FFCP PHASE1:Mm9::chr18:80452988..80453036,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66943|HGNC=|UniProt=Q80XM9|association_with_transcript=0bp_to_ENSMUST00000129043,ENSMUST00000151677_5end|description=CAGE_peak_1_at_Pqlc1_5end|id=chr18:80452988..80453036,+|ontology_enrichment_celltype=CL:0000117!1.15e-08!23;CL:0000337!1.15e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!2.03e-11!122;UBERON:0000025!6.94e-11!114;UBERON:0002365!6.39e-08!25;UBERON:0002330!6.39e-08!25;UBERON:0002107!2.36e-07!22;UBERON:0007499!2.36e-07!22;UBERON:0006925!2.36e-07!22;UBERON:0009497!2.36e-07!22;UBERON:0000015!2.36e-07!22;UBERON:0002423!2.36e-07!22;UBERON:0006235!2.36e-07!22;UBERON:0008835!2.36e-07!22;UBERON:0003894!2.36e-07!22;UBERON:0004161!2.36e-07!22;UBERON:0008836!2.36e-07!22;UBERON:0000477!2.37e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.03e-11,122;UBERON:0000025,6.93e-11,114;UBERON:0002365,6.39e-08,25;UBERON:0002330,6.39e-08,25;UBERON:0002107,2.36e-07,22;UBERON:0007499,2.36e-07,22;UBERON:0006925,2.36e-07,22;UBERON:0009497,2.36e-07,22;UBERON:0000015,2.36e-07,22;UBERON:0002423,2.36e-07,22;UBERON:0006235,2.36e-07,22;UBERON:0008835,2.36e-07,22;UBERON:0003894,2.36e-07,22;UBERON:0004161,2.36e-07,22;UBERON:0008836,2.36e-07,22|phase1_expression=6.72625157840135,0.348975407639361,0.909998478779072,0,0,4.19698179779725,2.10251376535973,3.61545305636414,9.29205566201001,8.42632294759177,4.79410311031414,5.58405112967355,3.76641605848653,5.42006494997784,9.66018309265422,13.5658429151183,19.5877325875881,5.36285681109004,6.30726394586398,8.48779303596061,5.44277056966847,1.58865521921416,4.17919662622297,1.27993938234725,0.91763712426868,1.14846392823004,0.430761996159075,1.07735616342945,0.950117097281869,1.51218077855958,3.10422714917427,8.25539875497521,12.3012957516914,0,4.33277429626912,4.48833542467929,5.3084032628216,15.0671387065287,7.813353445238,7.85285615960697,15.8822501768374,10.9287277593351,18.934903768215,3.65100772129174,3.85232338634155,3.48738829107195,3.9119567217402,3.48840250208714,1.75748946187577,3.11087838518853,2.93971485413261,2.87505128729943,9.06026072711776,6.5282592781021,6.04968838456435,1.80081605225163,2.57880095944881,5.15672092277442,6.47412674750713,12.1667925232568,7.60597684207415,2.71075625655306,1.77858959222228,4.49949858640699,1.97773272513395,4.2628806896766,5.39280198933128,6.91592949578798,4.25127410464758,9.18040380655497,5.25812403378455,6.28432165688368,5.52171352379034,6.61450315760752,7.57179221044067,10.1114066527102,9.91042928994498,6.51205424234457,7.83393319606842,12.265424758908,10.8870295886867,9.37644067002168,8.09630697104005,6.19038871034848,8.25110537994775,4.71405736757868,6.97621235915604,9.31997229126503,3.93776205332557,2.79614772395106,8.11620568364698,17.2084775396277,2.719885334831,9.71465744948071,9.09686984426737,6.2723764193627,5.33688796500657,3.2381761289831,6.23486411046885,2.47337702157238,4.78867627240714,3.84979432242953,2.54805239706646,7.11066703153331,2.59789249213457,2.78695852022608,3.0331466700887,6.50848114398642,2.07150306917737,4.45326417194474,2.77576522825817,3.65358573974569,3.22861696158482,3.61734337326294,2.3517741427141,4.27266410520897,2.96633961281249,3.32578520915797,7.07688441559899,5.17653919831709,4.63767188766826,4.363877278217,1.86391761218122,9.07620470735796,12.1479089951804,2.04