FFCP PHASE1:Mm9::chr13:23643531..23643541,-: Difference between revisions
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{{FFCP|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122|HGNC=|MCL_coexpression_id=154|UniProt=P62806|association_with_transcript=-14bp_to_ENSMUST00000102971_5end|description=CAGE_peak_4_at_Hist1h4a_5end,CAGE_peak_4_at_Hist1h4c_5end,CAGE_peak_4_at_Hist1h4d_5end,CAGE_peak_4_at_Hist1h4f_5end,CAGE_peak_4_at_Hist1h4h_5end,CAGE_peak_4_at_Hist1h4i_5end,CAGE_peak_4_at_Hist1h4j_5end,CAGE_peak_4_at_Hist1h4k_5end,CAGE_peak_4_at_Hist1h4m_5end,CAGE_peak_4_at_Hist1h4n_5end,CAGE_peak_4_at_Hist4h4_5end,CAGE_peak_5_at_Hist1h4b_5end,CAGE_peak_5_at_Hist2h4_5end|id=chr13:23643531..23643541,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=83.7578470358072,58.2788930757733,40.0399330662792,24.4996011158532,35.5635968261907,417.51574924487,321.684606100039,26.21203465864,5.06839399746,4.44722600011788,12.1564757440109,10.2108363514031,7.19043065711064,6.8187913886818,2259.48351439564,3238.38942663288,4743.72909558696,105.048901064293,103.93274067315,516.482206238203,40.8207792725135,487.91573420115,550.086755926598,135.513582106015,175.268690735318,187.773852265612,277.410725526444,201.034660095934,168.360749638347,284.037956239442,388.693585178749,6838.01029181331,6277.35122208812,3343.96346942576,1147.02978203231,1777.04835888228,1162.33614520167,1929.01228606641,3943.39948381162,2942.72696487672,1751.16513986833,2486.28556524874,1769.68523679855,28.7044744984316,27.4731483604884,27.8991063285756,219.069576417451,298.258413928451,37.7860234303292,35.1918117324453,152.44521315002,135.127410503073,49.4958687870322,48.5992635147601,30.5845357219642,47.3357362306142,47.2780175898949,13.4074743992135,123.210724663495,100.508286061686,136.273751753829,162.306530861114,211.652161474451,75.1416263929968,102.842101706965,100.1776962074,172.86926376912,202.867265209781,283.176331214452,323.744240119394,335.468313355454,94.8361268220628,86.5804680530325,459.340497056078,538.268165238415,432.95204849332,20.9220173898839,15.0671058940522,11.6740965274745,76.6259331712426,63.0349864420603,79.6997456951843,15.6342479440773,16.3201156909187,21.5445529365302,78.3712037359956,70.473981995556,68.5949960637106,10.7531194533121,59.7015324843606,28.1168554040627,24.0918685554788,2.03991400112325,4.85732872474035,12.9955283489534,4.48026887097336,149.432863020184,163.613109674935,276.15252289285,225.430648537597,96.4777425470261,53.8971205140135,5.09610479413291,35.5533351576666,462.424863599953,346.34293610446,382.682004876191,120.578176983327,48.1624463583739,9.79718117827843,396.41397166062,413.464119547888,278.814136182575,145.748793414386,93.4830221728853,36.9459778509246,7.91023896749996,11.8571472674328,770.49579074834,231.164828574848,605.76828513686,891.685590515673,109.971139118692,16.3957246326466,12.5668024088073,104.737392635522,1559.39384544455,2951.52143648757,1573.63769207283,8.38827580667007,18.3000241127451,54.1570257606446,17.3824320192276,11.5071955798649,10.1816141834184,15.0884374653015,178.728083557305,557.218821362607,29.3158399783063,10.7325346502102,386.978197371081,629.242059834415,393.435753624688,316.932231908509,232.480717600087,302.47649359253,288.413908194845,15.0047955028629,550.776221943412,324.31692748781,239.821382235462,288.899975339544,260.25222527516,150.444935937576,150.838305987023,290.390995288182,1737.27542541294,1439.60419239972,921.826392039303,220.796073522845,223.034283042022,211.392860155231,165.958059645232,168.036653912283,187.588809271052,127.428601723224,158.817853628575,96.3314074529148,80.3052067577785,55.8169377868924,12.4845966700618,12.7193989060039,32.9325172936576,27.1096965895951,15.5614561937454,36.0166143327495,10.2429822724977,136.985393531716,377.093626946294,320.022133823684,233.121237531667,168.204059535868,148.770911332218,131.826358896003,121.479439755395,72.7969379880128,