FFCP PHASE1:Mm9::chr18:4920507..4920584,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225115 | |EntrezGene=225115 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4L3,E9PVA9,Q8C9L0 | |UniProt=Q8K4L3,E9PVA9,Q8C9L0 | ||
|association_with_transcript=0bp_to_ENSMUST00000025079,ENSMUST00000055015,ENSMUST00000126977,ENSMUST00000131210,uc008dym.2,uc008dyn.2,uc008dyo.2_5end | |association_with_transcript=0bp_to_ENSMUST00000025079,ENSMUST00000055015,ENSMUST00000126977,ENSMUST00000131210,uc008dym.2,uc008dyn.2,uc008dyo.2_5end | ||
|cluster_id=chr18:4920507..4920584,+ | |||
|description=CAGE_peak_1_at_Svil_5end | |description=CAGE_peak_1_at_Svil_5end | ||
|id=chr18:4920507..4920584,+ | |id=chr18:4920507..4920584,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.57e-15!193;UBERON:0004120!2.57e-15!193;UBERON:0006603!2.57e-15!193;UBERON:0003104!2.52e-13!131;UBERON:0009142!2.52e-13!131;UBERON:0000464!1.26e-10!57;UBERON:0001048!5.77e-10!147;UBERON:0001041!7.62e-10!92;UBERON:0000077!1.46e-09!97;UBERON:0000466!1.83e-09!79;UBERON:0002048!3.82e-08!14;UBERON:0000117!3.82e-08!14;UBERON:0000171!3.82e-08!14;UBERON:0000170!3.82e-08!14;UBERON:0005597!3.82e-08!14;UBERON:0000118!3.82e-08!14;UBERON:0004921!2.59e-07!126;UBERON:0004185!2.59e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.26e-08,90;UBERON:0002048,3.82e-08,14;UBERON:0000117,3.82e-08,14;UBERON:0000171,3.82e-08,14;UBERON:0000170,3.82e-08,14;UBERON:0005597,3.82e-08,14;UBERON:0000118,3.82e-08,14;UBERON:0005177,7.17e-08,79;UBERON:0001048,1.66e-07,134;UBERON:0001041,1.96e-07,80 | |||
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|phase1_expression=34.5921509746355,12.563114675017,18.1999695755814,15.4256747766483,18.5331420080148,5.54001597309236,7.00837921786577,34.3468040354593,38.7168985917084,45.4085181064667,31.1616702170419,35.6581550709154,47.2514014610128,40.2133851127388,12.3250611871795,17.412872995525,15.3903613188192,14.0380663584416,19.3331351384092,19.0975343309114,21.6860389885228,0.992909512008853,1.82839852397255,6.71968175732308,5.96464130774642,13.2073351746455,12.0613358924541,7.75696437669201,6.27077284206034,7.05684363327806,8.20402889424627,9.52546010189447,7.99584223859941,0,7.79899373328441,6.64938581433969,7.75843553797003,241.074219304459,142.984368047855,182.709786646856,305.292142288096,285.51301271263,207.312920744303,23.1650145075062,23.9249557678054,10.6457116253775,12.5182615095686,9.15705656797875,7.46933021297204,7.38833616482277,21.2779360870551,7.18762821824858,8.72469551500229,36.9934692425786,39.6590682988108,17.2363822144084,36.1032134322833,22.6895720602075,2.83243045203437,2.11596391708813,7.60597684207415,13.8926258148344,13.3394219416671,6.74924787961049,2.96659908770092,10.6572017241915,8.38880309451533,8.06858441175265,6.73982480005105,5.40023753326763,4.83747411108179,6.56997264128748,9.27647871996777,4.40966877173835,4.69642807989358,3.67687514644008,5.50579404996943,3.95830748064082,3.68655679814984,3.03338461779446,3.20206752608434,3.64639359389732,2.23346399201105,2.8138130501584,5.04234217663473,15.6153150301044,9.5389026135399,10.0655700745662,4.54357159999104,15.2654551415707,52.175607966302,18.9293252935905,13.599426674155,14.5719861742211,31.1892680374881,21.5052905806721,16.1511083151515,7.32850387085648,7.27400812888033,4.59341446863442,11.2674735821344,12.8326477414318,10.1922095882658,21.3320010945999,12.5564803786504,14.6948721975557,13.1436355703844,15.6431915215112,29.7778566194247,44.2357574413178,27.7576522825817,34.7090645275841,25.5983201954225,26.2257394561563,32.4544831694545,26.6413173618912,15.5732829672656,40.7770186514151,73.4226758118396,35.1034064385878,36.6596920644253,34.911018225736,29.8226817948995,6.14839673