Personal tools

FFCP PHASE1:Mm9::chr18:74375754..74375763,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:74375754..74375763,+
|DHSsupport=NA
|short_description=p4@Cxxc1
|DPIdataset=NA
|description=CAGE_peak_4_at_Cxxc1_5end
|association_with_transcript=-21bp_to_ENSMUST00000025444_5end
|EntrezGene=74322
|EntrezGene=74322
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CWW7
|UniProt=Q9CWW7
|association_with_transcript=-21bp_to_ENSMUST00000025444_5end
|cluster_id=chr18:74375754..74375763,+
|description=CAGE_peak_4_at_Cxxc1_5end
|id=chr18:74375754..74375763,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.87e-09!29;UBERON:0005057!2.22e-08!51;UBERON:0002323!3.04e-07!37;UBERON:0004458!3.04e-07!37;UBERON:0002553!5.14e-07!39;UBERON:0003408!7.19e-07!24;UBERON:0001041!9.23e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0002323,6.66e-12,37;UBERON:0004458,6.66e-12,37;UBERON:0003886,1.78e-11,38;UBERON:0002553,4.53e-11,39;UBERON:0004177,8.29e-11,29;UBERON:0005057,8.29e-11,29;UBERON:0000473,9.96e-09,14;UBERON:0000077,2.27e-08,35;UBERON:0003135,4.88e-08,15;UBERON:0002390,5.07e-08,45;UBERON:0003061,5.07e-08,45;UBERON:0003101,1.95e-07,16;UBERON:0000079,1.95e-07,16;UBERON:0002370,2.19e-07,23;UBERON:0000974,2.19e-07,23;UBERON:0004807,2.19e-07,23;UBERON:0005058,2.19e-07,23;UBERON:0003351,2.19e-07,23;UBERON:0009113,2.19e-07,23;UBERON:0003295,2.19e-07,23;UBERON:0009722,2.19e-07,23;UBERON:0005562,2.19e-07,23;UBERON:0007690,2.19e-07,23;UBERON:0002193,2.79e-07,48;UBERON:0002405,2.79e-07,48;UBERON:0000072,4.24e-07,27;UBERON:0006562,5.49e-07,24;UBERON:0003408,5.49e-07,24;UBERON:0001557,5.49e-07,24;UBERON:0001042,5.49e-07,24;UBERON:0008814,5.49e-07,24;UBERON:0009145,5.49e-07,24;UBERON:0004176,6.63e-07,17;UBERON:0009196,6.63e-07,17;UBERON:0009117,6.63e-07,17
|phase1_expression=0,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,1.16806320297763,0.516493293766305,0.281577444303333,0.468129052643987,0.856089841127525,0.717949430958028,0.342401459862411,0.437102012094987,2.33176833270964,2.42970320867791,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,1.02051948181284,0.198581902401771,0.261199789138935,0.47997726838022,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,1.84519436275371,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,1.00828139742739,0.514518872071894,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.311068836925433,1.89008313664367,0.420649922702764,0.285650984403804,0.441737081903227,0.367472397644862,0.670918297127655,1.83843757322004,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.302286240427142,0,0,2.03991400112325,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,2.65383165584962,0.161766849947409,0.883366073841574,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.479260498023681,0,1.01656181658452,0,0.457500602818626,0.376963056338593,0,0.255715457330331,0,0,0,0.497627882440372,0,0.210441855886474,0.390361328888111,0.689706313300419,0,0.60281927134286,0.884474488967262,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.252946148497029,0,0,0.246794327843601,0.296452627087149,1.50160595144485,1.57247196090562,2.69834534861824,0.811440485554012,1.4470629585145,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,1.96705709207614,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,1.32023555829129,0.885905678642318,0,2.06742634534577,0.363533729477506,0.356497378384721,1.26414703174326,2.10837217149998,5.15677716240934,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0.938686832254841,0,0,0,0.322928853391811,0.241251699712623,0.358117032009409,0.492422699235184,0,0.370850604021019,1.02522528478712,0.412773735926445,1.48155621895769,2.26042148405629,1.6403307326523,0.457556346413045,0,0.279902904647316,0.138199973804424,0.954670618015114,0,0.406638934253697,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0.149516546043979,0.66183396182839,1.75006069509643,3.09983576346555,1.68956125490778,0.704143431874524,2.21347454234715,4.19437377702843,4.1069300540421,2.59227005632079,2.21207784439725,0.405450430580328,0.513554785824136,1.55904987573354,1.07416017400489,1.39076948346885,1.32214994471966,1.77227432609493,1.51449674922221,1.600342939755,1.41156659191577,1.36441033035653,0.865906574762965,1.40252282617883,0,0.665957860122194,2.9605572681127,0.839423081820392,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.34461281373368,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.338458431566706,0,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0.220591419119515,0
|phase1_expression=0,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,1.16806320297763,0.516493293766305,0.281577444303333,0.468129052643987,0.856089841127525,0.717949430958028,0.342401459862411,0.437102012094987,2.33176833270964,2.42970320867791,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,1.02051948181284,0.198581902401771,0.261199789138935,0.47997726838022,0,1.14846392823004,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,1.84519436275371,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0.683045484958446,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,1.00828139742739,0.514518872071894,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,0,0,0,0.299600110518405,0,0.311068836925433,1.89008313664367,0.420649922702764,0.285650984403804,0.441737081903227,0.367472397644862,0.670918297127655,1.83843757322004,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.37863096666592,0.302286240427142,0,0,2.03991400112325,0.539703191637817,0,0,0.421333260395256,0,0.259786004602869,0,0,0,0,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0,0,0,0,0,2.65383165584962,0.161766849947409,0.883366073841574,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.479260498023681,0,1.01656181658452,0,0.457500602818626,0.376963056338593,0,0.255715457330331,0,0,0,0.497627882440372,0,0.210441855886474,0.390361328888111,0.689706313300419,0,0.60281927134286,0.884474488967262,0.2562274405697,0.281105173679186,0,0.431135985865684,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.252946148497029,0,0,0.246794327843601,0.296452627087149,1.50160595144485,1.57247196090562,2.69834534861824,0.811440485554012,1.4470629585145,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0.568474235311454,0.488894929326078,0,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,1.96705709207614,0,0.481651769963376,0.117211686592203,0,0,0.315508219416257,0,0.430846795465598,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,1.32023555829129,0.885905678642318,0,2.06742634534577,0.363533729477506,0.356497378384721,1.26414703174326,2.10837217149998,5.15677716240934,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0.608929898229199,0.938686832254841,0,0,0,0.322928853391811,0.241251699712623,0.358117032009409,0.492422699235184,0,0.370850604021019,1.02522528478712,0.412773735926445,1.48155621895769,2.26042148405629,1.6403307326523,0.457556346413045,0,0.279902904647316,0.138199973804424,0.954670618015114,0,0.406638934253697,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,3.38215763210514,0.149516546043979,0.66183396182839,1.75006069509643,3.09983576346555,1.68956125490778,0.704143431874524,2.21347454234715,4.19437377702843,4.1069300540421,2.59227005632079,2.21207784439725,0.405450430580328,0.513554785824136,1.55904987573354,1.07416017400489,1.39076948346885,1.32214994471966,1.77227432609493,1.51449674922221,1.600342939755,1.41156659191577,1.36441033035653,0.865906574762965,1.40252282617883,0,0.665957860122194,2.9605572681127,0.839423081820392,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.518936737920883,0,0.341467211508268,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.34461281373368,0,0.115884325944855,0,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.145346416632329,0,0.338458431566706,0,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0.220591419119515,0
|short_description=p4@Cxxc1
}}
}}

