FFCP PHASE1:Mm9::chr13:55122833..55122846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212032 | |EntrezGene=212032 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TRM8,E9Q3Z4 | |UniProt=Q3TRM8,E9Q3Z4 | ||
|association_with_transcript=-87bp_to_ENSMUST00000052949,NM_001033245,NM_001206392_5end | |association_with_transcript=-87bp_to_ENSMUST00000052949,NM_001033245,NM_001206392_5end | ||
|cluster_id=chr13:55122833..55122846,- | |||
|description=CAGE_peak_3_at_Hk3_5end | |description=CAGE_peak_3_at_Hk3_5end | ||
|id=chr13:55122833..55122846,- | |id=chr13:55122833..55122846,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.53e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!7.85e-08!3;DOID:4045!7.85e-08!3 | |ontology_enrichment_disease=DOID:0060100!7.85e-08!3;DOID:4045!7.85e-08!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.78e-21,3;DOID:4045,1.78e-21,3;DOID:0050686,4.72e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0007823!5.07e-10!5;UBERON:0000981!1.77e-08!4;UBERON:0002495!1.77e-08!4;UBERON:0003608!1.77e-08!4;UBERON:0003826!1.77e-08!4;UBERON:0008202!1.77e-08!4;UBERON:0004375!1.77e-08!4;UBERON:0002428!1.77e-08!4;UBERON:0003464!1.77e-08!4;UBERON:0003606!1.77e-08!4;UBERON:0009749!1.77e-08!4;UBERON:0003860!1.77e-08!4;UBERON:0005856!1.77e-08!4;UBERON:0005866!1.77e-08!4;UBERON:0007828!1.77e-08!4;UBERON:0005254!1.77e-08!4;UBERON:0001271!1.77e-08!4;UBERON:0002091!1.77e-08!4;UBERON:0001464!1.77e-08!4;UBERON:0003285!1.77e-08!4;UBERON:0010129!1.77e-08!4;UBERON:0006234!1.77e-08!4;UBERON:0002529!2.78e-08!6;UBERON:0002106!8.18e-08!6;UBERON:0004457!8.18e-08!6;UBERON:0000042!8.18e-08!6;UBERON:0004854!8.18e-08!6;UBERON:0009034!8.18e-08!6;UBERON:0002095!8.18e-08!6;UBERON:0004782!8.18e-08!6;UBERON:0003281!8.18e-08!6;UBERON:0009664!8.18e-08!6;UBERON:0002296!8.18e-08!6;UBERON:0005602!8.18e-08!6;UBERON:0001179!8.18e-08!6;UBERON:0006293!8.18e-08!6;UBERON:0000914!8.06e-07!17;UBERON:0005418!9.11e-07!5;UBERON:0002472!9.11e-07!5;UBERON:0008784!9.11e-07!5;UBERON:0006058!9.11e-07!5;UBERON:0004709!9.11e-07!5;UBERON:0005420!9.11e-07!5;UBERON:0006057!9.11e-07!5;UBERON:0000978!9.11e-07!5;UBERON:0002103!9.11e-07!5;UBERON:0000376!9.11e-07!5;UBERON:0000154!9.11e-07!5;UBERON:0005730!9.11e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.53e-07,9;UBERON:0002036,1.53e-07,9;UBERON:0002385,1.53e-07,9;UBERON:0000486,1.53e-07,9;UBERON:0007503,1.53e-07,9;UBERON:0001015,1.53e-07,9;UBERON:0002329,1.53e-07,9;UBERON:0003082,1.53e-07,9;UBERON:0003059,1.53e-07,9;UBERON:0007282,1.53e-07,9;UBERON:0004290,1.53e-07,9;UBERON:0009618,1.53e-07,9;UBERON:0000383,7.76e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0192396905299,11.720030167857,21.9879972468995,22.9410280332096,24.589637458504,29.1306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0,1.7972268675888,0,1.52484272487678,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0,0.457556346413045,2.88963330989554,2.79902904647316,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.0192396905299,11.720030167857,21.9879972468995,22.9410280332096,24.589637458504,29.1306211818692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,0,0,0,0,1.7972268675888,0,1.52484272487678,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.50925170356284,0.287696137450811,0.648540907100142,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0,0.457556346413045,2.88963330989554,2.79902904647316,3.17859939750175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0.476293691283074,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p3@Hk3 | |short_description=p3@Hk3 | ||
}} | }} |
Latest revision as of 18:29, 1 October 2015
Short description: | p3@Hk3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hk3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -87bp_to_ENSMUST00000052949, NM_001033245, NM_001206392_5end |
EntrezGene: | Hk3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.53e-07 | 9 |
striated muscle tissue | 1.53e-07 | 9 |
muscle tissue | 1.53e-07 | 9 |
multilaminar epithelium | 1.53e-07 | 9 |
epithelial vesicle | 1.53e-07 | 9 |
musculature | 1.53e-07 | 9 |
somite | 1.53e-07 | 9 |
myotome | 1.53e-07 | 9 |
presomitic mesoderm | 1.53e-07 | 9 |
presumptive segmental plate | 1.53e-07 | 9 |
dermomyotome | 1.53e-07 | 9 |
trunk paraxial mesoderm | 1.53e-07 | 9 |
musculature of body | 7.76e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.78e-21 | 3 |
muscle cancer | 1.78e-21 | 3 |
organ system cancer | 4.72e-11 | 6 |