FFCP PHASE1:Mm9::chr3:127256128..127256143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=28036 | |EntrezGene=28036 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=327 | |||
|TSSclassifier=NA | |||
|UniProt=Q05CL8 | |UniProt=Q05CL8 | ||
|association_with_transcript=122bp_to_ENSMUST00000029588_5end | |association_with_transcript=122bp_to_ENSMUST00000029588_5end | ||
|cluster_id=chr3:127256128..127256143,- | |||
|description=CAGE_peak_2_at_Larp7_5end | |description=CAGE_peak_2_at_Larp7_5end | ||
|id=chr3:127256128..127256143,- | |id=chr3:127256128..127256143,- | ||
|ontology_enrichment_celltype=CL:0000542!1.67e-07!13;CL:0000051!1.67e-07!13;CL:0000838!4.12e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.75e-09,13;CL:0000051,2.75e-09,13;CL:0000791,5.14e-09,9;CL:0000789,5.14e-09,9;CL:0002420,5.14e-09,9;CL:0002419,5.14e-09,9;CL:0000790,5.14e-09,9;CL:0000838,1.02e-08,12;CL:0000624,4.52e-08,8;CL:0000084,7.57e-08,11;CL:0000827,7.57e-08,11;CL:0000988,2.39e-07,32;CL:0002032,2.39e-07,32;CL:0000037,2.39e-07,32;CL:0000837,2.39e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.10e-10,36;UBERON:0002370,3.76e-09,23;UBERON:0000974,3.76e-09,23;UBERON:0004807,3.76e-09,23;UBERON:0005058,3.76e-09,23;UBERON:0003351,3.76e-09,23;UBERON:0009113,3.76e-09,23;UBERON:0003295,3.76e-09,23;UBERON:0009722,3.76e-09,23;UBERON:0005562,3.76e-09,23;UBERON:0007690,3.76e-09,23;UBERON:0000153,5.50e-09,43;UBERON:0006562,1.65e-08,24;UBERON:0003408,1.65e-08,24;UBERON:0001557,1.65e-08,24;UBERON:0001042,1.65e-08,24;UBERON:0008814,1.65e-08,24;UBERON:0009145,1.65e-08,24;UBERON:0000072,1.02e-07,27;UBERON:0004177,1.66e-07,29;UBERON:0005057,1.66e-07,29;UBERON:0001048,2.19e-07,134 | |||
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| ||
|short_description=p2@Larp7 | |short_description=p2@Larp7 | ||
}} | }} |
Latest revision as of 14:05, 1 October 2015
Short description: | p2@Larp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Larp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:327 |
Association with transcript: | 122bp_to_ENSMUST00000029588_5end |
EntrezGene: | Larp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.75e-09 | 13 |
common lymphoid progenitor | 2.75e-09 | 13 |
mature alpha-beta T cell | 5.14e-09 | 9 |
alpha-beta T cell | 5.14e-09 | 9 |
immature T cell | 5.14e-09 | 9 |
mature T cell | 5.14e-09 | 9 |
immature alpha-beta T cell | 5.14e-09 | 9 |
lymphoid lineage restricted progenitor cell | 1.02e-08 | 12 |
CD4-positive, alpha-beta T cell | 4.52e-08 | 8 |
T cell | 7.57e-08 | 11 |
pro-T cell | 7.57e-08 | 11 |
hematopoietic cell | 2.39e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.39e-07 | 32 |
hematopoietic stem cell | 2.39e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.39e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
craniocervical region | 1.10e-10 | 36 |
thymus | 3.76e-09 | 23 |
neck | 3.76e-09 | 23 |
respiratory system epithelium | 3.76e-09 | 23 |
hemolymphoid system gland | 3.76e-09 | 23 |
pharyngeal epithelium | 3.76e-09 | 23 |
thymic region | 3.76e-09 | 23 |
pharyngeal gland | 3.76e-09 | 23 |
entire pharyngeal arch endoderm | 3.76e-09 | 23 |
thymus primordium | 3.76e-09 | 23 |
early pharyngeal endoderm | 3.76e-09 | 23 |
anterior region of body | 5.50e-09 | 43 |
pharynx | 1.65e-08 | 24 |
gland of gut | 1.65e-08 | 24 |
upper respiratory tract | 1.65e-08 | 24 |
chordate pharynx | 1.65e-08 | 24 |
pharyngeal arch system | 1.65e-08 | 24 |
pharyngeal region of foregut | 1.65e-08 | 24 |
segment of respiratory tract | 1.02e-07 | 27 |
hemopoietic organ | 1.66e-07 | 29 |
immune organ | 1.66e-07 | 29 |
primordium | 2.19e-07 | 134 |