FFCP PHASE1:Mm9::chr1:75503794..75503819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16322 | |EntrezGene=16322 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=919 | |||
|TSSclassifier=NA | |||
|UniProt=Q04997 | |UniProt=Q04997 | ||
|association_with_transcript=142bp_to_ENSMUST00000037330,NM_010564,uc007bps.1_5end | |association_with_transcript=142bp_to_ENSMUST00000037330,NM_010564,uc007bps.1_5end | ||
|cluster_id=chr1:75503794..75503819,+ | |||
|description=CAGE_peak_1_at_Inha_5end | |description=CAGE_peak_1_at_Inha_5end | ||
|id=chr1:75503794..75503819,+ | |id=chr1:75503794..75503819,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.51e-14!18;UBERON:0005564!2.51e-14!18;UBERON:0004176!1.65e-13!17;UBERON:0009196!1.65e-13!17;UBERON:0009117!1.65e-13!17;UBERON:0003133!1.13e-11!24;UBERON:0005156!1.49e-11!26;UBERON:0000990!1.49e-11!26;UBERON:0000473!4.59e-11!14;UBERON:0003135!5.99e-10!15;UBERON:0003101!5.55e-09!16;UBERON:0000079!5.55e-09!16;UBERON:0002369!2.16e-07!7;UBERON:0006858!2.16e-07!7;UBERON:0002323!2.52e-07!37;UBERON:0004458!2.52e-07!37;UBERON:0003886!6.39e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,3.19e-24,18;UBERON:0005564,3.19e-24,18;UBERON:0004176,1.18e-22,17;UBERON:0009196,1.18e-22,17;UBERON:0009117,1.18e-22,17;UBERON:0005156,8.73e-22,26;UBERON:0000990,8.73e-22,26;UBERON:0003133,1.54e-21,24;UBERON:0000473,5.66e-18,14;UBERON:0003135,1.50e-16,15;UBERON:0003101,2.64e-15,16;UBERON:0000079,2.64e-15,16;UBERON:0002369,8.02e-13,7;UBERON:0006858,8.02e-13,7;UBERON:0002323,5.64e-12,37;UBERON:0004458,5.64e-12,37;UBERON:0003886,1.58e-11,38;UBERON:0002553,4.18e-11,39;UBERON:0000926,3.39e-08,120;UBERON:0004120,3.39e-08,120;UBERON:0006603,3.39e-08,120;UBERON:0003064,2.25e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8531602059252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5111105032938,0.170430322578058,0,0,0,0,0,0,0,0,0,3.88225191044804,0,12.6175818205101,109.122270535899,171.718529768048,242.376887616117,224.275289142302,96.6579172655494,25.3846514485944,0.247194967734374,0,0,0.323533699894818,4.41683036920787,2.90925151881133,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,4.78645010096487,0.995255764880744,0,0.420883711772948,0.390361328888111,0,0.720248519221397,0,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0.378212160335639,0.879755620819744,2.19195732427575,1.66828349535359,1.0447564995665,0.205782136407943,26.0734889532226,0,0,0,0.828503090142008,2.11073453982987,0,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0,0.329119699826961,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0,0,0,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0,0,0,0.164698954724011,0,0.795825888164603,0,0,0,0,1.32767530667157,7.5404018322421,1.1270773567308,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,18.935319540328,0,0,0,0,0,0,0,0,0,0,263.014977890922,7.30068975035746,5.86393053672874,3.13443233647817,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,1.45413491791002,1.42598951353889,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,58.0603726844716,78.0476370349569,135.179586703449,179.6728980299,256.640569250252,296.011131859843,268.396004782839,216.920505150021,223.245544282338,190.851455452545,133.64592290365,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,2.56412273974171,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,1.36586884603307,1.70174701947806,0.419226325255965,0.735374033800057,0.888986911206461,1.64828045791115,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,1.68554713445788,1.15245274328765,1.43588672389033,0.476293691283074,1.0429589335037,1.73618298417335,0.824171801606613,1.03039244094078,1.02860775715625,1.77475806159337,0.953744759789284,0.872078499793971