FFCP PHASE1:Mm9::chr3:102273821..102273835,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:102273821..102273835,+
|short_description=p2@Ngf
|description=CAGE_peak_2_at_Ngf_5end
|association_with_transcript=-15bp_to_ENSMUST00000035952,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18049 | |EntrezGene=18049 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=41 | |||
|TSSclassifier=NA | |||
|UniProt=P01139,Q6LDU8 | |UniProt=P01139,Q6LDU8 | ||
|association_with_transcript=-15bp_to_ENSMUST00000035952,ENSMUST00000106925,NM_001112698,NM_013609,uc008qrv.2,uc012cuz.1_5end | |||
|cluster_id=chr3:102273821..102273835,+ | |||
|description=CAGE_peak_2_at_Ngf_5end | |||
|id=chr3:102273821..102273835,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.20e-20,7;CL:0000680,1.04e-16,6;CL:0000187,1.04e-16,6;CL:0000056,1.04e-16,6;CL:0002494,5.98e-13,3;CL:0000737,5.98e-13,3;CL:0000746,5.98e-13,3;CL:0000513,5.98e-13,3;CL:0000355,4.50e-11,9;CL:0002453,3.67e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.50e-11,9;UBERON:0002036,4.50e-11,9;UBERON:0002385,4.50e-11,9;UBERON:0000486,4.50e-11,9;UBERON:0007503,4.50e-11,9;UBERON:0001015,4.50e-11,9;UBERON:0002329,4.50e-11,9;UBERON:0003082,4.50e-11,9;UBERON:0003059,4.50e-11,9;UBERON:0007282,4.50e-11,9;UBERON:0004290,4.50e-11,9;UBERON:0009618,4.50e-11,9;UBERON:0000383,6.08e-10,10;UBERON:0004535,6.95e-10,23;UBERON:0001009,6.95e-10,23;UBERON:0007524,5.13e-09,11;UBERON:0003077,5.13e-09,11;UBERON:0007285,5.13e-09,11;UBERON:0000055,1.02e-07,5;UBERON:0007500,1.02e-07,5;UBERON:0001981,1.02e-07,5;UBERON:0002049,1.02e-07,5;UBERON:0007798,1.02e-07,5;UBERON:0004537,1.02e-07,5;UBERON:0006965,1.02e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.52065396829272,0.550640256485045,4.69434806608824,0.218025156380447,1.97717564461025,0.777719596297134,1.81982348112971,0,0,0,0,7.46052364504246,2.29226751951005,2.06268836910977,0,0,0,4.40497891689872,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.79760066311043,0.384218305321555,0,0,0,0,0,0,0.191690942036473,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0.681535739998656,0.906858721281426,3.18850937571846,0.860423876981386,0,0,0,0.448026887097336,10.8142203501449,0.170430322578058,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0,6.50848114398642,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.695297280769106,0.511430914660661,0,0.486723789203273,0.611036183101898,0,0.252722758433675,0,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.272145996605311,0,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.36012412292203,0.710234206755631,0.196764231747404,0.617068451549513,0,0,0.233530684734339,0.493679549740441,0.820837320395476,0.56748166682099,0.584799949701329,1.09775057645525,1.07365135008297,1.26173969138476,0.102904612379284,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.387904974335251,0.280543279561274,0.189709611372772,0.738050739898011,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,1.14754461763673,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0.218362563746178,0.539457385539283,0.0826534557253359,0,0.518459893167171,1032.04459903738,0,0.149516546043979,0,0.583353565032143,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,1.71868654031819,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.765153328275374,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.52065396829272,0.550640256485045,4.69434806608824,0.218025156380447,1.97717564461025,0.777719596297134,1.81982348112971,0,0,0,0,7.46052364504246,2.29226751951005,2.06268836910977,0,0,0,4.40497891689872,0.889294796111139,0.899899717281399,0.988866362566974,1.4209602298922,1.79760066311043,0.384218305321555,0,0,0,0,0,0,0.191690942036473,