FFCP PHASE1:Mm9::chr18:67020112..67020139,-: Difference between revisions
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{{FFCP|EntrezGene=17202|HGNC=|MCL_coexpression_id=76|UniProt=P56450|association_with_transcript=0bp_to_ENSMUST00000057942,NM_016977,uc008ffv.1_5end|description=CAGE_peak_1_at_Mc4r_5end|id=chr18:67020112..67020139,-|ontology_enrichment_celltype=CL:0000540!1.42e-14!33;CL:0000047!1.42e-14!33;CL:0000031!1.42e-14!33;CL:0000404!1.42e-14!33;CL:0000117!4.15e-14!23;CL:0000337!4.15e-14!23;CL:0002319!1.59e-11!43;CL:0000221!2.16e-11!44;CL:0000133!2.16e-11!44;CL:0000393!1.48e-10!39;CL:0000211!1.48e-10!39;CL:0000055!3.28e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.14e-20,23;CL:0000337,6.14e-20,23;CL:0000540,9.44e-17,33;CL:0000047,9.44e-17,33;CL:0000031,9.44e-17,33;CL:0000404,9.44e-17,33;CL:0000393,9.09e-13,39;CL:0000211,9.09e-13,39;CL:0002319,9.08e-11,43;CL:0000221,2.49e-10,44;CL:0000133,2.49e-10,44;CL:0002609,2.23e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.77e-20!73;UBERON:0005743!1.77e-20!73;UBERON:0000073!1.19e-19!75;UBERON:0001016!1.19e-19!75;UBERON:0001049!9.16e-18!52;UBERON:0005068!9.16e-18!52;UBERON:0006241!9.16e-18!52;UBERON:0007135!9.16e-18!52;UBERON:0002346!2.52e-17!71;UBERON:0003075!2.52e-17!71;UBERON:0007284!2.52e-17!71;UBERON:0004121!5.47e-17!102;UBERON:0000924!5.47e-17!102;UBERON:0006601!5.47e-17!102;UBERON:0002020!1.39e-15!34;UBERON:0002616!7.26e-15!49;UBERON:0003080!1.07e-14!40;UBERON:0003056!1.31e-14!49;UBERON:0002780!2.44e-14!39;UBERON:0001890!2.44e-14!39;UBERON:0006240!2.44e-14!39;UBERON:0000033!3.13e-14!63;UBERON:0000955!3.52e-14!50;UBERON:0006238!3.52e-14!50;UBERON:0002791!4.80e-12!29;UBERON:0003528!4.80e-12!29;UBERON:0001893!4.80e-12!29;UBERON:0000956!1.08e-08!21;UBERON:0001869!1.08e-08!21;UBERON:0000203!1.08e-08!21;UBERON:0000153!5.40e-08!94;UBERON:0007811!2.93e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.40e-22,54;UBERON:0001017,1.27e-21,73;UBERON:0001049,2.40e-21,52;UBERON:0005068,2.40e-21,52;UBERON:0006241,2.40e-21,52;UBERON:0007135,2.40e-21,52;UBERON:0001016,1.31e-20,75;UBERON:0002020,8.53e-17,34;UBERON:0003080,1.20e-16,40;UBERON:0002346,1.42e-16,64;UBERON:0003075,1.42e-16,64;UBERON:0007284,1.42e-16,64;UBERON:0002780,3.87e-16,39;UBERON:0001890,3.87e-16,39;UBERON:0006240,3.87e-16,39;UBERON:0002616,8.30e-16,46;UBERON:0004121,2.29e-15,95;UBERON:0000924,2.29e-15,95;UBERON:0006601,2.29e-15,95;UBERON:0000955,3.08e-15,47;UBERON:0006238,3.08e-15,47;UBERON:0003056,1.98e-13,49;UBERON:0010371,6.68e-13,73;UBERON:0003528,4.61e-12,29;UBERON:0002791,4.61e-12,29;UBERON:0001893,4.61e-12,29;UBERON:0010314,9.84e-08,92;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0000956,1.62e-07,21;UBERON:0001869,1.62e-07,21;UBERON:0000203,1.62e-07,21;UBERON:0001948,9.63e-07,5;UBERON:0002315,9.63e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,48.0082904988252,74.7932898357566,57.8393643716301,4.28476476605705,6.18431914664518,22.1708346579067,13.4183659425531,32.1726575313507,1.10115880999389,1.53224805702225,1.99688493233117,1.05509030184155,1.73826522844578,2.6045668527838,1.11673199600552,1.12552522006336,2.29197371665215,7.66034322231536,7.97281412474976,9.13357284543973,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.867426633830679,0.913396434936424,0.230615497256059,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,1.49790639404823,4.11750542536764,2.89005009859588,1.39059456153821,2.04572365864264,3.94797284663164,3.0825839982874,1.73126918545538,0,0.505445516867349,0.210441855886474,1.04096354370163,0.689706313300419,1.26043490863744,0.452114453507145,0.136072998302656,0.2562274405697,0.937017245597288,0,0.862271971731369,1.13463648100692,1.93546236580344,1.7535658594206,1.11218899690239,0,0,0.995171334092466,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.720332286654991,0.330418782983798,0,0.213288250535234,0.696710015581316,0.515469845288373,0,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.456994050438915,1.1270773567308,0,0.193952487167626,0.140271639780637,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,3.28192722458169,0,0.252470927204373,0.631016438832513,0.390438744296638,0,2.38968797952