FFCP PHASE1:Mm9::chr13:13876637..13876681,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14706 | |EntrezGene=14706 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=P50153 | |UniProt=P50153 | ||
|association_with_transcript=41bp_to_ENSMUST00000021734_5end | |association_with_transcript=41bp_to_ENSMUST00000021734_5end | ||
|cluster_id=chr13:13876637..13876681,+ | |||
|description=CAGE_peak_2_at_Gng4_5end | |description=CAGE_peak_2_at_Gng4_5end | ||
|id=chr13:13876637..13876681,+ | |id=chr13:13876637..13876681,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.89e-07!33;CL:0000047!1.89e-07!33;CL:0000031!1.89e-07!33;CL:0000404!1.89e-07!33;CL:0000117!3.26e-07!23;CL:0000337!3.26e-07!23 | |ontology_enrichment_celltype=CL:0000540!1.89e-07!33;CL:0000047!1.89e-07!33;CL:0000031!1.89e-07!33;CL:0000404!1.89e-07!33;CL:0000117!3.26e-07!23;CL:0000337!3.26e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.50e-07,23;CL:0000337,5.50e-07,23;CL:0000540,6.00e-07,33;CL:0000047,6.00e-07,33;CL:0000031,6.00e-07,33;CL:0000404,6.00e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.83e-22!102;UBERON:0000924!2.83e-22!102;UBERON:0006601!2.83e-22!102;UBERON:0002346!2.58e-18!71;UBERON:0003075!2.58e-18!71;UBERON:0007284!2.58e-18!71;UBERON:0001017!5.43e-18!73;UBERON:0005743!5.43e-18!73;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001049!5.76e-16!52;UBERON:0005068!5.76e-16!52;UBERON:0006241!5.76e-16!52;UBERON:0007135!5.76e-16!52;UBERON:0000955!4.66e-14!50;UBERON:0006238!4.66e-14!50;UBERON:0000033!5.14e-14!63;UBERON:0002616!2.14e-13!49;UBERON:0003056!4.18e-13!49;UBERON:0003080!2.51e-12!40;UBERON:0002780!9.16e-12!39;UBERON:0001890!9.16e-12!39;UBERON:0006240!9.16e-12!39;UBERON:0002020!6.18e-11!34;UBERON:0002791!5.60e-08!29;UBERON:0003528!5.60e-08!29;UBERON:0001893!5.60e-08!29;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10;UBERON:0000153!9.94e-07!94 | |ontology_enrichment_uberon=UBERON:0004121!2.83e-22!102;UBERON:0000924!2.83e-22!102;UBERON:0006601!2.83e-22!102;UBERON:0002346!2.58e-18!71;UBERON:0003075!2.58e-18!71;UBERON:0007284!2.58e-18!71;UBERON:0001017!5.43e-18!73;UBERON:0005743!5.43e-18!73;UBERON:0000073!1.43e-17!75;UBERON:0001016!1.43e-17!75;UBERON:0001049!5.76e-16!52;UBERON:0005068!5.76e-16!52;UBERON:0006241!5.76e-16!52;UBERON:0007135!5.76e-16!52;UBERON:0000955!4.66e-14!50;UBERON:0006238!4.66e-14!50;UBERON:0000033!5.14e-14!63;UBERON:0002616!2.14e-13!49;UBERON:0003056!4.18e-13!49;UBERON:0003080!2.51e-12!40;UBERON:0002780!9.16e-12!39;UBERON:0001890!9.16e-12!39;UBERON:0006240!9.16e-12!39;UBERON:0002020!6.18e-11!34;UBERON:0002791!5.60e-08!29;UBERON:0003528!5.60e-08!29;UBERON:0001893!5.60e-08!29;UBERON:0002021!8.35e-07!10;UBERON:0000411!8.35e-07!10;UBERON:0001950!8.35e-07!10;UBERON:0000153!9.94e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.50e-21,95;UBERON:0000924,1.50e-21,95;UBERON:0006601,1.50e-21,95;UBERON:0001017,3.08e-19,73;UBERON:0001016,9.84e-19,75;UBERON:0000073,1.40e-18,54;UBERON:0010371,2.19e-18,73;UBERON:0001049,7.79e-18,52;UBERON:0005068,7.79e-18,52;UBERON:0006241,7.79e-18,52;UBERON:0007135,7.79e-18,52;UBERON:0002346,2.17e-17,64;UBERON:0003075,2.17e-17,64;UBERON:0007284,2.17e-17,64;UBERON:0000955,3.74e-14,47;UBERON:0006238,3.74e-14,47;UBERON:0002616,2.24e-13,46;UBERON:0003080,2.82e-13,40;UBERON:0003056,5.92e-13,49;UBERON:0002780,1.33e-12,39;UBERON:0001890,1.33e-12,39;UBERON:0006240,1.33e-12,39;UBERON:0002020,4.47e-12,34;UBERON:0010314,1.28e-09,92;UBERON:0003528,1.59e-08,29;UBERON:0002791,1.59e-08,29;UBERON:0001893,1.59e-08,29;UBERON:0002021,4.18e-08,10;UBERON:0000411,4.18e-08,10;UBERON:0001950,4.18e-08,10 | |||
