FFCP PHASE1:Mm9::chr1:64579145..64579168,+: Difference between revisions
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{{FFCP|EntrezGene=12912|HGNC=|MCL_coexpression_id=102|UniProt=Q01147,Q62347,Q543W0,Q547S9|association_with_transcript=-209bp_to_ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000171164,NM_001037726,NM_009952,NM_133828,uc007bgr.1,uc007bgs.1,uc007bgt.1_5end|description=CAGE_peak_6_at_Creb1_5end|id=chr1:64579145..64579168,+|ontology_enrichment_celltype=CL:0000988!1.44e-14!32;CL:0002032!1.44e-14!32;CL:0000037!1.44e-14!32;CL:0000566!1.44e-14!32;CL:0000837!1.44e-14!32;CL:0002031!1.52e-11!25;CL:0000838!3.42e-10!12;CL:0000791!3.87e-10!9;CL:0000789!3.87e-10!9;CL:0002420!3.87e-10!9;CL:0002419!3.87e-10!9;CL:0000790!3.87e-10!9;CL:0000063!9.81e-10!66;CL:0000084!3.11e-09!11;CL:0000827!3.11e-09!11;CL:0000624!3.89e-09!8;CL:0002320!4.25e-09!46;CL:0000134!4.25e-09!46;CL:0000542!4.42e-09!13;CL:0000051!4.42e-09!13;CL:0000738!8.29e-09!17;CL:0002087!8.29e-09!17;CL:0000893!3.65e-07!6;CL:0002489!3.65e-07!6;CL:0000898!3.65e-07!6;CL:0000809!3.65e-07!6;CL:0000810!3.65e-07!6;CL:0000895!3.65e-07!6;CL:0000808!3.65e-07!6;CL:0000894!3.65e-07!6;CL:0000806!3.65e-07!6;CL:0000807!3.65e-07!6;CL:0000805!3.65e-07!6;CL:0002425!3.65e-07!6;CL:0002436!3.65e-07!6;CL:0002427!3.65e-07!6;CL:0002428!3.65e-07!6;CL:0002429!3.65e-07!6;CL:0002433!3.65e-07!6;CL:0002431!3.65e-07!6;CL:0002432!3.65e-07!6;CL:0000219!4.76e-07!54;CL:0000049!4.90e-07!19|ontology_enrichment_celltype_v019_2=CL:0000791,1.45e-19,9;CL:0000789,1.45e-19,9;CL:0002420,1.45e-19,9;CL:0002419,1.45e-19,9;CL:0000790,1.45e-19,9;CL:0002031,4.18e-19,25;CL:0000988,5.28e-18,32;CL:0002032,5.28e-18,32;CL:0000037,5.28e-18,32;CL:0000837,5.28e-18,32;CL:0000838,1.32e-17,12;CL:0000624,1.85e-17,8;CL:0000738,1.06e-16,17;CL:0002087,1.06e-16,17;CL:0000542,4.57e-16,13;CL:0000051,4.57e-16,13;CL:0000084,1.24e-15,11;CL:0000827,1.24e-15,11;CL:0000893,2.47e-13,6;CL:0002489,2.47e-13,6;CL:0000898,2.47e-13,6;CL:0000809,2.47e-13,6;CL:0000810,2.47e-13,6;CL:0000895,2.47e-13,6;CL:0000808,2.47e-13,6;CL:0000894,2.47e-13,6;CL:0000806,2.47e-13,6;CL:0000807,2.47e-13,6;CL:0000805,2.47e-13,6;CL:0002425,2.47e-13,6;CL:0002436,2.47e-13,6;CL:0002427,2.47e-13,6;CL:0002428,2.47e-13,6;CL:0002429,2.47e-13,6;CL:0002433,2.47e-13,6;CL:0002431,2.47e-13,6;CL:0002432,2.47e-13,6;CL:0002320,1.38e-12,46;CL:0000134,1.38e-12,46;CL:0000219,5.33e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.08e-22!48;UBERON:0002390!5.56e-20!45;UBERON:0003061!5.56e-20!45;UBERON:0004177!8.69e-15!29;UBERON:0002405!4.76e-14!70;UBERON:0003408!1.20e-12!24;UBERON:0002370!4.26e-12!23;UBERON:0000974!4.26e-12!23;UBERON:0004807!4.26e-12!23;UBERON:0005058!4.26e-12!23;UBERON:0003351!4.26e-12!23;UBERON:0009113!4.26e-12!23;UBERON:0003295!4.26e-12!23;UBERON:0009722!4.26e-12!23;UBERON:0005562!4.26e-12!23;UBERON:0007690!4.26e-12!23;UBERON:0006562!2.74e-11!24;UBERON:0001557!2.74e-11!24;UBERON:0001042!2.74e-11!24;UBERON:0008814!2.74e-11!24;UBERON:0009145!2.74e-11!24;UBERON:0003081!6.62e-11!88;UBERON:0000072!2.98e-09!27;UBERON:0001004!3.62e-09!42;UBERON:0002384!4.25e-09!46;UBERON:0000065!1.06e-08!41;UBERON:0005057!2.53e-07!51;UBERON:0001474!9.95e-07!22;UBERON:0004765!9.95e-07!22;UBERON:0001434!9.95e-07!22;UBERON:0005911!9.99e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.29e-22,48;UBERON:0002405,8.29e-22,48;UBERON:0002390,7.05e-18,45;UBERON:0003061,7.05e-18,45;UBERON:0004177,1.33e-15,29;UBERON:0005057,1.33e-15,29;UBERON:0000077,5.25e-14,35;UBERON:0002384,1.38e-12,46;UBERON:0002370,1.16e-11,23;UBERON:0000974,1.16e-11,23;UBERON:0004807,1.16e-11,23;UBERON:0005058,1.16e-11,23;UBERON:0003351,1.16e-11,23;UBERON:0009113,1.16e-11,23;UBERON:0003295,1.16e-11,23;UBERON:0009722,1.16e-11,23;UBERON:0005562,1.16e-11,23;UBERON:0007690,1.16e-11,23;UBERON:0006562,4.73e-11,24;UBERON:0003408,4.73e-11,24;UBERON:0001557,4.73e-11,24;UBERON:0001042,4.73e-11,24;UBERON:0008814,4.73e-11,24;UBERON:0009145,4.73e-11,24;UBERON:0000072,1.69e-09,27;UBERON:0003081,2.43e-08,87;UBERON:0004923,1.36e-07,24;UBERON:0003929,1.70e-07,55|phase1_expression=0,2.09385244583617,2.72999543633722,0.30246421130683,0,3.86122325397347,2.10251376535973,7.48915275961142,16.3314917695933,16.8526458951835,1.71217968225505,3.66951931378547,10.2720437958723,9.00430144915673,0.666219523631325,1.01237633694913,0.699561878128147,5.99378114180652,5.75880621144103,4.2438965179803,0,0.496454756004426,0,1.91990907352088,1.14704640533585,0.57423196411502,2.58457197695445,1.939241094173,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,10.8804321301702,10.4189077734164,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,4.14300613835475,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,2.27648736561249,2.39961092397363,0.889491589511453,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.289298117163023,3.01582567878545,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0.412773735926445,0,1.13021074202815,3.55404992074665,2.0590035588587,4.75939603982795,2.37917468950219,2.48759952847963,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,1.02710957164827,0.77952493786677,0.537080087002444,0.198681354781265,1.20195449519969,1.03382669022204,1.00966449948148,1.295515713135,0.604957110821043,1.36441033035653,0.865906574762965,1.28564592399726,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0.463735671240843|short_description=p6@Creb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12912 | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt=Q01147,Q62347,Q543W0,Q547S9 | |||
|association_with_transcript=-209bp_to_ENSMUST00000049932,ENSMUST00000087366,ENSMUST00000171164,NM_001037726,NM_009952,NM_133828,uc007bgr.1,uc007bgs.1,uc007bgt.1_5end | |||
|cluster_id=chr1:64579145..64579168,+ | |||
|description=CAGE_peak_6_at_Creb1_5end | |||
