FFCP PHASE1:Mm9::chr13:3923932..3923959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238463 | |EntrezGene=238463 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UX10 | |UniProt=Q3UX10 | ||
|association_with_transcript=0bp_to_ENSMUST00000021639,NM_001033879,uc007pjg.2_5end | |association_with_transcript=0bp_to_ENSMUST00000021639,NM_001033879,uc007pjg.2_5end | ||
|cluster_id=chr13:3923932..3923959,+ | |||
|description=CAGE_peak_1_at_Tubal3_5end | |description=CAGE_peak_1_at_Tubal3_5end | ||
|id=chr13:3923932..3923959,+ | |id=chr13:3923932..3923959,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.39e-10!9;CL:0002251!3.39e-10!9;CL:0000239!4.00e-08!6;CL:0000677!4.00e-08!6;CL:0000212!4.00e-08!6;CL:0000584!4.00e-08!6;CL:0000075!8.93e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.25e-11,9;CL:0002251,2.25e-11,9;CL:0000239,5.06e-09,6;CL:0000677,5.06e-09,6;CL:0000584,5.06e-09,6;CL:0000075,1.44e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-22!43;UBERON:0005409!3.98e-20!59;UBERON:0000344!3.08e-17!15;UBERON:0001242!5.10e-15!13;UBERON:0000060!5.10e-15!13;UBERON:0001262!5.10e-15!13;UBERON:0004786!5.10e-15!13;UBERON:0004923!7.31e-13!24;UBERON:0003350!3.39e-10!9;UBERON:0004808!3.39e-10!9;UBERON:0001277!3.39e-10!9;UBERON:0000485!6.57e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-35,31;UBERON:0005409,6.83e-25,47;UBERON:0000344,2.22e-19,15;UBERON:0001242,7.41e-17,13;UBERON:0001262,7.41e-17,13;UBERON:0004786,7.41e-17,13;UBERON:0004923,2.30e-13,24;UBERON:0003350,2.25e-11,9;UBERON:0004808,2.25e-11,9;UBERON:0001277,2.25e-11,9;UBERON:0000485,6.56e-09,11;UBERON:0002108,7.65e-07,4 | |||
|phase1_expression=0,36.9913932097723,31.8499467572675,106.769866591311,104.687207558787,6.04365378882803,10.5125688267987,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,38.0781966248308,31.8878900683366,46.5127890933166,35.3224836850441,32.1052136701975,98.4321312784017,65.2758036078221,22.1730510655305,0,0,0,2.02196133825892,3.98963148860382,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0,0,0,11.7609396110632,0,0,0,0,0,0,0,0.125666591329675,7.66304399976559,0,0,0,0,0,13.0474232852686,0,0,67.4406625750681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91.8564216694958,70.3438507325028,0,0.696710015581316,8.11865006329188,36.504717956825,40.4728039797664,39.5669302314123,56.9434873853414,46.115707322723,15.3314477368164,18.502951899827,16.5719474051252,46.7386092500195,54.2506505185483,50.1836008601005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0.42366414172764,0,0,0,0,0,0,37.018066251991,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,3.34816556547584,0.627264888043406,2.18362563746178,0.134864346384821,0,0,12.9614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.919217542250071,2.889207461421,1.64828045791115,1.92551525755089,1.26348605881899,3.54871019846336,1.88626341386076,1.87283014939765,1.60062881012173,2.35485422718014,2.38146845641537,1.50649623728312,2.12200142510076,2.06042950401653,3.53277408322554,1.71434626192708,2.48466128623072,3.33810665926249,1.45346416632329,1.97629698872194,1.69229215783353,2.37806364734604,2.10455769150274,2.03706170768793,0,2.01679530811096,1.97008964751127,2.45538625901814,2.94379998253335,1.92906610981141,0,2.10538447600868,2.36358159453128,0,0,0 | |phase1_expression=0,36.9913932097723,31.8499467572675,106.769866591311,104.687207558787,6.04365378882803,10.5125688267987,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,38.0781966248308,31.8878900683366,46.5127890933166,35.3224836850441,32.1052136701975,98.4321312784017,65.2758036078221,22.1730510655305,0,0,0,2.02196133825892,3.98963148860382,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65155492342555,0,0,0,0,0,0,0,0,0,0,11.7609396110632,0,0,0,0,0,0,0,0.125666591329675,7.66304399976559,0,0,0,0,0,13.0474232852686,0,0,67.4406625750681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91.8564216694958,70.3438507325028,0,0.696710015581316,8.11865006329188,36.504717956825,40.4728039797664,39.5669302314123,56.9434873853414,46.115707322723,15.3314477368164,18.502951899827,16.5719474051252,46.7386092500195,54.2506505185483,50.1836008601005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,3.10113951801865,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0.42366414172764,0,0,0,0,0,0,37.018066251991,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,3.34816556547584,0.627264888043406,2.18362563746178,0.134864346384821,0,0,12.9614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.919217542250071,2.889207461421,1.64828045791115,1.92551525755089,1.26348605881899,3.54871019846336,1.88626341386076,1.87283014939765,1.60062881012173,2.35485422718014,2.38146845641537,1.50649623728312,2.12200142510076,2.06042950401653,3.53277408322554,1.71434626192708,2.48466128623072,3.33810665926249,1.45346416632329,1.97629698872194,1.69229215783353,2.37806364734604,2.10455769150274,2.03706170768793,0,2.01679530811096,1.97008964751127,2.45538625901814,2.94379998253335,1.92906610981141,0,2.10538447600868,2.36358159453128,0,0,0 | ||
|short_description=p1@Tubal3 | |short_description=p1@Tubal3 | ||
}} | }} |
Latest revision as of 14:11, 1 October 2015
Short description: | p1@Tubal3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubal3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000021639, NM_001033879, uc007pjg.2_5end |
EntrezGene: | Tubal3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.25e-11 | 9 |
epithelial cell of alimentary canal | 2.25e-11 | 9 |
brush border epithelial cell | 5.06e-09 | 6 |
gut absorptive cell | 5.06e-09 | 6 |
enterocyte | 5.06e-09 | 6 |
columnar/cuboidal epithelial cell | 1.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.47e-35 | 31 |
gastrointestinal system | 6.83e-25 | 47 |
mucosa | 2.22e-19 | 15 |
intestinal mucosa | 7.41e-17 | 13 |
wall of intestine | 7.41e-17 | 13 |
gastrointestinal system mucosa | 7.41e-17 | 13 |
organ component layer | 2.30e-13 | 24 |
epithelium of mucosa | 2.25e-11 | 9 |
gastrointestinal system epithelium | 2.25e-11 | 9 |
intestinal epithelium | 2.25e-11 | 9 |
simple columnar epithelium | 6.56e-09 | 11 |
small intestine | 7.65e-07 | 4 |