|phase1_expression=0,0.348975407639361,0,0,0,2.35030980676646,1.40167584357315,0,0.703943610758334,1.40438715793196,0.171217968225505,0.159544317990673,0,0,0,0,0,0.315462165358238,0,0,2.38121212422995,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,1.33038306393183,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,3.03474691289397,6.34789175126439,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,13.4255962669788,10.8225585066291,0.61245399607477,0.670918297127655,1.83843757322004,3.30347642998166,2.42605942361857,4.76180253094355,2.76961204233407,4.11694396210843,1.56274011167028,6.42120897703176,2.8138130501584,4.27835093775068,15.6153150301044,12.6710795911202,8.94717339961443,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,0.867426633830679,1.52232739156071,1.61430848079241,1.20578112442098,2.4693628498498,1.38233250462643,8.65182387070309,0.722996784599558,0,0,0,0,0,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,0.127070227073065,7.04016005202667,8.23501085073528,10.9319286338192,7.64827008846016,5.11430914660661,9.14267396062064,10.5456820994042,1.01839363850316,0.622034853050465,2.77995034277042,0.420883711772948,0.650602214813519,0.919608417733892,1.0803727788321,2.26057226753573,1.56483948048054,1.7935920839879,2.43624483855295,3.62184719034622,0.215567992932842,0.945530400839096,0.879755620819744,1.09597866213787,2.22437799380478,4.52727816478817,5.55611768301447,0,0,0.51469581422943,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,6.68879980465349,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,2.58643413653496,1.36474860983384,1.79763881730844,1.29682829924817,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.49095073923223,0.442655759869801,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.714130922658041,1.56106918286239,0.472905432318573,0.44292937929755,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.0137647496948,6.09500770279457,0,0.252470927204373,0.631016438832513,1.17131623288992,2.58508077279359,0.716906393857656,1.11399337041197,1.41538265394416,1.61924280669958,2.92255857911312,3.16230222357219,365.984979404438,0.141940085208269,1.42452482933804,0.977321756121456,0,1.32745138339963,2.18502572539483,0.906970670894253,1.32023555829129,2.95301892880773,1.84461088766356,0.775284879504663,1.81766864738753,2.49548164869305,1.26414703174326,0,0,20.0859367394735,0.720244376125241,1.16422815404479,2.14337035031592,4.78818630834139,3.92411398724555,4.60737257685939,12.4830629136986,0.23467170806371,0,0.661585194164886,6.26567761177624,10.4951877352339,4.58378229453985,4.8942661041286,6.72977688954751,0.874442509889552,6.86073617438886,0,0,0,0,0,0,1.86976272993241,1.39951452323658,1.38199973804424,0,0.316335993581135,0.406638934253697,0.86404272657441,0.209088296014469,1.9652630737156,1.75323650300267,3.63675205191478,0.26175594198403,0.518459893167171,4.97071450469541,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0.428736758158132,0,19.2015626489803,17.9526842237799,16.0410743763031,16.6697586873377,8.22099023724771,6.0431511791176,4.72515750162264,5.40385443869065,4.98456649882625,1.55328093525546,0.31136204275253,0,0.512200817262403,3.40349403895612,2.30574478