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FFCP PHASE1:Mm9::chrX:108009734..108009752,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18994
|EntrezGene=18994
|HGNC=
|HGNC=
|MCL_coexpression_id=1857
|MCL_coexpression_id=1857
|TSSclassifier=NA
|UniProt=P62515
|UniProt=P62515
|association_with_transcript=5bp_to_ENSMUST00000078229_5end
|association_with_transcript=5bp_to_ENSMUST00000078229_5end
|cluster_id=chrX:108009734..108009752,+
|description=CAGE_peak_2_at_Pou3f4_5end
|description=CAGE_peak_2_at_Pou3f4_5end
|id=chrX:108009734..108009752,+
|id=chrX:108009734..108009752,+
|ontology_enrichment_celltype=CL:0000221!1.11e-22!44;CL:0000133!1.11e-22!44;CL:0002319!2.56e-22!43;CL:0000540!5.16e-21!33;CL:0000047!5.16e-21!33;CL:0000031!5.16e-21!33;CL:0000404!5.16e-21!33;CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000055!9.66e-17!50;CL:0000393!1.59e-15!39;CL:0000211!1.59e-15!39;CL:0002321!9.76e-09!70;CL:0000220!9.76e-09!70
|ontology_enrichment_celltype=CL:0000221!1.11e-22!44;CL:0000133!1.11e-22!44;CL:0002319!2.56e-22!43;CL:0000540!5.16e-21!33;CL:0000047!5.16e-21!33;CL:0000031!5.16e-21!33;CL:0000404!5.16e-21!33;CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000055!9.66e-17!50;CL:0000393!1.59e-15!39;CL:0000211!1.59e-15!39;CL:0002321!9.76e-09!70;CL:0000220!9.76e-09!70
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-26,23;CL:0000337,1.87e-26,23;CL:0002319,2.78e-25,43;CL:0000221,1.88e-24,44;CL:0000133,1.88e-24,44;CL:0000540,2.07e-24,33;CL:0000047,2.07e-24,33;CL:0000031,2.07e-24,33;CL:0000404,2.07e-24,33;CL:0000393,3.40e-19,39;CL:0000211,3.40e-19,39;CL:0002321,2.00e-11,70;CL:0002609,1.27e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.26e-35!75;UBERON:0001016!9.26e-35!75;UBERON:0001049!1.86e-23!52;UBERON:0005068!1.86e-23!52;UBERON:0006241!1.86e-23!52;UBERON:0007135!1.86e-23!52;UBERON:0000955!3.59e-22!50;UBERON:0006238!3.59e-22!50;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0002616!2.31e-21!49;UBERON:0003080!4.84e-19!40;UBERON:0002780!2.87e-18!39;UBERON:0001890!2.87e-18!39;UBERON:0006240!2.87e-18!39;UBERON:0002020!7.23e-17!34;UBERON:0000033!1.51e-16!63;UBERON:0002346!5.08e-16!71;UBERON:0003075!5.08e-16!71;UBERON:0007284!5.08e-16!71;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0003056!2.41e-13!49;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0000153!1.57e-07!94;UBERON:0007811!1.64e-07!86;UBERON:0002420!3.47e-07!8;UBERON:0007245!3.47e-07!8;UBERON:0010009!3.47e-07!8;UBERON:0010011!3.47e-07!8;UBERON:0000454!3.47e-07!8
|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.26e-35!75;UBERON:0001016!9.26e-35!75;UBERON:0001049!1.86e-23!52;UBERON:0005068!1.86e-23!52;UBERON:0006241!1.86e-23!52;UBERON:0007135!1.86e-23!52;UBERON:0000955!3.59e-22!50;UBERON:0006238!3.59e-22!50;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0002616!2.31e-21!49;UBERON:0003080!4.84e-19!40;UBERON:0002780!2.87e-18!39;UBERON:0001890!2.87e-18!39;UBERON:0006240!2.87e-18!39;UBERON:0002020!7.23e-17!34;UBERON:0000033!1.51e-16!63;UBERON:0002346!5.08e-16!71;UBERON:0003075!5.08e-16!71;UBERON:0007284!5.08e-16!71;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0003056!2.41e-13!49;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0000153!1.57e-07!94;UBERON:0007811!1.64e-07!86;UBERON:0002420!3.47e-07!8;UBERON:0007245!3.47e-07!8;UBERON:0010009!3.47e-07!8;UBERON:0010011!3.47e-07!8;UBERON:0000454!3.47e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.21e-41,73;UBERON:0001016,1.16e-39,75;UBERON:0000073,1.04e-32,54;UBERON:0001049,1.28e-30,52;UBERON:0005068,1.28e-30,52;UBERON:0006241,1.28e-30,52;