|id=chr1:64579145..64579168,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.44e-14!32;CL:0002032!1.44e-14!32;CL:0000037!1.44e-14!32;CL:0000566!1.44e-14!32;CL:0000837!1.44e-14!32;CL:0002031!1.52e-11!25;CL:0000838!3.42e-10!12;CL:0000791!3.87e-10!9;CL:0000789!3.87e-10!9;CL:0002420!3.87e-10!9;CL:0002419!3.87e-10!9;CL:0000790!3.87e-10!9;CL:0000063!9.81e-10!66;CL:0000084!3.11e-09!11;CL:0000827!3.11e-09!11;CL:0000624!3.89e-09!8;CL:0002320!4.25e-09!46;CL:0000134!4.25e-09!46;CL:0000542!4.42e-09!13;CL:0000051!4.42e-09!13;CL:0000738!8.29e-09!17;CL:0002087!8.29e-09!17;CL:0000893!3.65e-07!6;CL:0002489!3.65e-07!6;CL:0000898!3.65e-07!6;CL:0000809!3.65e-07!6;CL:0000810!3.65e-07!6;CL:0000895!3.65e-07!6;CL:0000808!3.65e-07!6;CL:0000894!3.65e-07!6;CL:0000806!3.65e-07!6;CL:0000807!3.65e-07!6;CL:0000805!3.65e-07!6;CL:0002425!3.65e-07!6;CL:0002436!3.65e-07!6;CL:0002427!3.65e-07!6;CL:0002428!3.65e-07!6;CL:0002429!3.65e-07!6;CL:0002433!3.65e-07!6;CL:0002431!3.65e-07!6;CL:0002432!3.65e-07!6;CL:0000219!4.76e-07!54;CL:0000049!4.90e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.45e-19,9;CL:0000789,1.45e-19,9;CL:0002420,1.45e-19,9;CL:0002419,1.45e-19,9;CL:0000790,1.45e-19,9;CL:0002031,4.18e-19,25;CL:0000988,5.28e-18,32;CL:0002032,5.28e-18,32;CL:0000037,5.28e-18,32;CL:0000837,5.28e-18,32;CL:0000838,1.32e-17,12;CL:0000624,1.85e-17,8;CL:0000738,1.06e-16,17;CL:0002087,1.06e-16,17;CL:0000542,4.57e-16,13;CL:0000051,4.57e-16,13;CL:0000084,1.24e-15,11;CL:0000827,1.24e-15,11;CL:0000893,2.47e-13,6;CL:0002489,2.47e-13,6;CL:0000898,2.47e-13,6;CL:0000809,2.47e-13,6;CL:0000810,2.47e-13,6;CL:0000895,2.47e-13,6;CL:0000808,2.47e-13,6;CL:0000894,2.47e-13,6;CL:0000806,2.47e-13,6;CL:0000807,2.47e-13,6;CL:0000805,2.47e-13,6;CL:0002425,2.47e-13,6;CL:0002436,2.47e-13,6;CL:0002427,2.47e-13,6;CL:0002428,2.47e-13,6;CL:0002429,2.47e-13,6;CL:0002433,2.47e-13,6;CL:0002431,2.47e-13,6;CL:0002432,2.47e-13,6;CL:0002320,1.38e-12,46;CL:0000134,1.38e-12,46;CL:0000219,5.33e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.08e-22!48;UBERON:0002390!5.56e-20!45;UBERON:0003061!5.56e-20!45;UBERON:0004177!8.69e-15!29;UBERON:0002405!4.76e-14!70;UBERON:0003408!1.20e-12!24;UBERON:0002370!4.26e-12!23;UBERON:0000974!4.26e-12!23;UBERON:0004807!4.26e-12!23;UBERON:0005058!4.26e-12!23;UBERON:0003351!4.26e-12!23;UBERON:0009113!4.26e-12!23;UBERON:0003295!4.26e-12!23;UBERON:0009722!4.26e-12!23;UBERON:0005562!4.26e-12!23;UBERON:0007690!4.26e-12!23;UBERON:0006562!2.74e-11!24;UBERON:0001557!2.74e-11!24;UBERON:0001042!2.74e-11!24;UBERON:0008814!2.74e-11!24;UBERON:0009145!2.74e-11!24;UBERON:0003081!6.62e-11!88;UBERON:0000072!2.98e-09!27;UBERON:0001004!3.62e-09!42;UBERON:0002384!4.25e-09!46;UBERON:0000065!1.06e-08!41;UBERON:0005057!2.53e-07!51;UBERON:0001474!9.95e-07!22;UBERON:0004765!9.95e-07!22;UBERON:0001434!9.95e-07!22;UBERON:0005911!9.99e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.29e-22,48;UBERON:0002405,8.29e-22,48;UBERON:0002390,7.05e-18,45;UBERON:0003061,7.05e-18,45;UBERON:0004177,1.33e-15,29;UBERON:0005057,1.33e-15,29;UBERON:0000077,5.25e-14,35;UBERON:0002384,1.38e-12,46;UBERON:0002370,1.16e-11,23;UBERON:0000974,1.16e-11,23;UBERON:0004807,1.16e-11,23;UBERON:0005058,1.16e-11,23;UBERON:0003351,1.16e-11,23;UBERON:0009113,1.16e-11,23;UBERON:0003295,1.16e-11,23;UBERON:0009722,1.16e-11,23;UBERON:0005562,1.16e-11,23;UBERON:0007690,1.16e-11,23;UBERON:0006562,4.73e-11,24;UBERON:0003408,4.73e-11,24;UBERON:0001557,4.73e-11,24;UBERON:0001042,4.73e-11,24;UBERON:0008814,4.73e-11,24;UBERON:0009145,4.73e-11,24;UBERON:0000072,1.69e-09,27;UBERON:0003081,2.43e-08,87;UBERON:0004923,1.36e-07,24;UBERON:0003929,1.70e-07,55 | |||