890781,5.33146174505041,2.66696073361938,4.32673620201678,2.24643446714271,2.27427490587418,3.29523089857312,2.64076877940507,3.183811253976,2.68905640100451,3.4461281373368,2.38146845641537,3.59241410429052,2.50781986602817,2.47251540481984,2.50238164228475,1.37147700954166,2.30718548007139,2.62279808942053,1.88950341622027,2.91739079287525,2.70766745253365,2.0122077016005,1.8414879800649,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,0.818462086339379,2.78886314134739,5.20847849649082,7.49431733813838,3.97683734357194,5.58664740525576,1.72159498861959,1.54413993383661,0.463735671240843 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|phase1_expression=0,0.348975407639361,0,0,0,2.35030980676646,1.40167584357315,0,0.703943610758334,1.40438715793196,0.171217968225505,0.159544317990673,0,0,0,0,0,0.315462165358238,0,0,2.38121212422995,0,0,0.639969691173627,0.22940928106717,0.57423196411502,0.86152399231815,0.861884930743556,0.570070258369122,0.756090389279792,1.33038306393183,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0.725362142011344,0,0,0,0,3.03474691289397,6.34789175126439,3.1691570175309,0,0,0,0,0,0.898800331555214,0.768436610643109,0.207379224616955,0.405017814995072,0.210324961351382,13.4255962669788,10.8225585066291,0.61245399607477,0.670918297127655,1.83843757322004,3.30347642998166,2.42605942361857,4.76180253094355,2.76961204233407,4.11694396210843,1.56274011167028,6.42120897703176,2.8138130501584,4.27835093775068,15.6153150301044,12.6710795911202,8.94717339961443,1.06016670666458,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,3.71105347662062,0.867426633830679,1.52232739156071,1.61430848079241,1.20578112442098,2.4693628498498,1.38233250462643,8.65182387070309,0.722996784599558,0,0,0,0,0,1.46390398505774,1.25668024088073,0.766371165625774,0.958520996047362,0.599902730993408,0.127070227073065,7.04016005202667,8.23501085073528,10.9319286338192,7.64827008846016,5.11430914660661,9.14267396062064,10.5456820994042,1.01839363850316,0.622034853050465,2.77995034277042,0.420883711772948,0.650602214813519,0.919608417733892,1.0803727788321,2.26057226753573,1.56483948048054,1.7935920839879,2.43624483855295,3.62184719034622,0.215567992932842,0.945530400839096,0.879755620819744,1.09597866213787,2.22437799380478,4.52727816478817,5.55611768301447,0,0,0.51469581422943,0,0.414251545071004,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0,0,0.292399974850665,0.219550115291051,0.268412837520744,3.15434922846191,6.68879980465349,0.330418782983798,0.528901133327089,0.213288250535234,0.464473343720877,0.77320476793256,1.00841762311671,1.11189021922435,1.33157938278791,1.42358718463353,0.494096864172033,1.25667604400135,2.58643413653496,1.36474860983384,1.79763881730844,1.29682829924817,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.610953983535943,0.193952487167626,0.49095073923223,0.442655759869801,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.714130922658041,1.56106918286239,0.472905432318573,0.44292937929755,0,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,4.0137647496948,6.09500770279457,0,0.252470927204373,0.631016438832513,1.17131623288992,2.58508077279359,0.716906393857656,1.11399337041197,1.41538265394416,1.61924280669958,2.92255857911312,3.16230222357219,365.984979404438,0.141940085208269,1.42452482933804,0.977321756121456,0,1.32745138339963,2.18502572539483,0.906970670894253,1.32023