UBERON:0007135,1.28e-30,52;UBERON:0004121,1.04e-27,95;UBERON:0000924,1.04e-27,95;UBERON:0006601,1.04e-27,95;UBERON:0000955,1.09e-25,47;UBERON:0006238,1.09e-25,47;UBERON:0002616,1.51e-24,46;UBERON:0003080,2.85e-24,40;UBERON:0002346,1.04e-23,64;UBERON:0003075,1.04e-23,64;UBERON:0007284,1.04e-23,64;UBERON:0002780,3.77e-23,39;UBERON:0001890,3.77e-23,39;UBERON:0006240,3.77e-23,39;UBERON:0002020,1.08e-21,34;UBERON:0010371,1.13e-20,73;UBERON:0003056,6.75e-18,49;UBERON:0003528,6.63e-17,29;UBERON:0002791,6.63e-17,29;UBERON:0001893,6.63e-17,29;UBERON:0010314,1.08e-13,92;UBERON:0002420,4.95e-10,8;UBERON:0007245,4.95e-10,8;UBERON:0010009,4.95e-10,8;UBERON:0010011,4.95e-10,8;UBERON:0000454,4.95e-10,8;UBERON:0000956,3.86e-09,21;UBERON:0001869,3.86e-09,21;UBERON:0000203,3.86e-09,21;UBERON:0001954,9.86e-08,7;UBERON:0003022,9.86e-08,7;UBERON:0002421,9.86e-08,7;UBERON:0000349,9.86e-08,7;UBERON:0002600,9.86e-08,7;UBERON:0000369,1.08e-07,5;UBERON:0002435,1.08e-07,5;UBERON:0000204,1.08e-07,5;UBERON:0010082,1.08e-07,5;UBERON:0000025,2.54e-07,114;UBERON:0002240,3.26e-07,6;UBERON:0005174,3.26e-07,6;UBERON:0001137,3.26e-07,6;UBERON:0001894,3.81e-07,10;UBERON:0006222,3.81e-07,10;UBERON:0004111,7.89e-07,122;UBERON:0003076,8.68e-07,12;UBERON:0003057,8.68e-07,12
|phase1_expression=29.9478344085965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.31811709640683,1.1665793944457,1.39986421625363,1.43752564364972,0,0,0,0,0,0,12.5436205732951,12.6957835025288,6.97214543856797,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,3.00699875694585,4.45519596494579,3.15487442027073,2.28520787523043,1.98781686856452,13.5964787128599,13.801747826626,10.1114066527102,3.30347642998166,1.78762273319263,2.76491759861238,7.51751840062105,7.04454855738554,8.33461392890816,1.3959149950069,1.68828783009504,3.20876320331301,3.24091444021034,1.85083185038834,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,3.89455662452539,6.40500843946077,8.04187853522332,2.43354048269187,2.30143911597297,4.36354893575076,3.73154905055843,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0.238968797952552,1.11399337041197,1.69845918473299,0.809621403349789,1.16902343164525,0.395287777946524,4.4984984299053,0,0,0,0,0,1.21390318077491,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,3.78128297465751,7.1147276080515,2.14337035031592,3.19212420556092,1.60531935841864,1.64549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,1.20297227640581,0,0,2.02506750069542,0.900642406448441,0.453142408984205,1.03552062350364,6.01966615988225,7.98049746802062,2.04880326904961,0.729320151204882,1.46729213839588,1.10306105070008,1.55572709461131,0.618105171716683,2.24643446714271,0.252697211763798,1.52087579934144,0.565879024158229,0.749132059759059,0.704276676453562,0.918967503289812,1.42888107384922,0.347652977834566,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,1.66905332963125,1.30811774969096,1.03520318456864,0.676916863133412,0.548783918618318,0.526139422875686,0.950628796921032,1.68342681497322,0.711810108745045,1.18205378850676,1.22769312950907,0.464810523557898,0.578719832943424,2.49810577937946,0.935726433781634,0.429742108096597,0,0,0
