FFCP PHASE1:Mm9::chrX:108009734..108009752,+: Difference between revisions
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{{FFCP|EntrezGene=18994|HGNC=|MCL_coexpression_id=1857|UniProt=P62515|association_with_transcript=5bp_to_ENSMUST00000078229_5end|description=CAGE_peak_2_at_Pou3f4_5end|id=chrX:108009734..108009752,+|ontology_enrichment_celltype=CL:0000221!1.11e-22!44;CL:0000133!1.11e-22!44;CL:0002319!2.56e-22!43;CL:0000540!5.16e-21!33;CL:0000047!5.16e-21!33;CL:0000031!5.16e-21!33;CL:0000404!5.16e-21!33;CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000055!9.66e-17!50;CL:0000393!1.59e-15!39;CL:0000211!1.59e-15!39;CL:0002321!9.76e-09!70;CL:0000220!9.76e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-26,23;CL:0000337,1.87e-26,23;CL:0002319,2.78e-25,43;CL:0000221,1.88e-24,44;CL:0000133,1.88e-24,44;CL:0000540,2.07e-24,33;CL:0000047,2.07e-24,33;CL:0000031,2.07e-24,33;CL:0000404,2.07e-24,33;CL:0000393,3.40e-19,39;CL:0000211,3.40e-19,39;CL:0002321,2.00e-11,70;CL:0002609,1.27e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.26e-35!75;UBERON:0001016!9.26e-35!75;UBERON:0001049!1.86e-23!52;UBERON:0005068!1.86e-23!52;UBERON:0006241!1.86e-23!52;UBERON:0007135!1.86e-23!52;UBERON:0000955!3.59e-22!50;UBERON:0006238!3.59e-22!50;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0002616!2.31e-21!49;UBERON:0003080!4.84e-19!40;UBERON:0002780!2.87e-18!39;UBERON:0001890!2.87e-18!39;UBERON:0006240!2.87e-18!39;UBERON:0002020!7.23e-17!34;UBERON:0000033!1.51e-16!63;UBERON:0002346!5.08e-16!71;UBERON:0003075!5.08e-16!71;UBERON:0007284!5.08e-16!71;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0003056!2.41e-13!49;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0000153!1.57e-07!94;UBERON:0007811!1.64e-07!86;UBERON:0002420!3.47e-07!8;UBERON:0007245!3.47e-07!8;UBERON:0010009!3.47e-07!8;UBERON:0010011!3.47e-07!8;UBERON:0000454!3.47e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.21e-41,73;UBERON:0001016,1.16e-39,75;UBERON:0000073,1.04e-32,54;UBERON:0001049,1.28e-30,52;UBERON:0005068,1.28e-30,52;UBERON:0006241,1.28e-30,52;UBERON:0007135,1.28e-30,52;UBERON:0004121,1.04e-27,95;UBERON:0000924,1.04e-27,95;UBERON:0006601,1.04e-27,95;UBERON:0000955,1.09e-25,47;UBERON:0006238,1.09e-25,47;UBERON:0002616,1.51e-24,46;UBERON:0003080,2.85e-24,40;UBERON:0002346,1.04e-23,64;UBERON:0003075,1.04e-23,64;UBERON:0007284,1.04e-23,64;UBERON:0002780,3.77e-23,39;UBERON:0001890,3.77e-23,39;UBERON:0006240,3.77e-23,39;UBERON:0002020,1.08e-21,34;UBERON:0010371,1.13e-20,73;UBERON:0003056,6.75e-18,49;UBERON:0003528,6.63e-17,29;UBERON:0002791,6.63e-17,29;UBERON:0001893,6.63e-17,29;UBERON:0010314,1.08e-13,92;UBERON:0002420,4.95e-10,8;UBERON:0007245,4.95e-10,8;UBERON:0010009,4.95e-10,8;UBERON:0010011,4.95e-10,8;UBERON:0000454,4.95e-10,8;UBERON:0000956,3.86e-09,21;UBERON:0001869,3.86e-09,21;UBERON:0000203,3.86e-09,21;UBERON:0001954,9.86e-08,7;UBERON:0003022,9.86e-08,7;UBERON:0002421,9.86e-08,7;UBERON:0000349,9.86e-08,7;UBERON:0002600,9.86e-08,7;UBERON:0000369,1.08e-07,5;UBERON:0002435,1.08e-07,5;UBERON:0000204,1.08e-07,5;UBERON:0010082,1.08e-07,5;UBERON:0000025,2.54e-07,114;UBERON:0002240,3.26e-07,6;UBERON:0005174,3.26e-07,6;UBERON:0001137,3.26e-07,6;UBERON:0001894,3.81e-07,10;UBERON:0006222,3.81e-07,10;UBERON:0004111,7.89e-07,122;UBERON:0003076,8.68e-07,12;UBERON:0003057,8.68e-07,12|phase1_expression=29.9478344085965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.31811709640683,1.1665793944457,1.39986421625363,1.43752564364972,0,0,0,0,0,0,12.5436205732951,12.6957835025288,6.97214543856797,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,3.00699875694585,4.45519596494579,3.15487442027073,2.28520