498!1.54e-07!18;UBERON:0004140!1.54e-07!18;UBERON:0009881!1.54e-07!18;UBERON:0004141!1.54e-07!18;UBERON:0003084!1.54e-07!18;UBERON:0007005!1.54e-07!18;UBERON:0004139!1.54e-07!18;UBERON:0004291!1.54e-07!18;UBERON:0003103!7.24e-07!43 | |ontology_enrichment_uberon=UBERON:0003914!9.59e-09!47;UBERON:0000025!2.54e-08!114;UBERON:0004111!1.25e-07!122;UBERON:0007100!1.54e-07!18;UBERON:0000948!1.54e-07!18;UBERON:0005498!1.54e-07!18;UBERON:0004140!1.54e-07!18;UBERON:0009881!1.54e-07!18;UBERON:0004141!1.54e-07!18;UBERON:0003084!1.54e-07!18;UBERON:0007005!1.54e-07!18;UBERON:0004139!1.54e-07!18;UBERON:0004291!1.54e-07!18;UBERON:0003103!7.24e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,9.53e-09,47;UBERON:0000025,2.57e-08,114;UBERON:0004111,1.25e-07,122;UBERON:0007100,1.53e-07,18;UBERON:0000948,1.53e-07,18;UBERON:0005498,1.53e-07,18;UBERON:0004140,1.53e-07,18;UBERON:0009881,1.53e-07,18;UBERON:0004141,1.53e-07,18;UBERON:0003084,1.53e-07,18;UBERON:0007005,1.53e-07,18;UBERON:0004139,1.53e-07,18;UBERON:0004291,1.53e-07,18;UBERON:0010314,4.71e-07,92;UBERON:0003103,7.13e-07,43 | |||
|phase1_expression=4.96461426024861,3.14077866875425,4.54999239389536,2.72217790176147,4.00716583957078,3.18970616632591,4.20502753071946,0.645616617207881,0.703943610758334,0.936258105287974,0.68487187290202,0.8774937489487,0.171200729931206,0.174840804837995,0.999329285446988,2.42970320867791,2.09868563438444,0.946386496074713,0.548457734422955,0.84877930359606,2.38121212422995,2.97872853602656,3.91799683708403,3.99981056983517,3.89995777814189,5.7423196411502,6.46142994238612,3.878482188346,3.23039813075836,5.54466285471848,3.76941868114018,0,0,0,4.33277429626912,2.32728503501889,2.45003227514843,1.67412652294763,3.906676722619,1.0470474879476,1.76469446409304,2.73218193983378,4.36959317728038,3.39921408534059,4.1564541800001,2.9367480345869,0.782391344348039,1.74420125104357,3.73466510648602,3.4997381833371,1.81982348112971,2.87505128729943,1.51004345451963,2.17608642603403,1.34437519656986,2.82985379639542,2.0057340795713,4.12537673821954,4.85559506063035,2.64495489636016,4.43681982454325,1.69422266034566,0,3.5995988691256,1.97773272513395,1.4209602298922,4.49400165777607,2.68952813725088,4.66603255388149,4.72520784160917,2.73422449756797,5.99867067247988,5.74258206474195,2.32732518508413,3.06705507258356,3.67687514644008,1.10115880999389,3.57524546638526,2.76491759861238,5.40733779693795,6.58711033937349,7.8137005583514,2.79182999001381,3.37657566019008,1.68078072554491,5.59794312399969,7.26095572075425,6.89677949553612,1.66597625333005,1.13357340160178,2.6087803983151,4.30211938490693,6.11974200336975,6.47643829965381,5.19821133958135,7.16843019355737,2.94933282276679,1.70430322578058,1.29893002301434,1.7666978725517,3.38024207464033,1.28326477414318,5.09610479413291,0,2.59789249213457,3.54703811665138,3.0331466700887,3.9964357901671,1.29468941823586,8.75808620482466,4.68410382268567,5.48037860961854,7.84092690670599,6.33035090321015,9.64227398512779,8.54532821041793,2.71914464507811,1.15679485535929,2.65383165584962,5.01477234836968,2.42925670306433,3.39412677194655,1.86391761218122,4.39171195517321,2.30391377494801,3.32094171771169,1.31796636956512,1.79970819298022,1.65191295194984,3.14560342750128,2.74500361691176,3.39266750704734,1.91206752211504,3.83573185995496,2.90903262383384,3.0825839982874,3.25885964321012,2.23932547098167,4.54900965180614,1.47309299120532,3.12289063110489,4.13823787980251,5.58192602396583,2.26057226753573,2.99360596265843,4.22775276940004,3.5606655332697,3.10444044886819,4.31135985865684,1.70195472151037,2.28736461413134,1.7535658594206,1.94633074457919,3.1342694986995,3.49829631893504,2.7864797354589,1.40442637462647,2.05878325691772,2.27330799516474,3.72826390563903,4.45599513964083,3.96136535214233,6