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0.681535739998656,0.906858721281426,3.18850937571846,0.860423876981386,0,0,0,0.448026887097336,10.8142203501449,0.170430322578058,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,1.01343946190039,0,6.50848114398642,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.695297280769106,0.511430914660661,0,0.486723789203273,0.611036183101898,0,0.252722758433675,0,0.260240885925407,0.229902104433473,0.540186389416048,0.30140963567143,0.272145996605311,0,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.36012412292203,0.710234206755631,0.196764231747404,0.617068451549513,0,0,0.233530684734339,0.493679549740441,0.820837320395476,0.56748166682099,0.584799949701329,1.09775057645525,1.07365135008297,1.26173969138476,0.102904612379284,0,0.264450566663544,0,0.464473343720877,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0.814605311381257,0.387904974335251,0.280543279561274,0.189709611372772,0.738050739898011,0.470996183524124,0.246794327843601,0.296452627087149,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0.964887042726734,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,1.14754461763673,0,0.631016438832513,0,0,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.824850614862677,0,0.485561272309963,0.302323556964751,0,0.590603785761546,0.307435147943927,0.258428293168221,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0,0,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0.180938774784468,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,0,0,0.609958401380546,0.324016022465404,0,0.218362563746178,0.539457385539283,0.0826534557253359,0,0.518459893167171,1032.04459903738,0,0.149516546043979,0,0.583353565032143,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,1.71868654031819,0.343706364687375,0.685082519770642,0.755393897389701,0,0,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0,0,0.685738504770831,0.177475806159338,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.765153328275374,0,0 | ||
|short_description=p2@Ngf | |||
}} | }} |
Latest revision as of 05:02, 27 September 2015
Short description: | p2@Ngf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ngf_5end |
Coexpression cluster: | MCL_coexpression_mm9:41 |
Association with transcript: | -15bp_to_ENSMUST00000035952, ENSMUST00000106925, NM_001112698, NM_013609, uc008qrv.2, uc012cuz.1_5end |
EntrezGene: | Ngf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.20e-20 | 7 |
muscle precursor cell | 1.04e-16 | 6 |
muscle cell | 1.04e-16 | 6 |
myoblast | 1.04e-16 | 6 |
cardiocyte | 5.98e-13 | 3 |
striated muscle cell | 5.98e-13 | 3 |
cardiac muscle cell | 5.98e-13 | 3 |
cardiac muscle myoblast | 5.98e-13 | 3 |
multi-potent skeletal muscle stem cell | 4.50e-11 | 9 |
oligodendrocyte precursor cell | 3.67e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.50e-11 | 9 |
striated muscle tissue | 4.50e-11 | 9 |
muscle tissue | 4.50e-11 | 9 |
multilaminar epithelium | 4.50e-11 | 9 |
epithelial vesicle | 4.50e-11 | 9 |
musculature | 4.50e-11 | 9 |
somite | 4.50e-11 | 9 |
myotome | 4.50e-11 | 9 |
presomitic mesoderm | 4.50e-11 | 9 |
presumptive segmental plate | 4.50e-11 | 9 |
dermomyotome | 4.50e-11 | 9 |
trunk paraxial mesoderm | 4.50e-11 | 9 |
musculature of body | 6.08e-10 | 10 |
cardiovascular system | 6.95e-10 | 23 |
circulatory system | 6.95e-10 | 23 |
dense mesenchyme tissue | 5.13e-09 | 11 |
paraxial mesoderm | 5.13e-09 | 11 |
presumptive paraxial mesoderm | 5.13e-09 | 11 |
vessel | 1.02e-07 | 5 |
epithelial tube open at both ends | 1.02e-07 | 5 |
blood vessel | 1.02e-07 | 5 |
vasculature | 1.02e-07 | 5 |
vascular system | 1.02e-07 | 5 |
blood vasculature | 1.02e-07 | 5 |
vascular cord | 1.02e-07 | 5 |