|phase1_expression=29.9478344085965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.31811709640683,1.1665793944457,1.39986421625363,1.43752564364972,0,0,0,0,0,0,12.5436205732951,12.6957835025288,6.97214543856797,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,3.00699875694585,4.45519596494579,3.15487442027073,2.28520787523043,1.98781686856452,13.5964787128599,13.801747826626,10.1114066527102,3.30347642998166,1.78762273319263,2.76491759861238,7.51751840062105,7.04454855738554,8.33461392890816,1.3959149950069,1.68828783009504,3.20876320331301,3.24091444021034,1.85083185038834,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,3.89455662452539,6.40500843946077,8.04187853522332,2.43354048269187,2.30143911597297,4.36354893575076,3.73154905055843,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0.238968797952552,1.11399337041197,1.69845918473299,0.809621403349789,1.16902343164525,0.395287777946524,4.4984984299053,0,0,0,0,0,1.21390318077491,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,3.78128297465751,7.1147276080515,2.14337035031592,3.19212420556092,1.60531935841864,1.64549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,1.20297227640581,0,0,2.02506750069542,0.900642406448441,0.453142408984205,1.03552062350364,6.01966615988225,7.98049746802062,2.04880326904961,0.729320151204882,1.46729213839588,1.10306105070008,1.55572709461131,0.618105171716683,2.24643446714271,0.252697211763798,1.52087579934144,0.565879024158229,0.749132059759059,0.704276676453562,0.918967503289812,1.42888107384922,0.347652977834566,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,1.66905332963125,1.30811774969096,1.03520318456864,0.676916863133412,0.548783918618318,0.526139422875686,0.950628796921032,1.68342681497322,0.711810108745045,1.18205378850676,1.22769312950907,0.464810523557898,0.578719832943424,2.49810577937946,0.935726433781634,0.429742108096597,0,0,0
|short_description=p2@Pou3f4
|short_description=p2@Pou3f4
}}
}}

Latest revision as of 13:06, 1 October 2015

Short description:p2@Pou3f4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Pou3f4_5end
Coexpression cluster:MCL_coexpression_mm9:1857
Association with transcript: 5bp_to_ENSMUST00000078229_5end
EntrezGene:Pou3f4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Pou3f4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.80
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I86.02
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.21e-4173
nervous system1.16e-3975
regional part of nervous system1.04e-3254
neural tube1.28e-3052
neural rod1.28e-3052
future spinal cord1.28e-3052
neural keel1.28e-3052
ectoderm-derived structure1.04e-2795
ectoderm1.04e-2795
presumptive ectoderm1.04e-2795
brain1.09e-2547
future brain1.09e-2547
regional part of brain1.51e-2446
anterior neural tube2.85e-2440
neurectoderm1.04e-2364
neural plate1.04e-2364
presumptive neural plate1.04e-2364
regional part of forebrain3.77e-2339
forebrain3.77e-2339
future forebrain3.77e-2339
gray matter1.08e-2134
ecto-epithelium1.13e-2073
pre-chordal neural plate6.75e-1849
brain grey matter6.63e-1729
regional part of telencephalon6.63e-1729
telencephalon6.63e-1729
structure with developmental contribution from neural crest1.08e-1392
basal ganglion4.95e-108
nuclear complex of neuraxis4.95e-108
aggregate regional part of brain4.95e-108
collection of basal ganglia4.95e-108
cerebral subcortex4.95e-108
cerebral cortex3.86e-0921
cerebral hemisphere3.86e-0921
pallium3.86e-0921
Ammon's horn9.86e-087
lobe parts of cerebral cortex9.86e-087
hippocampal formation9.86e-087
limbic system9.86e-087
limbic lobe9.86e-087
corpus striatum1.08e-075
striatum1.08e-075
ventral part of telencephalon1.08e-075
future corpus striatum1.08e-075
tube2.54e-07114
spinal cord3.26e-076
dorsal region element3.26e-076
dorsum3.26e-076
diencephalon3.81e-0710
future diencephalon3.81e-0710
anatomical conduit7.89e-07122
posterior neural tube8.68e-0712
chordal neural plate8.68e-0712
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