.39210786080068,6.29645541591692,5.86215028972037,10.6965614585188,5.09719462659276,8.05680862333469,9.05079174524142,7.05920095540109,7.86367452594801,6.57899943413995,7.46470391989572,10.0654814070279,3.15434922846191,3.2929475961371,2.64335026387038,4.23120906661671,1.91959425481711,2.55460339046482,2.44848176511977,3.83198696784351,3.55804870151792,3.23383564391351,3.32170343081158,4.6115707322723,4.27269854960458,5.96869416123452,3.50935356814416,3.59527763461689,2.16138049874694,2.58883655230677,2.27601481143698,4.11294645395024,2.25415471346161,4.07302655690629,3.10323979468201,4.34842083319975,3.09859031908861,3.69025369949005,3.29697328466887,3.82531208157582,7.70776830426587,2.50267658574141,2.94838492669805,2.69834534861824,3.44862206360455,1.92941727801933,3.56476192493988,2.30156909960649,4.53978634970099,4.94210543738547,2.87536413054709,5.58211421502755,6.86482880852033,5.05157755894223,2.51156378930677,6.27176577772377,2.77129785249907,3.03186258832776,3.25929952884052,4.2436271443797,2.81628297946203,3.51763140627813,4.04674189506223,6.24427673144956,4.57141917907954,5.53661724121937,4.9430978283821,2.13022309130459,2.76295970985433,4.48412081602686,7.53956419696361,2.71952841909355,1.47529281905711,4.69092468718045,2.24770825982909,3.16471553798949,0.819674726883377,1.76729649043061,2.52406575533005,3.12350995437311,4.30846795465598,3.34556317133573,1.78238939265915,1.98153571552183,4.45291771842384,1.75353514746787,2.37172666767914,1.92792789853084,2.83880170416537,2.13678724400706,3.09485222771795,1.15479086080775,2.65490276679926,1.94224508923985,1.209294227859,2.07465587731488,1.47650946440386,2.45948118355142,1.80899805217755,2.54473610634254,2.49548164869305,2.84433082142234,0,2.06271086496374,0.680879211507576,3.24109969256358,1.68166288917581,2.7863814554107,1.59606210278046,2.67553226403106,2.96188237083818,3.04464949114599,1.40803024838226,3.1774810629573,1.10264199027481,0.8244312647074,3.87514624070173,2.53314284698255,3.34242563208782,2.46211349617592,5.53813589596716,2.41052892613663,1.02522528478712,2.06386867963222,1.48155621895769,1.50694765603753,1.0935538217682,0.457556346413045,1.86976272993241,1.6794174278839,1.65839968565309,1.90934123603023,1.73984796469624,2.23651413839534,2.37611749807963,1.67270636811575,2.83871332870031,2.42755823492677,2.72756403893609,1.83229159388821,2.59229946583586,4.97071450469541,4.50954350947352,3.28936401296753,3.47462829959905,4.27792614356905,2.97067593998782,3.37912250981556,3.99014611395563,4.81756223922615,2.9360616439199,4.59009829569411,2.88030006257865,0.948033361884535,2.63542779877213,2.56777392912068,2.07873316764472,3.22248052201467,0.993406773906324,1.68273629327956,1.62458479892035,1.61546319917036,1.752756553065,1.20991422164209,0.877120926657772,1.82802499116626,1.05189211963412,0.680191150845634,13.763129109192,41.5375156101872,12.2555769945777,1.54551675225752,1.87682475451182,1.83151624267265,1.92931541171159,3.51100472824754,3.3885110557024,2.76195141904306,4.01026859407578,3.26521046453006,2.74033007908257,0.755393897389701,0.675022500231806,4.5032120322422,3.62513927187364,3.10656187051092,2.28332164685189,2.39414924040619,2.73173769206615,4.132814190161,3.14419743941973,4.41224420280034,3.55594764482584,3.91466608753899,4.1719497246936,2.52697211763797,3.29523089857312,3.39527414494937,2.71560371662659,3.20125762024346,2.41228969613576,4.76293691283074,3.59241410429052,3.47236596834669,2.88460130562315,3.23837624295674,3.42869252385415,1.77475806159337,2.86123427936785,4.50573891560218,3.19971893412124,3.21535509988371,2.37806364734604,2.63069711437843,2.58027816307137,5.05028044491965,3.32178050747688,3.44765688314472,1.22769312950907,4.02835787083512,3.66522560864169,3.99696924700713,2.57324769289949,4.94203424311086,4.20834330551455,3.52946270591225,3.47801753430632 | |phase1_expression=4.96461426024861,3.14077866875425,4.54999239389536,2.72217790176147,4.00716583957078,3.18970616632591,4.20502753071946,0.645616617207881,0.703943610758334,0.936258105287974,0.68487187290202,0.8774937489487,0.171200729931206,0.174840804837995,0.999329285446988,2.42970320867791,2.09868563438444,0.946386496074713,0.548457734422955,0.84877930359606,2.38121212422995,2.97872853602656,3.91799683708403,3.99981056983517,3.89995777814189,5.7423196411502,6.46142994238612,3.878482188346,3.23039813075836,5.54466285471848,3.76941868114018,0,0,0,4.33277429626912,2.32728503501889,2.45003227514843,1.67412652294763,3.906676722619,1.0470474879476,1.76469446409304,2.73218193983378,4.36959317728038,3.39921408534059,4.1564541800001,2.9367480345869,0.782391344348039,1.74420125104357,3.73466510648602,3.4997381833371,1.81982348112971,2.87505128729943,1.51004345451963,2.17608642603403,1.34437519656986,2.82985379639542,2.0057340795713,4.12537673821954,4.85559506063035,2.64495489636016,4.43681982454325,1.69422266034566,0,3.5995988691256,1.97773272513395,1.4209602298922,4.49400165777607,2.68952813725088,4.66603255388149,4.72520784160917,2.73422449756797,5.99867067247988,5.74258206474195,2.32732518508413,3.06705507258356,3.67687514644008,1.10115880999389,3.57524546638526,2.76491759861238,5.40733779693795,6.58711033937349,7.8137005583514,2.79182999001381,3.37657566019008,1.68078072554491,5.59794312399969,7.26095572075425,6.89677949553612,1.66597625333005,1.13357340160178,2.6087803983151,4.30211938490693,6.11974200336975,6.47643829965381,5.19821133958135,7.16843019355737,2.94933282276679,1.70430322578058,1.29893002301434,1.7666978725517,3.38024207464033,1.28326477414318,5.09610479413291,0,2.59789249213457,3.54703811665138,3.0331466700887,3.9964357901671,1.29468941823586,8.75808620482466,4.68410382268567,5.48037860961854,7.84092690670599,6.33035090321015,9.64227398512779,8.54532821041793,2.71914464507811,1.15679485535929,2.65383165584962,5.01477234836968,2.42925670306433,3.39412677194655,1.86391761218122,4.39171195517321,2.30391377494801,3.32094171771169,1.31796636956512,1.79970819298022,1.65191295194984,3.14560342750128,2.74500361691176,3.39266750704734,1.91206752211504,3.83573185995496,2.90903262383384,3.0825839982874,3.25885964321012,2.23932547098167,4.54900965180614,1.47309299120532,3.12289063110489,4.13823787980251,5.58192602396583,2.26057226753573,2.99360596265843,4.22775276940004,3.5606655332697,3.10444044886819,4.31135985865684,1.70195472151037,2.28736461413134,1.7535658594206,1.94633074457919,3.1342694986995,3.49829631893504,2.7864797354589,1.40442637462647,2.05878325691772,2.27330799516474,3.72826390563903,4.45599513964083,3.96136535214233,6.39210786080068,6.29645541591692,5.86215028972037,10.6965614585188,5.09719462659276,8.05680862333469,9.05079174524142,7.05920095540109,7.86367452594801,6.57899943413995,7.46470391989572,10.0654814070279,3.15434922846191,3.2929475961371,2.64335026387038,4.23120906661671,1.91959425481711,2.55460339046482,2.44848176511977,3.83198696784351,3.55804870151792,3.23383564391351,3.32170343081158,4.6115707322723,4.27269854960458,5.96869416123452,3.50935356814416,3.59527763461689,2.16138049874694,2.58883655230677,2.27601481143698,4.11294645395024,2.25415471346161,4.07302655690629,3.10323979468201,4.34842083319975,3.09859031908861,3.69025369949005,3.29697328466887,3.82531208157582,7.70776830426587,2.50267658574141,2.94838492669805,2.69834534861824,3.44862206360455,1.92941727801933,3.56476192493988,2.30156909960649,4.53978634970099,4.94210543738547,2.87536413054709,5.58211421502755,6.86482880852033,5.05157755894223,2.51156378930677,6.27176577772377,2.77129785249907,3.03186258832776,3.25929952884052,4.2436271443797,2.81628297