FFCP PHASE1:Mm9::chr1:75380160..75380163,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:75380160..75380163,+ to FFCP PHASE1:Mm9::chr1:75380160..75380163,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11790 | |EntrezGene=11790 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENSMUST00000146705_5end | |||
|cluster_id=chr1:75380160..75380163,+ | |||
|description=CAGE_peak_4_at_Speg_5end | |||
|id=chr1:75380160..75380163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.35e-08!23;UBERON:0001009!1.35e-08!23;UBERON:0007100!2.73e-08!18;UBERON:0000948!2.73e-08!18;UBERON:0005498!2.73e-08!18;UBERON:0004140!2.73e-08!18;UBERON:0009881!2.73e-08!18;UBERON:0004141!2.73e-08!18;UBERON:0003084!2.73e-08!18;UBERON:0007005!2.73e-08!18;UBERON:0004139!2.73e-08!18;UBERON:0004291!2.73e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.35e-09,18;UBERON:0000948,9.35e-09,18;UBERON:0005498,9.35e-09,18;UBERON:0004140,9.35e-09,18;UBERON:0009881,9.35e-09,18;UBERON:0004141,9.35e-09,18;UBERON:0003084,9.35e-09,18;UBERON:0007005,9.35e-09,18;UBERON:0004139,9.35e-09,18;UBERON:0004291,9.35e-09,18;UBERON:0004535,1.46e-08,23;UBERON:0001009,1.46e-08,23 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,5.13930906052708,0,0,0,0.777719596297134,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0,0.287536413054709,0,0,0,0.307213066512487,0.395658863190582,0,0,1.11673199600552,0,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,0,0,0,0,0.702222100658759,4.94247935476367,5.97507810586598,4.59341446863442,1.69012103732017,6.41632387071589,12.7402619853323,7.11066703153331,0,0,0.505524445014783,0.79928715803342,0,0.593768556259299,2.25530924795977,0.304465478312141,2.07553947530453,0.904335843315735,1.17588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,2.58826959915855,5.52103796150984,2.90925151881133,0,5.85561594023094,8.58731497935166,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,2.25971616249959,1.27857728665165,1.24672826735736,1.62241263067758,1.83310854930569,0.746441823660558,0,0.210441855886474,1.04096354370163,1.37941262660084,0.540186389416048,2.71268672104287,1.02054748726992,1.66547836370305,1.21812241927647,0.776110112217047,0.862271971731369,2.26927296201383,0.703804496655795,1.97276159184817,3.61461423993277,1.0447564995665,1.4404749548556,5.17489093728082,0,0,0,1.86413195281952,6.80125573945179,4.14142741360334,3.31442629819294,4.9191057936851,6.63348585415727,10.2314935690179,8.04820204198858,5.60473643362414,12.5065485934245,12.9692296622485,8.431156192769,13.4503988431306,8.78200461164202,7.51555945058082,1.47202963994889,1.13195073617213,0,0,1.2797295032114,2.78684006232526,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,1.42358718463353,0.494096864172033,2.26201687920243,0.596869416123452,1.75467678407208,0.898819408654221,1.29682829924817,0.796565093017469,2.27601481143698,2.85621281524322,2.25415471346161,2.8511185898344,1.74557238450863,1.33258057791605,1.39120381673366,0.590440591918409,0.627994911365499,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.717589654087649,0.482443521363367,0.739012760666419,0.37898282354097,1.62964976442026,0.848725428875941,2.11221223459652,1.00503754465089,0.952174563544055,1.17080188714679,0.630540576424764,2.43611158613652,2.07291199254733,1.80249646187312,1.38147985492716,1.73578870297814,0,0,1.47529281905711,0.275936746304732,0.80275294993896,1.99259867206745,0.163934945376675,7.06918596172244,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.60660658210904,1.13552068166615,4.27357448801413,1.46598263418218,3.62934270539578,0,1.45668381692989,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,1.26414703174326,