94.7533737177016,89.9283253626002,59.4640465713316,79.9949273702257,105.691506388725,83.2410522203255,663.45831753388,380.447546990397,236.686244913469,286.537418278357,229.445792319301,107.728619351529,65.1968697751093,12.989693022205,24.9627977267786,22.5816809976895,7.11486305009157,664.544056067203,706.826146427078,791.73949770707,1044.5267650294,991.479303742186,1408.8448379066,817.057030360302,616.92453787901,646.86668947112,368.046608710028,164.858439817147,87.9946238183061,44.4538825186917,59.9187361163187,14.473305640901,38.4286635546538,571.127115076241,330.818902177313,462.046123480062,427.136251885074,204.860152851341,115.213122188831,34.928922966546,111.605682027183,107.410374479656,41.7771493882616,22.6131374307718,34.0189414275814,49.9039252106215,15.0791283939272,23.3879444042045,65.4046483115318,39.7348914678815,4.81651769963376,5.74337264301796,237.213865960049,48.9793598776484,255.561657727168,257.299132491485,169.538214015713,142.664372377674,113.850122456103,112.381382723166,166.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |||
|HGNC= | |||
|MCL_coexpression_id=154 | |||
|TSSclassifier=NA | |||
|UniProt=P62806 | |||
|association_with_transcript=-14bp_to_ENSMUST00000102971_5end | |||
|cluster_id=chr13:23643531..23643541,- | |||
|description=CAGE_peak_4_at_Hist1h4a_5end,CAGE_peak_4_at_Hist1h4c_5end,CAGE_peak_4_at_Hist1h4d_5end,CAGE_peak_4_at_Hist1h4f_5end,CAGE_peak_4_at_Hist1h4h_5end,CAGE_peak_4_at_Hist1h4i_5end,CAGE_peak_4_at_Hist1h4j_5end,CAGE_peak_4_at_Hist1h4k_5end,CAGE_peak_4_at_Hist1h4m_5end,CAGE_peak_4_at_Hist1h4n_5end,CAGE_peak_4_at_Hist4h4_5end,CAGE_peak_5_at_Hist1h4b_5end,CAGE_peak_5_at_Hist2h4_5end | |||
|id=chr13:23643531..23643541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=83.7578470358072,58.2788930757733,40.0399330662792,24.4996011158532,35.5635968261907,417.51574924487,321.684606100039,26.21203465864,5.06839399746,4.44722600011788,12.1564757440109,10.2108363514031,7.19043065711064,6.8187913886818,2259.48351439564,3238.38942663288,4743.72909558696,105.048901064293,103.93274067315,516.482206238203,40.8207792725135,487.91573420115,550.086755926598,135.513582106015,175.268690735318,187.773852265612,277.410725526444,201.034660095934,168.360749638347,284.037956239442,388.693585178749,6838.01029181331,6277.35122208812,3343.96346942576,1147.02978203231,1777.04835888228,1162.33614520167,1929.01228606641,3943.39948381162,2942.72696487672,1751.16513986833,2486.28556524874,1769.68523679855,28.7044744984316,27.4731483604884,27.8991063285756,219.069576417451,298.258413928451,37.7860234303292,35.1918117324453,152.44521315002,135.127410503073,49.4958687870322,48.5992635147601,30.5845357219642,47.3357362306142,47.2780175898949,13.4074743992135,123.210724663495,100.508286061686,136.273751753829,162.306530861114,211.652161474451,75.1416263929968,102.842101706965,100.1776962074,172.86926376912,202.867265209781,283.176331214452,323.744240119394,335.468313355454,94.8361268220628,86.5804680530325,459.340497056078,538.268165238415,432.95204849332,20.9220173898839,15.0671058940522,11.6740965274745,76.6259331712426,63.0349864420603,79.6997456951843,15.6342479440773,16.3201156909187,21.5445529365302,78.3712037359956,70.473981995556,68.5949960637106,10.7531194533121,59.7015324843606,28.1168554040627,24.0918685554788,2.03991400112325,4.85732872474035,12.9955283489534,4.48026887097336,149.432863020184,163.613109674935,276.15252289285,225.430648537597,96.4777425470261,53.8971205140135,5.09610479413291,35.5533351576666,462.424863599953,346.34293610446,382.682004876191,120.578176983327,48.1624463583739,9.79718117827843,396.41397166062,413.464119547888,278.814136182575,145.748793414386,93.4830221728853,36.9459778509246,7.91023896749996,11.8571472674328,770.49579074834,231.164828574848,605.76828513686,891.685590515673,109.971139118692,16.3957246326466,12.5668024088073,104.737392635522,1559.39384544455,2951.52143648757