Latest revision as of 17:19, 1 October 2015

Short description:p4@Cxxc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cxxc1_5end
Coexpression cluster:NA
Association with transcript: -21bp_to_ENSMUST00000025444_5end
EntrezGene:Cxxc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cxxc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
body cavity6.66e-1237
body cavity or lining6.66e-1237
body cavity precursor1.78e-1138
anatomical cavity4.53e-1139
hemopoietic organ8.29e-1129
immune organ8.29e-1129
testis9.96e-0914
mixed endoderm/mesoderm-derived structure2.27e-0835
male reproductive organ4.88e-0815
hematopoietic system5.07e-0845
blood island5.07e-0845
male organism1.95e-0716
male reproductive system1.95e-0716
thymus2.19e-0723
neck2.19e-0723
respiratory system epithelium2.19e-0723
hemolymphoid system gland2.19e-0723
pharyngeal epithelium2.19e-0723
thymic region2.19e-0723
pharyngeal gland2.19e-0723
entire pharyngeal arch endoderm2.19e-0723
thymus primordium2.19e-0723
early pharyngeal endoderm2.19e-0723
hemolymphoid system2.79e-0748
immune system2.79e-0748
segment of respiratory tract4.24e-0727
pharynx5.49e-0724
gland of gut5.49e-0724
upper respiratory tract5.49e-0724
chordate pharynx5.49e-0724
pharyngeal arch system5.49e-0724
pharyngeal region of foregut5.49e-0724
external genitalia6.63e-0717
indifferent external genitalia6.63e-0717
indifferent gonad6.63e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:74375754..74375763,%2B&oldid=4313623"