555829129,2.95301892880773,1.84461088766356,0.775284879504663,1.81766864738753,2.49548164869305,1.26414703174326,0,0,20.0859367394735,0.720244376125241,1.16422815404479,2.14337035031592,4.78818630834139,3.92411398724555,4.60737257685939,12.4830629136986,0.23467170806371,0,0.661585194164886,6.26567761177624,10.4951877352339,4.58378229453985,4.8942661041286,6.72977688954751,0.874442509889552,6.86073617438886,0,0,0,0,0,0,1.86976272993241,1.39951452323658,1.38199973804424,0,0.316335993581135,0.406638934253697,0.86404272657441,0.209088296014469,1.9652630737156,1.75323650300267,3.63675205191478,0.26175594198403,0.518459893167171,4.97071450469541,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.104859344425711,0,0.288030006257865,0.632022241256357,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.549454872801795,0.428736758158132,0,19.2015626489803,17.9526842237799,16.0410743763031,16.6697586873377,8.22099023724771,6.0431511791176,4.72515750162264,5.40385443869065,4.98456649882625,1.55328093525546,0.31136204275253,0,0.512200817262403,3.40349403895612,2.30574478890781,5.33146174505041,2.66696073361938,4.32673620201678,2.24643446714271,2.27427490587418,3.29523089857312,2.64076877940507,3.183811253976,2.68905640100451,3.4461281373368,2.38146845641537,3.59241410429052,2.50781986602817,2.47251540481984,2.50238164228475,1.37147700954166,2.30718548007139,2.62279808942053,1.88950341622027,2.91739079287525,2.70766745253365,2.0122077016005,1.8414879800649,3.25929873230068,4.48913817326191,3.6776855618494,2.85662998889134,0.818462086339379,2.78886314134739,5.20847849649082,7.49431733813838,3.97683734357194,5.58664740525576,1.72159498861959,1.54413993383661,0.463735671240843 | ||
|short_description=p2@Gng4 | |short_description=p2@Gng4 | ||
}} | }} |
Latest revision as of 04:39, 27 September 2015
Short description: | p2@Gng4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gng4_5end |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | 41bp_to_ENSMUST00000021734_5end |
EntrezGene: | Gng4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.50e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.50e-07 | 23 |
neuron | 6.00e-07 | 33 |
neuronal stem cell | 6.00e-07 | 33 |
neuroblast | 6.00e-07 | 33 |
electrically signaling cell | 6.00e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.50e-21 | 95 |
ectoderm | 1.50e-21 | 95 |
presumptive ectoderm | 1.50e-21 | 95 |
central nervous system | 3.08e-19 | 73 |
nervous system | 9.84e-19 | 75 |
regional part of nervous system | 1.40e-18 | 54 |
ecto-epithelium | 2.19e-18 | 73 |
neural tube | 7.79e-18 | 52 |
neural rod | 7.79e-18 | 52 |
future spinal cord | 7.79e-18 | 52 |
neural keel | 7.79e-18 | 52 |
neurectoderm | 2.17e-17 | 64 |
neural plate | 2.17e-17 | 64 |
presumptive neural plate | 2.17e-17 | 64 |
brain | 3.74e-14 | 47 |
future brain | 3.74e-14 | 47 |
regional part of brain | 2.24e-13 | 46 |
anterior neural tube | 2.82e-13 | 40 |
pre-chordal neural plate | 5.92e-13 | 49 |
regional part of forebrain | 1.33e-12 | 39 |
forebrain | 1.33e-12 | 39 |
future forebrain | 1.33e-12 | 39 |
gray matter | 4.47e-12 | 34 |
structure with developmental contribution from neural crest | 1.28e-09 | 92 |
brain grey matter | 1.59e-08 | 29 |
regional part of telencephalon | 1.59e-08 | 29 |
telencephalon | 1.59e-08 | 29 |
occipital lobe | 4.18e-08 | 10 |
visual cortex | 4.18e-08 | 10 |
neocortex | 4.18e-08 | 10 |