365644166873,5.63131085177825,5.99902730993408,5.59108999121485,5.84183493678809,3.66000482254901,9.5497307605777,4.34560800480691,4.85859368927628,5.81806524766768,4.70499662896497,3.66621709861139,5.59831367745419,7.58168275301024,2.52530227063769,1.82168620147785,3.44853156650209,1.80062129805349,4.67184935290717,3.81004395247436,2.43416068541215,2.81105173679186,2.58703370739016,1.5089759505299,3.21480336285293,2.28736461413134,2.6303487891309,3.05851974148158,3.1342694986995,2.26360350048738,2.7864797354589,3.51106593656617,3.08817488537658,3.40996199274711,4.76389276831654,3.75241695969754,3.42117916775928,4.49814997611899,4.32881309844288,5.09081472528348,3.72054311600653,7.24338183778972,7.94004328096752,5.26591519723137,5.41752631461014,6.32336714457675,9.79539915749726,4.39100230582101,9.12603647570528,7.14985825118033,5.55684906848136,0.660837565967596,1.05780226665418,2.55945900642281,3.48355007790658,2.96395161040815,2.01683524623343,2.2237804384487,2.09248188723815,1.89811624617805,2.30578536613615,3.01602250560323,2.98434708061726,2.53453313254856,3.59527763461689,1.51296634912286,2.19055400579804,3.03468641524931,2.62771579002376,6.76246414038483,2.64746726198909,1.55161989734101,3.22624771495465,6.13394410105296,4.57591458736767,6.12295038581362,7.28043267138623,5.03969466048153,5.17219827719892,5.70021085828289,7.19558759631532,5.07150303471257,7.95884627182976,6.3656462945355,5.4662266115654,10.5387897403773,9.33508804839477,8.62609239164127,8.18710084870708,8.7370548472077,7.57736633841335,5.74071723270119,15.4381926836277,6.46636165583116,4.35830247072115,4.72598431681875,3.56464680127895,1.87752198630802,4.02015017860358,4.99891645860629,5.26860849216057,4.72905432318573,5.09368786192182,8.13219320153184,6.22680595919804,7.08008425650172,6.79850575333104,4.52373851817817,0.54390568381871,4.91764273019036,6.89841865761831,5.9403718295483,3.98519734413491,2.29508923527346,5.80683132570058,2.52406575533005,1.95219372148319,1.29254038639679,1.19484398976276,1.33679204449436,2.54768877709949,2.02405350837447,1.75353514746787,0.790575555893047,5.14114106274891,5.39372323791421,3.91744328067962,3.74640006513225,4.12425307431339,3.98235415019888,3.64170954232472,4.23252979750651,4.14931175462976,3.2483208216885,1.84461088766356,4.39328098385976,5.08947221268508,6.41695281092498,4.10847785316561,8.4334886859999,5.15677716240934,14.2984634416591,2.52085531643834,2.71653235943784,4.07240366560025,6.38424841112185,8.02659679209317,8.88564711251453,15.8321773539592,2.3467170806371,3.81297727554876,2.8668691747145,7.74965388824956,3.39075296061402,3.37752379597673,4.8942661041286,4.43180429311665,0.874442509889552,4.07935664423121,9.3978984438819,2.47664241555867,3.88908507476395,12.9974235333237,8.61173634642459,12.1252431799457,8.83887835968048,7.13752406850656,7.18639863783004,2.86401185404534,3.47969592939249,2.43983360552218,3.99619761040665,2.50905955217362,3.27543845619266,4.5853877770839,4.54594006489348,7.59092231753686,5.57344385154709,7.45607175704311,8.45539408026285,3.58839710505549,3.64008679005615,5.05573089694524,5.29555276258697,4.56181538825101,6.92407708009948,4.4269490846943,3.35549902162275,1.44950472495604,10.0810502190253,0.948033361884535,2.63542779877213,1.95150818613172,1.03936658382236,1.43221356533985,1.98681354781265,2.76449533895928,1.62458