0,0,1.70219802876894,2.16073312837572,2.06973894052407,2.7863814554107,1.06404140185364,0.713475270408282,3.1264313914403,0.608929898229199,1.87737366450968,0.42366414172764,0,0.8244312647074,0.645857706783622,0.603129249281559,0.596861720015682,0.164140899745061,1.1659233465194,0.556275906031529,0,1.857481811669,2.03713980106683,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,1.10717597753397,1.01659733563424,2.16010681643603,2.71814784818809,2.62035076495413,2.02296519577231,1.98368293740806,2.6175594198403,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,1.15820943319968,1.55560950675238,1.29159823477731,2.36538575687089,1.99507305697782,1.5624526181274,0.209718688851422,0.241584120826006,2.01621004380506,0,0.810900861160657,0,0.129920822977795,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,4.53460767230423,0.443971906748129,1.07656627931371,0.503653849092235,1.9318959403219,2.81523713176773,2.19781949120718,0.857473516316263,0,2.25900737046827,2.76195141904306,0,4.29632955859219,0.685082519770642,3.0215755895588,2.70009000092722,0.900642406448441,2.26571204492102,2.07104124700728,0.31136204275253,0.798049746802062,1.70733605754134,4.86213434136588,0.838452650511929,0.735374033800057,1.55572709461131,1.85431551515005,1.60459604795908,1.76888048234658,1.52087579934144,2.07488975524684,2.1537546718073,1.92075457214608,2.41228969613576,1.90517476513229,1.73826488917283,2.31491064556446,0.824171801606613,1.03039244094078,2.05721551431249,2.30718548007139,2.86123427936785,2.0348498328526,1.88218760830661,3.80765735512544,2.0122077016005,1.57841826862706,3.12349461845482,1.68342681497322,1.42362021749009,2.36410757701352,3.27384834535751,3.09873682371932,1.92906610981141,1.74867404556562,2.8071793013449,1.50409737833809,2.10417165275728,1.54413993383661,1.85494268496337 | |phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,5.13930906052708,0,0,0,0.777719596297134,0.55994568650145,0,0,0,0,0.771778308107841,0.85960031981627,0,0.404632921719196,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,0.856952953211411,0.441737081903227,0,0.287536413054709,0,0,0,0.307213066512487,0.395658863190582,0,0,1.11673199600552,0,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0,0.151143120213571,0.579728977403356,1.72084775396277,0,0,0,0,0.702222100658759,4.94247935476367,5.97507810586598,4.59341446863442,1.69012103732017,6.41632387071589,12.7402619853323,7.11066703153331,0,0,0.505524445014783,0.79928715803342,0,0.593768556259299,2.25530924795977,0.304465478312141,2.07553947530453,0.904335843315735,1.17588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,2.58826959915855,5.52103796150984,2.90925151881133,0,5.85561594023094,8.58731497935166,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,1.38219787324151,2.25971616249959,1.27857728665165,1.24672826735736,1.62241263067758,1.83310854930569,0.746441823660558,0,0.210441855886474,1.04096354370163,1.37941262660084,0.540186389416048,2.71268672104287,1.02054748726992,1.66547836370305,1.21812241927647,0.776110112217047,0.862271971731369,2.26927296201383,0.703804496655795,1.97276159184817,3.61461423993277,1.0447564995665,1.4404749548556,5.17489093728082,0,0,0,1.86413195281952,6.80125573945179,4.14142741360334,3.31442629819294,4.9191057936851,6.63348585415727,10.2314935690179,8.04820204198858,5.60473643362414,12.5065485934245,12.9692296622485,8.431156192769,13.4503988431306,8.78200461164202,7.51555945058082,1.47202963994889,1.13195073617213,0,0,1.2797295032114,2.78684006232526,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,1.42358718463353,0.494096864172033,2.26201687920243,0.596869416123452,1.75467678407208,0.898819408654221