FFCP PHASE1:Mm9::chr16:18348434..18348445,+: Difference between revisions
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|id=chr16:18348434..18348445,+
|short_description=p6@Arvcf
|description=CAGE_peak_6_at_Arvcf_5end
|association_with_transcript=67bp_to_ENSMUST00000090103,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11877 | |EntrezGene=11877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=P98203 | |UniProt=P98203 | ||
|association_with_transcript=67bp_to_ENSMUST00000090103,ENSMUST00000115613,ENSMUST00000115618,NM_033474,uc007ynl.1,uc007ynm.1_5end | |||
|cluster_id=chr16:18348434..18348445,+ | |||
|description=CAGE_peak_6_at_Arvcf_5end | |||
|id=chr16:18348434..18348445,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-12!50;CL:0000221!1.85e-12!44;CL:0000133!1.85e-12!44;CL:0002319!8.51e-12!43;CL:0002321!4.32e-10!70;CL:0000220!4.32e-10!70;CL:0000107!1.49e-09!9;CL:0000393!8.41e-09!39;CL:0000211!8.41e-09!39;CL:0000540!8.69e-09!33;CL:0000047!8.69e-09!33;CL:0000031!8.69e-09!33;CL:0000404!8.69e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.43e-21,2;CL:0002604,6.43e-21,2;CL:0002453,2.39e-20,8;CL:0000333,2.26e-16,10;CL:0000095,2.26e-16,10;CL:0000243,2.26e-16,10;CL:0000123,2.26e-16,10;CL:0000125,2.26e-16,10;CL:0000030,2.26e-16,10;CL:0000339,2.26e-16,10;CL:0000128,1.43e-15,6;CL:0000126,1.43e-15,6;CL:0000127,1.43e-15,6;CL:0000057,4.58e-11,1;CL:0000632,4.58e-11,1;CL:0002319,4.92e-11,43;CL:0000221,8.85e-11,44;CL:0000133,8.85e-11,44;CL:0000107,3.22e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.46e-10!73;UBERON:0005743!3.46e-10!73;UBERON:0000073!1.32e-09!75;UBERON:0001016!1.32e-09!75;UBERON:0002410!1.49e-09!9;UBERON:0004121!4.08e-08!102;UBERON:0000924!4.08e-08!102;UBERON:0006601!4.08e-08!102;UBERON:0000010!2.58e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.04e-13,3;UBERON:0002410,3.22e-10,9;UBERON:0000010,1.79e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,2.8343270329458,3.29529274101708,4.27745777963423,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,4.61061966385865,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0.919218786610021,0,0.127687338085188,0,0.263772575460388,0.640413505216868,0.52091337055676,0,0,0,0,0.284743361598206,0.745597783301202,0,0,0.579728977403356,2.58127163094416,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0,0,0,1.0108910337347,0,0,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,1.41538265394416,1.21443210502468,2.33804686329049,0.790575555893047,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,2.8343270329458,3.29529274101708,4.27745777963423,0.839918529752175,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.898800331555214,4.61061966385865,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0.244981598429908,0,0.919218786610021,0,0.127687338085188,0,0.263772575460388,0.640413505216868,0.52091337055676,0,0,0,0,0.284743361598206,0.745597783301202,0,0,0.579728977403356,2.58127163094416,0,0.539703191637817,0,0.448026887097336,0,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0.251308704225729,0,0,0,0,0,0,1.0108910337347,0,0,0.229902104433473,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.646270193198397,0.238968797952552,0.222798674082394,1.41538265394416,1.21443210502468,2.33804686329049,0.790575555893047,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0.209718688851422,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0.906284817968409,0,0.103787347584177,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Arvcf | |||
}} | }} |
Latest revision as of 17:05, 1 October 2015
Short description: | p6@Arvcf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arvcf_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 67bp_to_ENSMUST00000090103, ENSMUST00000115613, ENSMUST00000115618, NM_033474, uc007ynl.1, uc007ynm.1_5end |
EntrezGene: | Arvcf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.43e-21 | 2 |
astrocyte of the hippocampus | 6.43e-21 | 2 |
oligodendrocyte precursor cell | 2.39e-20 | 8 |
migratory neural crest cell | 2.26e-16 | 10 |
neuron associated cell | 2.26e-16 | 10 |
glial cell (sensu Vertebrata) | 2.26e-16 | 10 |
neuron associated cell (sensu Vertebrata) | 2.26e-16 | 10 |
glial cell | 2.26e-16 | 10 |
glioblast | 2.26e-16 | 10 |
glioblast (sensu Vertebrata) | 2.26e-16 | 10 |
oligodendrocyte | 1.43e-15 | 6 |
macroglial cell | 1.43e-15 | 6 |
astrocyte | 1.43e-15 | 6 |
fibroblast | 4.58e-11 | 1 |
hepatic stellate cell | 4.58e-11 | 1 |
neural cell | 4.92e-11 | 43 |
ectodermal cell | 8.85e-11 | 44 |
neurectodermal cell | 8.85e-11 | 44 |
autonomic neuron | 3.22e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.04e-13 | 3 |
autonomic nervous system | 3.22e-10 | 9 |
peripheral nervous system | 1.79e-08 | 11 |