479892035,2.62512769865184,2.97206545954499,2.82313318383153,2.63136277997332,2.69393156592922,2.33753804363138,3.85441652145859,2.44184548711471,2.15313255862742,1.00730769818447,7.53439416725543,1.87682475451182,2.93042598827624,5.35920947697665,3.51100472824754,2.25900737046827,4.14292712856459,2.29158205375759,4.1244763762485,4.11049511862385,4.5323633843382,2.70009000092722,3.60256962579376,1.81256963593682,4.14208249401456,1.03787347584177,3.99024873401031,5.29274177837816,5.83456120963906,2.93458427679175,1.65459157605013,3.55594764482584,5.35691148821125,5.45562656306086,4.54854981174835,5.32306529769503,4.33840585187975,5.05664140337365,4.86591158277006,3.79074095107048,1.90517476513229,4.86714168968393,4.24400285020151,4.12085900803307,3.09117732282234,2.74295401908332,4.2594193478241,3.81497903915713,3.48831399917588,4.42314087952054,5.4153349050673,4.93905526756486,3.94604567156764,4.88894809845102,3.36685362994643,4.1522256343461,5.1222330835293,4.09231043169689,4.49316839439301,3.47231899766054,5.24602213669686,3.50897412668113,3.43793686477277,6.50380329034067,4.63241980150983,5.56482805489012|short_description=p1@Pqlc1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66943 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q80XM9 | |||
|association_with_transcript=0bp_to_ENSMUST00000129043,ENSMUST00000151677_5end | |||
|cluster_id=chr18:80452988..80453036,+ | |||
|description=CAGE_peak_1_at_Pqlc1_5end | |||
|id=chr18:80452988..80453036,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.15e-08!23;CL:0000337!1.15e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-08,23;CL:0000337,1.15e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.03e-11!122;UBERON:0000025!6.94e-11!114;UBERON:0002365!6.39e-08!25;UBERON:0002330!6.39e-08!25;UBERON:0002107!2.36e-07!22;UBERON:0007499!2.36e-07!22;UBERON:0006925!2.36e-07!22;UBERON:0009497!2.36e-07!22;UBERON:0000015!2.36e-07!22;UBERON:0002423!2.36e-07!22;UBERON:0006235!2.36e-07!22;UBERON:0008835!2.36e-07!22;UBERON:0003894!2.36e-07!22;UBERON:0004161!2.36e-07!22;UBERON:0008836!2.36e-07!22;UBERON:0000477!2.37e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.03e-11,122;UBERON:0000025,6.93e-11,114;UBERON:0002365,6.39e-08,25;UBERON:0002330,6.39e-08,25;UBERON:0002107,2.36e-07,22;UBERON:0007499,2.36e-07,22;UBERON:0006925,2.36e-07,22;UBERON:0009497,2.36e-07,22;UBERON:0000015,2.36e-07,22;UBERON:0002423,2.36e-07,22;UBERON:0006235,2.36e-07,22;UBERON:0008835,2.36e-07,22;UBERON:0003894,2.36e-07,22;UBERON:0004161,2.36e-07,22;UBERON:0008836,2.36e-07,22 | |||
|phase1_expression=6.72625157840135,0.348975407639361,0.909998478779072,0,0,4.19698179779725,2.10251376535973,3.61545305636414,9.29205566201001,8.42632294759177,4.79410311031414,5.58405112967355,3.76641605848653,5.42006494997784,9.66018309265422,13.5658429151183,19.5877325875881,5.36285681109004,6.30726394586398,8.48779303596061,5.44277056966847,1.58865521921416,4.17919662622297,1.27993938234725,0.91763712426868,1.14846392823004,0.430761996159075,1.07735616342945,0.950117097281869,1.51218077855958,3.10422714917427,8.25539875497521,12.3012957516914,0,4.33277429626912,4.48833542467929,5.3084032628216,15.0671387065287,7.813353445238,7.85285615960697,15.8822501768374,10.9287277593351,18.934903768215,3.65100772129174,3.85232338634155,3.48738829107195,3.9119567217402,3.48840250208