724249,6.49284791121711,25.5457055208591,14.1381846916986,9.59844369589452,10.9280395282836,6.14141621559773,6.40500843946077,3.5183218591602,4.17178368461463,5.37002460393694,4.1557608911912,7.13861557498134,59.0668310331834,43.6668466841426,34.3702951469798,8.62811609134543,19.2578255584801,18.8519725635448,25.0286360429435,31.4973069276644,23.6086652055108,22.8042422107033,18.9277483610652,19.4027528054262,20.6945273215529,45.9527774807801,62.6386002023658,47.5654739367837,78.4093242816186,57.4616074761575,62.9693337408307,39.2097505632432,7.02213187313235,8.74982884190032,11.3665399758237,28.1691050648283,30.2538617375614,25.9289368503861,35.2749656021963,31.0887486160898,34.247299060998,27.9040733700489,33.2659017735528,26.9727940868162,26.0004562863299,28.5651387497626,21.888578577381,18.8597983778679,22.1745616443961,26.4386644957932,5.04695876553905,7.71784592844633,34.363553430315,19.3048913664387,32.2065258308203,46.9118077158086,44.3304066948001,37.9165026291884,35.5804870151793,33.8601614480355,26.5736274464927,26.5165317105658,32.4222419352348,34.4194696631191,37.0431765526328,40.44687338944,17.5071820398502,19.515844778928,18.0184505905428,36.7880210603327,34.9393980586549,40.7302655690629,38.2086399720223,30.7896249318498,43.000845244495,24.503284564614,25.2767951824613,18.6329717521919,19.2694207606647,25.1936109631302,28.5010542914144,21.3619006765611,29.8204378441099,34.729511004348,37.4300002118687,37.6881940060562,18.6455510791291,24.4359657737393,35.9420516318386,34.9812490808393,39.3167468124346,33.845569644913,23.5010611713705,24.6046195895317,55.4259570499814,30.3186258832776,47.4228081446295,45.4916829877504,53.27468636149,78.8954472550952,86.885928923395,75.1264544252525,74.5614231622283,67.5467303428764,63.1440883883649,57.516023465224,59.2309487800022,60.0293593113273,7.53956419696361,11.4220193601929,17.7035138286853,20.1433824802455,5.61927064957272,8.43924143463863,9.01642199571715,19.9452032491455,8.83423014365519,3.51394869866975,9.04778270477756,9.79772071605463,16.932699230262,20.9476632783736,6.8817819284732,6.13737301613755,5.92931666919785,18.315315036043,43.0078458181054,41.4892856544705,48.8660878060728,88.7539261592241,43.8058956521877,33.5037277893874,33.8602383800521,33.5717041965499,32.1879063240042,40.8888746765424,39.5395288547378,49.0770534794632,42.0666906493971,40.4527050157844,42.1674434299995,43.3169281642385,11.9153862013826,26.4689808226026,27.424040961944,28.935499729265,30.1478397191865,31.9280183507706,33.7325492234348,19.790221692449,15.9576761483323,8.47328283455281,9.2621927183084,32.8123643353545,50.6998299825143,37.152761755744,28.1718731847402,33.6488844477376,23.0269860937582,7.04616147639937,27.3393409276564,46.6434321596883,32.779431344439,28.632005464713,23.9214898511794,24.0217081866849,12.7483822495391,12.1757763521582,16.307596908922,13.3653886522116,35.4296312810872,70.958494027270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| ||
|short_description=p1@Svil | |short_description=p1@Svil | ||
}} | }} |
Latest revision as of 08:30, 27 September 2015
Short description: | p1@Svil |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Svil_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000025079, ENSMUST00000055015, ENSMUST00000126977, ENSMUST00000131210, uc008dym.2, uc008dyn.2, uc008dyo.2_5end |
EntrezGene: | Svil |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 2.26e-08 | 90 |
lung | 3.82e-08 | 14 |
respiratory tube | 3.82e-08 | 14 |
respiration organ | 3.82e-08 | 14 |
pair of lungs | 3.82e-08 | 14 |
lung primordium | 3.82e-08 | 14 |
lung bud | 3.82e-08 | 14 |
trunk region element | 7.17e-08 | 79 |
primordium | 1.66e-07 | 134 |
foregut | 1.96e-07 | 80 |