787523043,1.98781686856452,13.5964787128599,13.801747826626,10.1114066527102,3.30347642998166,1.78762273319263,2.76491759861238,7.51751840062105,7.04454855738554,8.33461392890816,1.3959149950069,1.68828783009504,3.20876320331301,3.24091444021034,1.85083185038834,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,3.89455662452539,6.40500843946077,8.04187853522332,2.43354048269187,2.30143911597297,4.36354893575076,3.73154905055843,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92660707985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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18994 | |||
|HGNC= | |||
|MCL_coexpression_id=1857 | |||
|TSSclassifier=NA | |||
|UniProt=P62515 | |||
|association_with_transcript=5bp_to_ENSMUST00000078229_5end | |||
|cluster_id=chrX:108009734..108009752,+ | |||
|description=CAGE_peak_2_at_Pou3f4_5end | |||
|id=chrX:108009734..108009752,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.11e-22!44;CL:0000133!1.11e-22!44;CL:0002319!2.56e-22!43;CL:0000540!5.16e-21!33;CL:0000047!5.16e-21!33;CL:0000031!5.16e-21!33;CL:0000404!5.16e-21!33;CL:0000117!4.32e-18!23;CL:0000337!4.32e-18!23;CL:0000055!9.66e-17!50;CL:0000393!1.59e-15!39;CL:0000211!1.59e-15!39;CL:0002321!9.76e-09!70;CL:0000220!9.76e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-26,23;CL:0000337,1.87e-26,23;CL:0002319,2.78e-25,43;CL:0000221,1.88e-24,44;CL:0000133,1.88e-24,44;CL:0000540,2.07e-24,33;CL:0000047,2.07e-24,33;CL:0000031,2.07e-24,33;CL:0000404,2.07e-24,33;CL:0000393,3.40e-19,39;CL:0000211,3.40e-19,39;CL:0002321,2.00e-11,70;CL:0002609,1.27e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.26e-35!73;UBERON:0005743!1.26e-35!73;UBERON:0000073!9.26e-35!75;UBERON:0001016!9.26e-35!75;UBERON:0001049!1.86e-23!52;UBERON:0005068!1.86e-23!52;UBERON:0006241!1.86e-23!52;UBERON:0007135!1.86e-23!52;UBERON:0000955!3.59e-22!50;UBERON:0006238!3.59e-22!50;UBERON:0004121!4.50e-22!102;UBERON:0000924!4.50e-22!102;UBERON:0006601!4.50e-22!102;UBERON:0002616!2.31e-21!49;UBERON:0003080!4.84e-19!40;UBERON:0002780!2.87e-18!39;UBERON:0001890!2.87e-18!39;UBERON:0006240!2.87e-18!39;UBERON:0002020!7.23e-17!34;UBERON:0000033!1.51e-16!63;UBERON:0002346!5.08e-16!71;UBERON:0003075!5.08e-16!71;UBERON:0007284!5.08e-16!71;UBERON:0002791!1.37e-13!29;UBERON:0003528!1.37e-13!29;UBERON:0001893!1.37e-13!29;UBERON:0003056!2.41e-13!49;UBERON:0000956!3.84e-08!21;UBERON:0001869!3.84e-08!21;UBERON:0000203!3.84e-08!21;UBERON:0000153!1.57e-07!94;UBERON:0007811!1.64e-07!86;UBERON:0002420!3.47e-07!8;UBERON:0007245!3.47e-07!8;UBERON:0010009!3.47e-07!8;UBERON:0010011!3.47e-07!8;UBERON:0000454!3.47e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.21e-41,73;UBERON:0001016,1.16e-39,75;UBERON:0000073,1.04e-32,54;UBERON:0001049,1.28e-30,52;UBERON:0005068,1.28e-30,52;UBERON:0006241,1.28e-30,52;UBERON:0007135,1.28e-30,52;UBERON:0004121,1.04e-27,95;UBERON:0000924,1.04e-27,95;UBERON:0006601,1.04e-27,95;UBERON:0000955,1.09e-25,47;UBERON:0006238,1.09e-25,47;UBERON:0002616,1.51e-24,46;UBERON:0003080,2.85e-24,40;UBERON:0002346,1.04e-23,64;UBERON:0003075,1.04e-23,64;UBERON:0007284,1.04e-23,64;UBERON:0002780,3.77e-23,39;UBERON:0001890,3.77e-23,39;UBERON:0006240,3.77e-23,39;UBERON:0002020,1.08e-21,34;UBERON:0010371,1.13e-20,73;UBERON:0003056,6.75e-18,49;UBERON:0003528,6.63e-17,29;UBERON:0002791,6.63e-17,29;UBERON:0001893,6.63e-17,29;UBERON:0010314,1.08e-13,92;UBERON:0002420,4.95e-10,8;UBERON:0007245,4.95e-10,8;UBERON:0010009,4.95e-10,8;UBERON:0010011,4.95e-10,8;UBERON:0000454,4.95e-10,8;UBERON:0000956,3.86e-09,21;UBERON:0001869,3.86e-09,21;UBERON:0000203,3.86e-09,21;UBERON:0001954,9.86e-08,7;UBERON:0003022,9.86e-08,7;UBERON:0002421,9.86e-08,7;UBERON:0000349,9.86e-08,7;UBERON:0002600,9.86e-08,7;UBERON:0000369,1.08e-07,5;UBERON:0002435,1.08e-07,5;UBERON:0000204,1.08e-07,5;UBERON:0010082,1.08e-07,5;UBERON:0000025,2.54e-07,114;UBERON:0002240,3.26e-07,6;UBERON:0005174,3.26e-07,6;UBERON:0001137,3.26e-07,6;UBERON:0001894,3.81e-07,10;UBERON:0006222,3.81e-07,10;UBERON:0004111,7.89e-07,122;UBERON:0003076,8.68e-07,12;UBERON:0003057,8.68e-07,12 | |||