|phase1_expression=0,2.09385244583617,2.72999543633722,0.30246421130683,0,3.86122325397347,2.10251376535973,7.48915275961142,16.3314917695933,16.8526458951835,1.71217968225505,3.66951931378547,10.2720437958723,9.00430144915673,0.666219523631325,1.01237633694913,0.699561878128147,5.99378114180652,5.75880621144103,4.2438965179803,0,0.496454756004426,0,1.91990907352088,1.14704640533585,0.57423196411502,2.58457197695445,1.939241094173,0,0,1.33038306393183,0,0,0,0,0,0,0,0,0,1.76469446409304,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,10.8804321301702,10.4189077734164,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,4.14300613835475,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0,0,0.510914110417183,2.27648736561249,2.39961092397363,0.889491589511453,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0,0.159454768657487,0.655453258862952,0.863424909329478,0.289298117163023,3.01582567878545,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.22132145037209,0.412773735926445,0,1.13021074202815,3.55404992074665,2.0590035588587,4.75939603982795,2.37917468950219,2.48759952847963,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0.948033361884535,0.202725215290164,1.02710957164827,0.77952493786677,0.537080087002444,0.198681354781265,1.20195449519969,1.03382669022204,1.00966449948148,1.295515713135,0.604957110821043,1.36441033035653,0.865906574762965,1.28564592399726,0,0,0,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0.463735671240843 | |||
|short_description=p6@Creb1 | |||
}} |
Latest revision as of 07:57, 27 September 2015
Short description: | p6@Creb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Creb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | -209bp_to_ENSMUST00000049932, ENSMUST00000087366, ENSMUST00000171164, NM_001037726, NM_009952, NM_133828, uc007bgr.1, uc007bgs.1, uc007bgt.1_5end |
EntrezGene: | Creb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.29e-22 | 48 |
immune system | 8.29e-22 | 48 |
hematopoietic system | 7.05e-18 | 45 |
blood island | 7.05e-18 | 45 |
hemopoietic organ | 1.33e-15 | 29 |
immune organ | 1.33e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 5.25e-14 | 35 |
connective tissue | 1.38e-12 | 46 |
thymus | 1.16e-11 | 23 |
neck | 1.16e-11 | 23 |
respiratory system epithelium | 1.16e-11 | 23 |
hemolymphoid system gland | 1.16e-11 | 23 |
pharyngeal epithelium | 1.16e-11 | 23 |
thymic region | 1.16e-11 | 23 |
pharyngeal gland | 1.16e-11 | 23 |
entire pharyngeal arch endoderm | 1.16e-11 | 23 |
thymus primordium | 1.16e-11 | 23 |
early pharyngeal endoderm | 1.16e-11 | 23 |
pharynx | 4.73e-11 | 24 |
gland of gut | 4.73e-11 | 24 |
upper respiratory tract | 4.73e-11 | 24 |
chordate pharynx | 4.73e-11 | 24 |
pharyngeal arch system | 4.73e-11 | 24 |
pharyngeal region of foregut | 4.73e-11 | 24 |
segment of respiratory tract | 1.69e-09 | 27 |
lateral plate mesoderm | 2.43e-08 | 87 |
organ component layer | 1.36e-07 | 24 |
gut epithelium | 1.70e-07 | 55 |