,1.12931256498397,0.676916863133412,0.914639864363863,0.789209134313529,1.22223702461276,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,1.39443157067369,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8531602059252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.5111105032938,0.170430322578058,0,0,0,0,0,0,0,0,0,3.88225191044804,0,12.6175818205101,109.122270535899,171.718529768048,242.376887616117,224.275289142302,96.6579172655494,25.3846514485944,0.247194967734374,0,0,0.323533699894818,4.41683036920787,2.90925151881133,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,4.78645010096487,0.995255764880744,0,0.420883711772948,0.390361328888111,0,0.720248519221397,0,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0.378212160335639,0.879755620819744,2.19195732427575,1.66828349535359,1.0447564995665,0.205782136407943,26.0734889532226,0,0,0,0.828503090142008,2.11073453982987,0,0.473489471170421,0,0.308534225774757,0,0.536546802799238,0,0.329119699826961,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0,0,0,0,0.213288250535234,0.928946687441754,0.128867461322093,0,0,0,0,0.164698954724011,0,0.795825888164603,0,0,0,0,1.32767530667157,7.5404018322421,1.1270773567308,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,18.935319540328,0,0,0,0,0,0,0,0,0,0,263.014977890922,7.30068975035746,5.86393053672874,3.13443233647817,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0,0,1.45413491791002,1.42598951353889,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0.165306911450672,0,0,0,58.0603726844716,78.0476370349569,135.179586703449,179.6728980299,256.640569250252,296.011131859843,268.396004782839,216.920505150021,223.245544282338,190.851455452545,133.64592290365,0,0,0,0,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,2.56412273974171,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,1.36586884603307,1.70174701947806,0.419226325255965,0.735374033800057,0.888986911206461,1.64828045791115,0.64183841918363,0.252697211763798,0.25347929989024,0.754505365544305,1.68554713445788,1.15245274328765,1.43588672389033,0.476293691283074,1.0429589335037,1.73618298417335,0.824171801606613,1.03039244094078,1.02860775715625,1.77475806159337,0.953744759789284,0.872078499793971,1.12931256498397,0.676916863133412,0.914639864363863,0.789209134313529,1.22223702461276,1.12228454331548,0.474540072496697,0.492522411877817,0.818462086339379,1.39443157067369,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0.220591419119515,0.927471342481686 | ||
|short_description=p1@Inha | |short_description=p1@Inha | ||
}} | }} |
Latest revision as of 15:34, 1 October 2015
Short description: | p1@Inha |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Inha_5end |
Coexpression cluster: | MCL_coexpression_mm9:919 |
Association with transcript: | 142bp_to_ENSMUST00000037330, NM_010564, uc007bps.1_5end |
EntrezGene: | Inha |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 3.19e-24 | 18 |
gonad primordium | 3.19e-24 | 18 |
external genitalia | 1.18e-22 | 17 |
indifferent external genitalia | 1.18e-22 | 17 |
indifferent gonad | 1.18e-22 | 17 |
reproductive structure | 8.73e-22 | 26 |
reproductive system | 8.73e-22 | 26 |
reproductive organ | 1.54e-21 | 24 |
testis | 5.66e-18 | 14 |
male reproductive organ | 1.50e-16 | 15 |
male organism | 2.64e-15 | 16 |
male reproductive system | 2.64e-15 | 16 |
adrenal gland | 8.02e-13 | 7 |
adrenal/interrenal gland | 8.02e-13 | 7 |
body cavity | 5.64e-12 | 37 |
body cavity or lining | 5.64e-12 | 37 |
body cavity precursor | 1.58e-11 | 38 |
anatomical cavity | 4.18e-11 | 39 |
mesoderm | 3.39e-08 | 120 |
mesoderm-derived structure | 3.39e-08 | 120 |
presumptive mesoderm | 3.39e-08 | 120 |
intermediate mesoderm | 2.25e-07 | 14 |