946203,3.51763140627813,4.04674189506223,6.24427673144956,4.57141917907954,5.53661724121937,4.9430978283821,2.13022309130459,2.76295970985433,4.48412081602686,7.53956419696361,2.71952841909355,1.47529281905711,4.69092468718045,2.24770825982909,3.16471553798949,0.819674726883377,1.76729649043061,2.52406575533005,3.12350995437311,4.30846795465598,3.34556317133573,1.78238939265915,1.98153571552183,4.45291771842384,1.75353514746787,2.37172666767914,1.92792789853084,2.83880170416537,2.13678724400706,3.09485222771795,1.15479086080775,2.65490276679926,1.94224508923985,1.209294227859,2.07465587731488,1.47650946440386,2.45948118355142,1.80899805217755,2.54473610634254,2.49548164869305,2.84433082142234,0,2.06271086496374,0.680879211507576,3.24109969256358,1.68166288917581,2.7863814554107,1.59606210278046,2.67553226403106,2.96188237083818,3.04464949114599,1.40803024838226,3.1774810629573,1.10264199027481,0.8244312647074,3.87514624070173,2.53314284698255,3.34242563208782,2.46211349617592,5.53813589596716,2.41052892613663,1.02522528478712,2.06386867963222,1.48155621895769,1.50694765603753,1.0935538217682,0.457556346413045,1.86976272993241,1.6794174278839,1.65839968565309,1.90934123603023,1.73984796469624,2.23651413839534,2.37611749807963,1.67270636811575,2.83871332870031,2.42755823492677,2.72756403893609,1.83229159388821,2.59229946583586,4.97071450469541,4.50954350947352,3.28936401296753,3.47462829959905,4.27792614356905,2.97067593998782,3.37912250981556,3.99014611395563,4.81756223922615,2.9360616439199,4.59009829569411,2.88030006257865,0.948033361884535,2.63542779877213,2.56777392912068,2.07873316764472,3.22248052201467,0.993406773906324,1.68273629327956,1.62458479892035,1.61546319917036,1.752756553065,1.20991422164209,0.877120926657772,1.82802499116626,1.05189211963412,0.680191150845634,13.763129109192,41.5375156101872,12.2555769945777,1.54551675225752,1.87682475451182,1.83151624267265,1.92931541171159,3.51100472824754,3.3885110557024,2.76195141904306,4.01026859407578,3.26521046453006,2.74033007908257,0.755393897389701,0.675022500231806,4.5032120322422,3.62513927187364,3.10656187051092,2.28332164685189,2.39414924040619,2.73173769206615,4.132814190161,3.14419743941973,4.41224420280034,3.55594764482584,3.91466608753899,4.1719497246936,2.52697211763797,3.29523089857312,3.39527414494937,2.71560371662659,3.20125762024346,2.41228969613576,4.76293691283074,3.59241410429052,3.47236596834669,2.88460130562315,3.23837624295674,3.42869252385415,1.77475806159337,2.86123427936785,4.50573891560218,3.19971893412124,3.21535509988371,2.37806364734604,2.63069711437843,2.58027816307137,5.05028044491965,3.32178050747688,3.44765688314472,1.22769312950907,4.02835787083512,3.66522560864169,3.99696924700713,2.57324769289949,4.94203424311086,4.20834330551455,3.52946270591225,3.47801753430632 | ||
|short_description=p3@Paip1 | |short_description=p3@Paip1 | ||
}} | }} |
Latest revision as of 04:05, 27 September 2015
Short description: | p3@Paip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Paip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:143 |
Association with transcript: | -153bp_to_NM_001079849, uc007rzc.1_5end |
EntrezGene: | Paip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 9.53e-09 | 47 |
tube | 2.57e-08 | 114 |
anatomical conduit | 1.25e-07 | 122 |
primary circulatory organ | 1.53e-07 | 18 |
heart | 1.53e-07 | 18 |
primitive heart tube | 1.53e-07 | 18 |
primary heart field | 1.53e-07 | 18 |
anterior lateral plate mesoderm | 1.53e-07 | 18 |
heart tube | 1.53e-07 | 18 |
heart primordium | 1.53e-07 | 18 |
cardiac mesoderm | 1.53e-07 | 18 |
cardiogenic plate | 1.53e-07 | 18 |
heart rudiment | 1.53e-07 | 18 |
structure with developmental contribution from neural crest | 4.71e-07 | 92 |
compound organ | 7.13e-07 | 43 |