,1573.63769207283,8.38827580667007,18.3000241127451,54.1570257606446,17.3824320192276,11.5071955798649,10.1816141834184,15.0884374653015,178.728083557305,557.218821362607,29.3158399783063,10.7325346502102,386.978197371081,629.242059834415,393.435753624688,316.932231908509,232.480717600087,302.47649359253,288.413908194845,15.0047955028629,550.776221943412,324.31692748781,239.821382235462,288.899975339544,260.25222527516,150.444935937576,150.838305987023,290.390995288182,1737.27542541294,1439.60419239972,921.826392039303,220.796073522845,223.034283042022,211.392860155231,165.958059645232,168.036653912283,187.588809271052,127.428601723224,158.817853628575,96.3314074529148,80.3052067577785,55.8169377868924,12.4845966700618,12.7193989060039,32.9325172936576,27.1096965895951,15.5614561937454,36.0166143327495,10.2429822724977,136.985393531716,377.093626946294,320.022133823684,233.121237531667,168.204059535868,148.770911332218,131.826358896003,121.479439755395,72.7969379880128,94.7533737177016,89.9283253626002,59.4640465713316,79.9949273702257,105.691506388725,83.2410522203255,663.45831753388,380.447546990397,236.686244913469,286.537418278357,229.445792319301,107.728619351529,65.1968697751093,12.989693022205,24.9627977267786,22.5816809976895,7.11486305009157,664.544056067203,706.826146427078,791.73949770707,1044.5267650294,991.479303742186,1408.8448379066,817.057030360302,616.92453787901,646.86668947112,368.046608710028,164.858439817147,87.9946238183061,44.4538825186917,59.9187361163187,14.473305640901,38.4286635546538,571.127115076241,330.818902177313,462.046123480062,427.136251885074,204.860152851341,115.213122188831,34.928922966546,111.605682027183,107.410374479656,41.7771493882616,22.6131374307718,34.0189414275814,49.9039252106215,15.0791283939272,23.3879444042045,65.4046483115318,39.7348914678815,4.81651769963376,5.74337264301796,237.213865960049,48.9793598776484,255.561657727168,257.299132491485,169.538214015713,142.664372377674,113.850122456103,112.381382723166,166.377198388382,102.58180612687,84.9868722585026,14.1381379225595,41.4465048808144,293.274049239969,154.905498345251,28.044920905331,14.6019652173959,593.59865539893,415.090243712603,245.563813842179,197.261664444356,110.984088407758,48.8429474087938,146.140559249957,164.701788813741,78.0610792101465,34.7881408297496,51.5677716240934,14.2984634416591,348.598278044617,345.128968332389,210.478968401024,123.074122147738,177.833711149264,105.969569267766,181.156644723187,113.581106702836,13.5572525352845,9.48272111636336,42.7055395118433,80.409284494561,114.47393151364,141.098110611707,76.3255183814535,79.8657492365791,7.04616147639937,1432.75233548999,521.95238907899,663.922380620416,2600.99165432077,1541.91088869316,1561.18225396131,755.214164462699,735.72478486547,748.21465817715,1.90934123603023,344.173561016275,240.93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| |||
|short_description=p4@Hist1h4a,p4@Hist1h4c,p4@Hist1h4d,p4@Hist1h4f,p4@Hist1h4h,p4@Hist1h4i,p4@Hist1h4j,p4@Hist1h4k,p4@Hist1h4m,p4@Hist1h4n,p4@Hist4h4,p5@Hist1h4b,p5@Hist2h4 | |||
}} |
Latest revision as of 07:02, 27 September 2015
Short description: | p4@Hist1h4a, p4@Hist1h4c, p4@Hist1h4d, p4@Hist1h4f, p4@Hist1h4h, p4@Hist1h4i, p4@Hist1h4j, p4@Hist1h4k, p4@Hist1h4m, p4@Hist1h4n, p4@Hist4h4, p5@Hist1h4b, p5@Hist2h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hist1h4a_5end, CAGE_peak_4_at_Hist1h4c_5end, CAGE_peak_4_at_Hist1h4d_5end, CAGE_peak_4_at_Hist1h4f_5end, CAGE_peak_4_at_Hist1h4h_5end, CAGE_peak_4_at_Hist1h4i_5end, CAGE_peak_4_at_Hist1h4j_5end, CAGE_peak_4_at_Hist1h4k_5end, CAGE_peak_4_at_Hist1h4m_5end, CAGE_peak_4_at_Hist1h4n_5end, CAGE_peak_4_at_Hist4h4_5end, CAGE_peak_5_at_Hist1h4b_5end, CAGE_peak_5_at_Hist2h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:154 |
Association with transcript: | -14bp_to_ENSMUST00000102971_5end |
EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data