714,1.75748946187577,3.11087838518853,2.93971485413261,2.87505128729943,9.06026072711776,6.5282592781021,6.04968838456435,1.80081605225163,2.57880095944881,5.15672092277442,6.47412674750713,12.1667925232568,7.60597684207415,2.71075625655306,1.77858959222228,4.49949858640699,1.97773272513395,4.2628806896766,5.39280198933128,6.91592949578798,4.25127410464758,9.18040380655497,5.25812403378455,6.28432165688368,5.52171352379034,6.61450315760752,7.57179221044067,10.1114066527102,9.91042928994498,6.51205424234457,7.83393319606842,12.265424758908,10.8870295886867,9.37644067002168,8.09630697104005,6.19038871034848,8.25110537994775,4.71405736757868,6.97621235915604,9.31997229126503,3.93776205332557,2.79614772395106,8.11620568364698,17.2084775396277,2.719885334831,9.71465744948071,9.09686984426737,6.2723764193627,5.33688796500657,3.2381761289831,6.23486411046885,2.47337702157238,4.78867627240714,3.84979432242953,2.54805239706646,7.11066703153331,2.59789249213457,2.78695852022608,3.0331466700887,6.50848114398642,2.07150306917737,4.45326417194474,2.77576522825817,3.65358573974569,3.22861696158482,3.61734337326294,2.3517741427141,4.27266410520897,2.96633961281249,3.32578520915797,7.07688441559899,5.17653919831709,4.63767188766826,4.363877278217,1.86391761218122,9.07620470735796,12.1479089951804,2.04365644166873,5.63131085177825,5.99902730993408,5.59108999121485,5.84183493678809,3.66000482254901,9.5497307605777,4.34560800480691,4.85859368927628,5.81806524766768,4.70499662896497,3.66621709861139,5.59831367745419,7.58168275301024,2.52530227063769,1.82168620147785,3.44853156650209,1.80062129805349,4.67184935290717,3.81004395247436,2.43416068541215,2.81105173679186,2.58703370739016,1.5089759505299,3.21480336285293,2.28736461413134,2.6303487891309,3.05851974148158,3.1342694986995,2.26360350048738,2.7864797354589,3.51106593656617,3.08817488537658,3.40996199274711,4.76389276831654,3.75241695969754,3.42117916775928,4.49814997611899,4.32881309844288,5.09081472528348,3.72054311600653,7.24338183778972,7.94004328096752,5.26591519723137,5.41752631461014,6.32336714457675,9.79539915749726,4.39100230582101,9.12603647570528,7.14985825118033,5.55684906848136,0.660837565967596,1.05780226665418,2.55945900642281,3.48355007790658,2.96395161040815,2.01683524623343,2.2237804384487,2.09248188723815,1.89811624617805,2.30578536613615,3.01602250560323,2.98434708061726,2.53453313254856,3.59527763461689,1.51296634912286,2.19055400579804,3.03468641524931,2.62771579002376,6.76246414038483,2.64746726198909,1.55161989734101,3.22624771495465,6.13394410105296,4.57591458736767,6.12295038581362,7.28043267138623,5.03969466048153,5.17219827719892,5.70021085828289,7.19558759631532,5.07150303471257,7.95884627182976,6.3656462945355,5.4662266115654,10.5387897403773,9.33508804839477,8.62609239164127,8.18710084870708,8.7370548472077,7.57736633841335,5.74071723270119,15.4381926836277,6.46636165583116,4.35830247072115,4.72598431681875,3.56464680127895,1.87752198630802,4.02015017860358,4.99891645860629,5.26860849216057,4.72905432318573,5.09368786192182,8.13219320153184,6.22680595919804,7.08008425650172,6.79850575333104,4.52373851817817,0.54390568381871,4.91764273019036,6.89841865761831,5.9403718295483,3.98519734413491,2.29508923527346,5.80683132570058,2.52406575533005,1.95219372148319,1.29254038639679,1.19484398976276,1.33679204449436,2