,1.29682829924817,0.796565093017469,2.27601481143698,2.85621281524322,2.25415471346161,2.8511185898344,1.74557238450863,1.33258057791605,1.39120381673366,0.590440591918409,0.627994911365499,0.740382983530803,0,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.717589654087649,0.482443521363367,0.739012760666419,0.37898282354097,1.62964976442026,0.848725428875941,2.11221223459652,1.00503754465089,0.952174563544055,1.17080188714679,0.630540576424764,2.43611158613652,2.07291199254733,1.80249646187312,1.38147985492716,1.73578870297814,0,0,1.47529281905711,0.275936746304732,0.80275294993896,1.99259867206745,0.163934945376675,7.06918596172244,0.315508219416257,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.809621403349789,0,0.395287777946524,1.60660658210904,1.13552068166615,4.27357448801413,1.46598263418218,3.62934270539578,0,1.45668381692989,1.51161778482376,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,1.26414703174326,0,0,1.70219802876894,2.16073312837572,2.06973894052407,2.7863814554107,1.06404140185364,0.713475270408282,3.1264313914403,0.608929898229199,1.87737366450968,0.42366414172764,0,0.8244312647074,0.645857706783622,0.603129249281559,0.596861720015682,0.164140899745061,1.1659233465194,0.556275906031529,0,1.857481811669,2.03713980106683,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0,1.10717597753397,1.01659733563424,2.16010681643603,2.71814784818809,2.62035076495413,2.02296519577231,1.98368293740806,2.6175594198403,1.29614973291793,0.621339313086926,0.56369293868419,1.49516546043979,1.15820943319968,1.55560950675238,1.29159823477731,2.36538575687089,1.99507305697782,1.5624526181274,0.209718688851422,0.241584120826006,2.01621004380506,0,0.810900861160657,0,0.129920822977795,0.716106782669926,0.198681354781265,0.240390899039938,0.147689527174577,0.201932899896295,0.457240839929999,0.302478555410522,0.194915761479505,0.288635524920988,0.116876902181569,4.53460767230423,0.443971906748129,1.07656627931371,0.503653849092235,1.9318959403219,2.81523713176773,2.19781949120718,0.857473516316263,0,2.25900737046827,2.76195141904306,0,4.29632955859219,0.685082519770642,3.0215755895588,2.70009000092722,0.900642406448441,2.26571204492102,2.07104124700728,0.31136204275253,0.798049746802062,1.70733605754134,4.86213434136588,0.838452650511929,0.735374033800057,1.55572709461131,1.85431551515005,1.60459604795908,1.76888048234658,1.52087579934144,2.07488975524684,2.1537546718073,1.92075457214608,2.41228969613576,1.90517476513229,1.73826488917283,2.31491064556446,0.824171801606613,1.03039244094078,2.05721551431249,2.30718548007139,2.86123427936785,2.0348498328526,1.88218760830661,3.80765735512544,2.0122077016005,1.57841826862706,3.12349461845482,1.68342681497322,1.42362021749009,2.36410757701352,3.27384834535751,3.09873682371932,1.92906610981141,1.74867404556562,2.8071793013449,1.50409737833809,2.10417165275728,1.54413993383661,1.85494268496337 | ||
|short_description=p4@Speg | |||
}} | }} |
Latest revision as of 15:26, 1 October 2015
Short description: | p4@Speg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Speg_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 29bp_to_ENSMUST00000146705_5end |
EntrezGene: | Speg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.35e-09 | 18 |
heart | 9.35e-09 | 18 |
primitive heart tube | 9.35e-09 | 18 |
primary heart field | 9.35e-09 | 18 |
anterior lateral plate mesoderm | 9.35e-09 | 18 |
heart tube | 9.35e-09 | 18 |
heart primordium | 9.35e-09 | 18 |
cardiac mesoderm | 9.35e-09 | 18 |
cardiogenic plate | 9.35e-09 | 18 |
heart rudiment | 9.35e-09 | 18 |
cardiovascular system | 1.46e-08 | 23 |
circulatory system | 1.46e-08 | 23 |