552,2.22798674082394,1.98153571552183,0.809621403349789,0.292255857911312,1.18586333383957,0,0,4.98583690268315,4.23506094319298,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,1.8006109403131,1.55230420539305,1.28602221018955,5.14286677562593,1.96205699362278,1.81003922662333,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0,0.165306911450672,1.30877970992015,0,3.72803587852155,0,2.69129782879162,3.80554528051325,9.13920585217024,7.62042958518613,9.96841140395591,5.63314745499619,2.0832701575032,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.102710957164827,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.915758121336325,0.214368379079066,0,1.6942555278512,5.9842280745933,3.43737308063638,3.60891682921744,0.685082519770642,0.755393897389701,0,1.35096360967266,1.81256963593682,0.51776031175182,0.415149390336707,0,1.02440163452481,2.18796045361465,1.46729213839588,1.83843508450014,1.77797382241292,2.47242068686673,1.60459604795908,0.252697211763798,2.78827229879264,1.13175804831646,1.68554713445788,1.79270426733634,1.26358031702349,1.90517476513229,1.15884325944855,0.578727661391115,1.23625770240992,1.47198920134397,1.02860775715625,1.77475806159337,1.43061713968393,2.90692833264657,1.2234219453993,1.94613598150856,1.82927972872773,2.63069711437843,1.90125759384206,1.68342681497322,1.54225523561426,1.67457620038458,0.409231043169689,0.929621047115796,0.578719832943424,2.74791635731741,0.935726433781634,0.644613162144895,0,0,0.695603506861264|short_description=p1@Mc4r}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17202 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=P56450 | |||
|association_with_transcript=0bp_to_ENSMUST00000057942,NM_016977,uc008ffv.1_5end | |||
|cluster_id=chr18:67020112..67020139,- | |||
|description=CAGE_peak_1_at_Mc4r_5end | |||
|id=chr18:67020112..67020139,- | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-14!33;CL:0000047!1.42e-14!33;CL:0000031!1.42e-14!33;CL:0000404!1.42e-14!33;CL:0000117!4.15e-14!23;CL:0000337!4.15e-14!23;CL:0002319!1.59e-11!43;CL:0000221!2.16e-11!44;CL:0000133!2.16e-11!44;CL:0000393!1.48e-10!39;CL:0000211!1.48e-10!39;CL:0000055!3.28e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.14e-20,23;CL:0000337,6.14e-20,23;CL:0000540,9.44e-17,33;CL:0000047,9.44e-17,33;CL:0000031,9.44e-17,33;CL:0000404,9.44e-17,33;CL:0000393,9.09e-13,39;CL:0000211,9.09e-13,39;CL:0002319,9.08e-11,43;CL:0000221,2.49e-10,44;CL:0000133,2.49e-10,44;CL:0002609,2.23e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-20!73;UBERON:0005743!1.77e-20!73;UBERON:0000073!1.19e-19!75;UBERON:0001016!1.19e-19!75;UBERON:0001049!9.16e-18!52;UBERON:0005068!9.16e-18!52;UBERON:0006241!9.16e-18!52;UBERON:0007135!9.16e-18!52;UBERON:0002346!2.52e-17!71;UBERON:0003075!2.52e-17!71;UBERON:0007284!2.52e-17!71;UBERON:0004121!5.47e-17!102;UBERON:0000924!5.47e-17!102;UBERON:0006601!5.47e-17!102;UBERON:0002020!1.39e-15!34;UBERON:0002616!7.26e-15!49;UBERON:0003080!1.07e-14!40;UBERON:0003056!1.31e-14!49;UBERON:0002780!2.44e-14!39;UBERON:0001890!2.44e-14!39;UBERON:0006240!2.44e-14!39;UBERON:0000033!3.13e-14!63;UBERON:0000955!3.52e-14!50;UBERON:0006238!3.52e-14!50;UBERON:0002791!4.80e-12!29;UBERON:0003528!4.80e-12!29;UBERON:0001893!4.80e-12!29;UBERON:0000956!1.08e-08!21;UBERON:0001869!1.08e-08!21;UBERON:0000203!1.08e-08!21;UBERON:0000153!5.40e-08!94;UBERON:0007811!2.93e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.40e-22,54;UBERON:0001017,1.27e-21,73;UBERON:0001049,2.40e-21,52;UBERON:0005068,2.40e-21,52;UBERON:0006241,2.40e-21,52;UBERON:0007135,2.40e-21,52;UBERON:0001016,1.31e-20,75;UBERON:0002020,8.53e-17,34;UBERON:0003080,1.20e-16,40;UBERON:0002346,1.42e-16,64;UBERON:0003075,1.42e-16,64;UBERON:0007284,1.42e-16,64;UBERON:0002780,3.87e-16,39;UBERON:0001890,3.87e-16,39;UBERON:0006240,3.87e-16,39;UBERON:0002616,8.30e-16,46;UBERON:0004121,2.29e-15,95;UBERON:0000924,2.29e-15,95;UBERON:0006601,2.29e-15,95;UBERON:0000955,3.08e-15,47;UBERON:0006238,3.08e-15,47;UBERON:0003056,1.98e-13,49;UBERON:0010371,6.68e-13,73;UBERON:0003528,4.61e-12,29;UBERON:0002791,4.61e-12,29;UBERON:0001893,4.61e-12,29;UBERON:0010314,9.84e-08,92;UBERON:0002240,1.50e-07,6;UBERON:0005174,1.50e-07,6;UBERON:0001137,1.50e-07,6;UBERON:0000956,1.62e-07,21;UBERON:0001869,1.62e-07,21;UBERON:0000203,1.62e-07,21;UBERON:0001948,9.63e-07,5;UBERON:0002315,9.63e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,2.63011399117477,3.1739458756322,1.90149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,48.0082904988252,74.7932898357566,57.8393643716301,4.28476476605705,6.18431914664518,22.1708346579067,13.4183659425531,32.1726575313507,1.10115880999389,1.53224805702225,1.99688493233117,1.05509030184155,1.73826522844578,2.6045668527838,1.11673199600552,1.12552522006336,2.29197371665215,7.66034322231536,7.97281412474976,9.13357284543973,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0,0.867426633830679,0.913396434936424,0.230615497256059,0.301445281105245,0.823120949949934,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,1.49790639404823,4.11750542536764,2.89005009859588,1.39059456153821,2.04572365864264,3.94797284663164,3.0825839982874,1.73126918545538,0,0.505445516867349,0.210441855886474,1.04096354370163,0.689706313300419,1.26043490863744,0.452114453507145,0.136072998302656,0.2562274405697,0.937017245597288,0,0.862271971731369,1.13463648100692,1.93546236580344,1.7535658594206,1.11218899690239,0,0,0.995171334092466,0,0,0,0,0.469052119962192,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.720332286654991,0.330418782983798,0,0.213288250535234,0.696710015581316,0.515469845288373,0,0.444756087689741,0,0,0.329397909448022,0,0.397912944082302,0,0,0,0,0,0.456994050438915,1.1270773567308,0,0.193952487167626,0.140271639780637,0.379419222745544,0.295220295959204,0.470996183524124,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,3.53211297973142,3.28192722458169,0,0.252470927204373,0.631016438832513,0.390438744296638,0,2.38968797952552,2.22798674082394,1.98153571552183,0.809621403349789,0.292255857911312,1.18586333383957,0,0,4.98583690268315,4.23506094319298,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,1.8006109403131,1.55230420539305,1.28602221018955,5.14286677562593,1.96205699362278,1.81003922662333,0,0.23467170806371,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0,0,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0,0.165306911450672,1.30877970992015,0,3.72803587852155,0,2.69129782879162,3.80554528051325,9.13920585217024,7.62042958518613,9.96841140395591,5.63314745499619,2.0832701575032,0.104859344425711,0,0.288030006257865,0,1.01362607645082,0.102710957164827,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.915758121336325,0.214368379079066,0,1.6942555278512,5.9842280745933,3.43737308063638,3.60891682921744,0.685082519770642,0.755393897389701,0,1.35096360967266,1.81256963593682,0.51776031175182,0.415149390336707,0,1.02440163452481,2.18796045361465,1.46729213839588,1.83843508450014,1.77797382241292,2.47242068686673,1.60459604795908,0.252697211763798,2.78827229879264,1.13175804831646,1.68554713445788,1.79270426733634,1.26358031702349,1.90517476513229,1.15884325944855,0.578727661391115,1.23625770240992,1.47198920134397,1.02860775715625,1.77475806159337,1.43061713968393,2.90692833264657,1.2234219453993,1.94613598150856,1.82927972872773,2.63069711437843,1.90125759384206,1.68342681497322,1.54225523561426,1.67457620038458,0.409231043169689,0.929621047115796,0.578719832943424,2.74791635731741,0.935726433781634,0.644613162144895,0,0,0.695603506861264 | |||
|short_description=p1@Mc4r | |||
}} |
Latest revision as of 15:57, 1 October 2015
Short description: | p1@Mc4r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mc4r_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 0bp_to_ENSMUST00000057942, NM_016977, uc008ffv.1_5end |
EntrezGene: | Mc4r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.14e-20 | 23 |
neuroblast (sensu Vertebrata) | 6.14e-20 | 23 |
neuron | 9.44e-17 | 33 |
neuronal stem cell | 9.44e-17 | 33 |
neuroblast | 9.44e-17 | 33 |
electrically signaling cell | 9.44e-17 | 33 |
electrically responsive cell | 9.09e-13 | 39 |
electrically active cell | 9.09e-13 | 39 |
neural cell | 9.08e-11 | 43 |
ectodermal cell | 2.49e-10 | 44 |
neurectodermal cell | 2.49e-10 | 44 |
neuron of cerebral cortex | 2.23e-08 | 6 |