.54768877709949,2.02405350837447,1.75353514746787,0.790575555893047,5.14114106274891,5.39372323791421,3.91744328067962,3.74640006513225,4.12425307431339,3.98235415019888,3.64170954232472,4.23252979750651,4.14931175462976,3.2483208216885,1.84461088766356,4.39328098385976,5.08947221268508,6.41695281092498,4.10847785316561,8.4334886859999,5.15677716240934,14.2984634416591,2.52085531643834,2.71653235943784,4.07240366560025,6.38424841112185,8.02659679209317,8.88564711251453,15.8321773539592,2.3467170806371,3.81297727554876,2.8668691747145,7.74965388824956,3.39075296061402,3.37752379597673,4.8942661041286,4.43180429311665,0.874442509889552,4.07935664423121,9.3978984438819,2.47664241555867,3.88908507476395,12.9974235333237,8.61173634642459,12.1252431799457,8.83887835968048,7.13752406850656,7.18639863783004,2.86401185404534,3.47969592939249,2.43983360552218,3.99619761040665,2.50905955217362,3.27543845619266,4.5853877770839,4.54594006489348,7.59092231753686,5.57344385154709,7.45607175704311,8.45539408026285,3.58839710505549,3.64008679005615,5.05573089694524,5.29555276258697,4.56181538825101,6.92407708009948,4.4269490846943,3.35549902162275,1.44950472495604,10.0810502190253,0.948033361884535,2.63542779877213,1.95150818613172,1.03936658382236,1.43221356533985,1.98681354781265,2.76449533895928,1.62458479892035,2.62512769865184,2.97206545954499,2.82313318383153,2.63136277997332,2.69393156592922,2.33753804363138,3.85441652145859,2.44184548711471,2.15313255862742,1.00730769818447,7.53439416725543,1.87682475451182,2.93042598827624,5.35920947697665,3.51100472824754,2.25900737046827,4.14292712856459,2.29158205375759,4.1244763762485,4.11049511862385,4.5323633843382,2.70009000092722,3.60256962579376,1.81256963593682,4.14208249401456,1.03787347584177,3.99024873401031,5.29274177837816,5.83456120963906,2.93458427679175,1.65459157605013,3.55594764482584,5.35691148821125,5.45562656306086,4.54854981174835,5.32306529769503,4.33840585187975,5.05664140337365,4.86591158277006,3.79074095107048,1.90517476513229,4.86714168968393,4.24400285020151,4.12085900803307,3.09117732282234,2.74295401908332,4.2594193478241,3.81497903915713,3.48831399917588,4.42314087952054,5.4153349050673,4.93905526756486,3.94604567156764,4.88894809845102,3.36685362994643,4.1522256343461,5.1222330835293,4.09231043169689,4.49316839439301,3.47231899766054,5.24602213669686,3.50897412668113,3.43793686477277,6.50380329034067,4.63241980150983,5.56482805489012 | |||
|short_description=p1@Pqlc1 | |||
}} |
Latest revision as of 18:34, 1 October 2015
Short description: | p1@Pqlc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pqlc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129043, ENSMUST00000151677_5end |
EntrezGene: | Pqlc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.15e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.03e-11 | 122 |
tube | 6.93e-11 | 114 |
exocrine gland | 6.39e-08 | 25 |
exocrine system | 6.39e-08 | 25 |
liver | 2.36e-07 | 22 |
epithelial sac | 2.36e-07 | 22 |
digestive gland | 2.36e-07 | 22 |
epithelium of foregut-midgut junction | 2.36e-07 | 22 |
anatomical boundary | 2.36e-07 | 22 |
hepatobiliary system | 2.36e-07 | 22 |
foregut-midgut junction | 2.36e-07 | 22 |
hepatic diverticulum | 2.36e-07 | 22 |
liver primordium | 2.36e-07 | 22 |
septum transversum | 2.36e-07 | 22 |
liver bud | 2.36e-07 | 22 |