|phase1_expression=29.9478344085965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,2.54012269383853,3.07532393792285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,1.31811709640683,1.1665793944457,1.39986421625363,1.43752564364972,0,0,0,0,0,0,12.5436205732951,12.6957835025288,6.97214543856797,1.0165335962074,0,0,0,0,0.898800331555214,1.53687322128622,3.00699875694585,4.45519596494579,3.15487442027073,2.28520787523043,1.98781686856452,13.5964787128599,13.801747826626,10.1114066527102,3.30347642998166,1.78762273319263,2.76491759861238,7.51751840062105,7.04454855738554,8.33461392890816,1.3959149950069,1.68828783009504,3.20876320331301,3.24091444021034,1.85083185038834,3.54158947068071,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0.506719730950197,0,0,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0.209446706813455,0,0,0,0,3.89455662452539,6.40500843946077,8.04187853522332,2.43354048269187,2.30143911597297,4.36354893575076,3.73154905055843,0.101839363850316,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.3377599609307,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.75817529888305,0,0.252470927204373,0.315508219416257,0.390438744296638,1.50796378412959,0.238968797952552,1.11399337041197,1.69845918473299,0.809621403349789,1.16902343164525,0.395287777946524,4.4984984299053,0,0,0,0,0,1.21390318077491,0.604647113929502,0.377210159511796,0.590603785761546,0.614870295887855,0,0,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,0,3.78128297465751,7.1147276080515,2.14337035031592,3.19212420556092,1.60531935841864,1.64549020602121,0.304464949114599,0,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.71868654031819,1.20297227640581,0,0,2.02506750069542,0.900642406448441,0.453142408984205,1.03552062350364,6.01966615988225,7.98049746802062,2.04880326904961,0.729320151204882,1.46729213839588,1.10306105070008,1.55572709461131,0.618105171716683,2.24643446714271,0.252697211763798,1.52087579934144,0.565879024158229,0.749132059759059,0.704276676453562,0.918967503289812,1.42888107384922,0.347652977834566,1.15745532278223,1.23625770240992,0.735994600671987,0.685738504770831,0.887379030796687,1.66905332963125,1.30811774969096,1.03520318456864,0.676916863133412,0.548783918618318,0.526139422875686,0.950628796921032,1.68342681497322,0.711810108745045,1.18205378850676,1.22769312950907,0.464810523557898,0.578719832943424,2.49810577937946,0.935726433781634,0.429742108096597,0,0,0 | |||
|short_description=p2@Pou3f4 | |||
}} |
Latest revision as of 13:06, 1 October 2015
Short description: | p2@Pou3f4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pou3f4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1857 |
Association with transcript: | 5bp_to_ENSMUST00000078229_5end |
EntrezGene: | Pou3f4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-26 | 23 |
neural cell | 2.78e-25 | 43 |
ectodermal cell | 1.88e-24 | 44 |
neurectodermal cell | 1.88e-24 | 44 |
neuron | 2.07e-24 | 33 |
neuronal stem cell | 2.07e-24 | 33 |
neuroblast | 2.07e-24 | 33 |
electrically signaling cell | 2.07e-24 | 33 |
electrically responsive cell | 3.40e-19 | 39 |
electrically active cell | 3.40e-19 | 39 |
embryonic cell | 2.00e-11 | 70 |
neuron of cerebral cortex | 1.27e-08 | 6 |