FFCP PHASE1:Mm9::chr8:108804865..108804908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58994 | |EntrezGene=58994 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JJY3 | |UniProt=Q9JJY3 | ||
|association_with_transcript=0bp_to_uc009nfx.1_5end | |association_with_transcript=0bp_to_uc009nfx.1_5end | ||
|cluster_id=chr8:108804865..108804908,- | |||
|description=CAGE_peak_2_at_Smpd3_5end | |description=CAGE_peak_2_at_Smpd3_5end | ||
|id=chr8:108804865..108804908,- | |id=chr8:108804865..108804908,- | ||
|ontology_enrichment_celltype=CL:0002563!1.29e-08!9;CL:0002251!1.29e-08!9;CL:0000066!2.02e-08!25;CL:0000223!1.30e-07!20 | |ontology_enrichment_celltype=CL:0002563!1.29e-08!9;CL:0002251!1.29e-08!9;CL:0000066!2.02e-08!25;CL:0000223!1.30e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.74e-13,9;CL:0002251,9.74e-13,9;CL:0000066,6.50e-10,25;CL:0000239,2.65e-09,6;CL:0000677,2.65e-09,6;CL:0000584,2.65e-09,6;CL:0000223,4.50e-08,20;CL:0000075,8.36e-08,7;CL:0002076,9.94e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.70e-17!59;UBERON:0004119!1.75e-15!130;UBERON:0000925!1.75e-15!130;UBERON:0006595!1.75e-15!130;UBERON:0000160!2.80e-15!43;UBERON:0001007!9.07e-15!128;UBERON:0001555!9.07e-15!128;UBERON:0007026!9.07e-15!128;UBERON:0000344!5.17e-14!15;UBERON:0004921!1.70e-13!126;UBERON:0004185!1.70e-13!126;UBERON:0001242!2.94e-12!13;UBERON:0000060!2.94e-12!13;UBERON:0001262!2.94e-12!13;UBERON:0004786!2.94e-12!13;UBERON:0004923!2.04e-09!24;UBERON:0003350!1.29e-08!9;UBERON:0004808!1.29e-08!9;UBERON:0001277!1.29e-08!9;UBERON:0009854!3.84e-07!23;UBERON:0009856!3.84e-07!23 | |ontology_enrichment_uberon=UBERON:0005409!1.70e-17!59;UBERON:0004119!1.75e-15!130;UBERON:0000925!1.75e-15!130;UBERON:0006595!1.75e-15!130;UBERON:0000160!2.80e-15!43;UBERON:0001007!9.07e-15!128;UBERON:0001555!9.07e-15!128;UBERON:0007026!9.07e-15!128;UBERON:0000344!5.17e-14!15;UBERON:0004921!1.70e-13!126;UBERON:0004185!1.70e-13!126;UBERON:0001242!2.94e-12!13;UBERON:0000060!2.94e-12!13;UBERON:0001262!2.94e-12!13;UBERON:0004786!2.94e-12!13;UBERON:0004923!2.04e-09!24;UBERON:0003350!1.29e-08!9;UBERON:0004808!1.29e-08!9;UBERON:0001277!1.29e-08!9;UBERON:0009854!3.84e-07!23;UBERON:0009856!3.84e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.85e-37,47;UBERON:0000160,3.25e-35,31;UBERON:0000344,2.73e-21,15;UBERON:0001007,1.65e-18,116;UBERON:0001555,1.65e-18,116;UBERON:0007026,1.65e-18,116;UBERON:0001242,1.67e-18,13;UBERON:0001262,1.67e-18,13;UBERON:0004786,1.67e-18,13;UBERON:0004119,5.89e-18,118;UBERON:0000925,5.89e-18,118;UBERON:0006595,5.89e-18,118;UBERON:0004921,1.17e-16,114;UBERON:0004923,3.28e-13,24;UBERON:0003350,9.74e-13,9;UBERON:0004808,9.74e-13,9;UBERON:0001277,9.74e-13,9;UBERON:0000485,5.43e-10,11;UBERON:0002108,3.52e-07,4 | |||
|phase1_expression=0,62.4665979674456,58.2399026418606,67.4495191214231,65.6173406229715,41.9698179779724,37.8452477764752,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,67.8367872644044,62.8581430124046,50.5324128421218,58.1528694814751,55.1606355675876,96.9119439227507,117.698070597888,86.0314381342582,0,0,0,28.5963103553762,31.0858786820381,28.9920485892564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,2.03991400112325,0.539703191637817,13.6453047664011,29.1217476613268,5.61777680527007,0,0,0,0,0,0,0,0.649473123033642,0.760079596425296,0,11.3042040921869,0,0,0.173485326766136,0,0,0,0.117588707135705,0,16.8092578059374,0,0,0.485300549842228,0.662524555381181,1.45462575940567,76.4206220994301,0,0,105.759220856357,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,62.118731200954,102.871270432119,0,0.696710015581316,8.63411990858025,12.1010114774006,12.008414367623,14.6473732106671,65.0104814315981,11.1995289212327,15.3314477368164,10.9426059622633,14.0374142725766,85.387843822151,67.867347660654,54.763850144951,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0.405720242777006,0,0.763877555344259,0,1.13494658742525,0.549122826376163,1.43768206527355,2.23284568601102,0.312037673114561,1.76805214562978,2.51156378930677,3.37710464954357,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.824850614862677,0,0,0.302323556964751,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0.847328283455281,0,0,0,0.0603129249281559,0,0.492422699235184,41.098797964809,0,0,0,0,0,0,0,0,0,0,30.5494597764836,0.158167996790568,2.43983360552218,6.15630442684267,11.2907679847813,18.1240927909327,16.0488572197937,14.1337409290324,13.8730649251536,26.4414545515257,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.487289403698762,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0.563047426353546,13.3700685715104,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.735374033800057,0.666740183404846,1.64828045791115,1.92551525755089,0.758091635291392,1.01391719956096,1.32038438970253,0.749132059759059,0.768301828858431,1.26358031702349,0.952587382566147,1.0429589335037,0.964546102318525,0.412085900803307,0.883193520806384,0,0.887379030796687,0.953744759789284,0.145346416632329,0.658765662907314,1.60767754994185,1.28049581010941,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.985044823755635,0,2.32405261778949,0.964533054905707,0,1.16965804222704,0.859484216193193,0.956441660344217,0,0.463735671240843 | |phase1_expression=0,62.4665979674456,58.2399026418606,67.4495191214231,65.6173406229715,41.9698179779724,37.8452477764752,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,67.8367872644044,62.8581430124046,50.5324128421218,58.1528694814751,55.1606355675876,96.9119439227507,117.698070597888,86.0314381342582,0,0,0,28.5963103553762,31.0858786820381,28.9920485892564,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,1.72084775396277,2.03991400112325,0.539703191637817,13.6453047664011,29.1217476613268,5.61777680527007,0,0,0,0,0,0,0,0.649473123033642,0.760079596425296,0,11.3042040921869,0,0,0.173485326766136,0,0,0,0.117588707135705,0,16.8092578059374,0,0,0.485300549842228,0.662524555381181,1.45462575940567,76.4206220994301,0,0,105.759220856357,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,62.118731200954,102.871270432119,0,0.696710015581316,8.63411990858025,12.1010114774006,12.008414367623,14.6473732106671,65.0104814315981,11.1995289212327,15.3314477368164,10.9426059622633,14.0374142725766,85.387843822151,67.867347660654,54.763850144951,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0.405720242777006,0,0.763877555344259,0,1.13494658742525,0.549122826376163,1.43768206527355,2.23284568601102,0.312037673114561,1.76805214562978,2.51156378930677,3.37710464954357,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.824850614862677,0,0,0.302323556964751,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.704015124191131,0.847328283455281,0,0,0,0.0603129249281559,0,0.492422699235184,41.098797964809,0,0,0,0,0,0,0,0,0,0,30.5494597764836,0.158167996790568,2.43983360552218,6.15630442684267,11.2907679847813,18.1240927909327,16.0488572197937,14.1337409290324,13.8730649251536,26.4414545515257,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.487289403698762,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0,0.563047426353546,13.3700685715104,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.735374033800057,0.666740183404846,1.64828045791115,1.92551525755089,0.758091635291392,1.01391719956096,1.32038438970253,0.749132059759059,0.768301828858431,1.26358031702349,0.952587382566147,1.0429589335037,0.964546102318525,0.412085900803307,0.883193520806384,0,0.887379030796687,0.953744759789284,0.145346416632329,0.658765662907314,1.60767754994185,1.28049581010941,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,0.985044823755635,0,2.32405261778949,0.964533054905707,0,1.16965804222704,0.859484216193193,0.956441660344217,0,0.463735671240843 | ||
|short_description=p2@Smpd3 | |short_description=p2@Smpd3 | ||
}} | }} |
Latest revision as of 08:38, 27 September 2015
Short description: | p2@Smpd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smpd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_uc009nfx.1_5end |
EntrezGene: | Smpd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.74e-13 | 9 |
epithelial cell of alimentary canal | 9.74e-13 | 9 |
epithelial cell | 6.50e-10 | 25 |
brush border epithelial cell | 2.65e-09 | 6 |
gut absorptive cell | 2.65e-09 | 6 |
enterocyte | 2.65e-09 | 6 |
endodermal cell | 4.50e-08 | 20 |
columnar/cuboidal epithelial cell | 8.36e-08 | 7 |
endo-epithelial cell | 9.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.85e-37 | 47 |
intestine | 3.25e-35 | 31 |
mucosa | 2.73e-21 | 15 |
digestive system | 1.65e-18 | 116 |
digestive tract | 1.65e-18 | 116 |
primitive gut | 1.65e-18 | 116 |
intestinal mucosa | 1.67e-18 | 13 |
wall of intestine | 1.67e-18 | 13 |
gastrointestinal system mucosa | 1.67e-18 | 13 |
endoderm-derived structure | 5.89e-18 | 118 |
endoderm | 5.89e-18 | 118 |
presumptive endoderm | 5.89e-18 | 118 |
subdivision of digestive tract | 1.17e-16 | 114 |
organ component layer | 3.28e-13 | 24 |
epithelium of mucosa | 9.74e-13 | 9 |
gastrointestinal system epithelium | 9.74e-13 | 9 |
intestinal epithelium | 9.74e-13 | 9 |
simple columnar epithelium | 5.43e-10 | 11 |
small intestine | 3.52e-07 | 4 |