FFCP PHASE1:Mm9::chr8:13200576..13200636,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:13200576..13200636,- to FFCP PHASE1:Mm9::chr8:13200576..13200636,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66790 | |EntrezGene=66790 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D3N8 | |UniProt=Q9D3N8 | ||
|association_with_transcript=0bp_to_ENSMUST00000080568,ENSMUST00000081917,ENSMUST00000165605,NM_025768,uc009kxd.1,uc012fzv.1_5end | |||
|cluster_id=chr8:13200576..13200636,- | |||
|description=CAGE_peak_1_at_Grtp1_5end | |||
|id=chr8:13200576..13200636,- | |||
|ontology_enrichment_celltype=CL:0002563!8.23e-07!9;CL:0002251!8.23e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.90e-07,9;CL:0002251,7.90e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.51e-19!43;UBERON:0005409!4.75e-18!59;UBERON:0000344!1.07e-10!15;UBERON:0001242!1.48e-09!13;UBERON:0000060!1.48e-09!13;UBERON:0001262!1.48e-09!13;UBERON:0004786!1.48e-09!13;UBERON:0000485!1.35e-07!11;UBERON:0004923!3.09e-07!24;UBERON:0003350!8.23e-07!9;UBERON:0004808!8.23e-07!9;UBERON:0001277!8.23e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.66e-18,31;UBERON:0005409,3.10e-16,47;UBERON:0000344,9.93e-11,15;UBERON:0001242,1.39e-09,13;UBERON:0001262,1.39e-09,13;UBERON:0004786,1.39e-09,13;UBERON:0000485,1.28e-07,11;UBERON:0004923,2.96e-07,24;UBERON:0003350,7.90e-07,9;UBERON:0004808,7.90e-07,9;UBERON:0001277,7.90e-07,9 | |||
|phase1_expression=15.8547358633746,41.528073509084,41.4049307844478,45.9745601186382,39.0698669358151,39.1158703554703,39.7141489012394,1.80772652818207,0.140788722151667,0,0,0,0,0.174840804837995,4.33042690360362,2.63217847606774,2.79824751251259,0,0.137114433605739,0,7.65389611359628,0.297872853602656,0,32.1584769814747,39.2289870624861,36.1766137392463,42.2146756235893,40.0776492795754,63.6578455178853,51.6661766007858,59.4237768556217,10.1604907753541,12.916360539276,0,35.2398976096555,32.5819904902645,28.787879232994,0,0.7813353445238,0,0,0,0,2.39203954153597,1.52065396829272,0.183546752161682,3.12956537739216,5.23260375313072,6.37089929929968,2.91644848611425,4.33957907038624,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,0.515672092277442,5.66486090406874,6.34789175126439,8.87363964908651,1.0165335962074,6.22506357277798,0.449949858640699,0,0.7104801149461,3.59520132622086,3.45796474789399,11.0947885170071,10.5304631898719,10.3059231062177,14.568200204594,8.39300455616131,6.49201235839256,5.75072826109418,10.1114066527102,1.10115880999389,2.93680877595932,2.61131106535614,11.3422207447967,11.161492519494,9.89735404057844,5.58365998002762,8.4414391504752,5.19514042441154,8.83885756421003,6.54909731675874,5.59198337475902,0.151452386666368,0.377857800533928,1.44932244350839,16.3480536626463,6.79971333707751,21.0484244738749,27.9403859502498,27.7776670000348,10.1119982494861,0,0,0,13.9434985578914,0,0,0,1.5154372870785,3.80039798212648,2.52762222507392,17.8126852361734,0,5.78924342352817,1.73485326766136,3.04465478312141,4.38169444786511,5.12456977878917,3.99801604261396,8.04266184509923,63.2819117399997,5.49477556295664,2.65383165584962,2.10296904931632,1.98757366614354,1.93950101254089,24.2309289583559,0.878342391034642,1.8850203613211,34.4867024531598,0.359445373517761,0.599902730993408,0,2.24685959107234,3.66000482254901,4.14659361972453,1.21677024134594,3.3243009452943,3.53239675751252,2.27137768294861,4.27725328171328,2.48813941220186,3.53811861807145,17.8875577503503,4.68433594665733,4.82794419310293,2.52086981727489,4.9732589885786,4.42237244483631,2.69038812598185,4.40398105430725,33.114031454594,3.66465587985832,6.42960672570586,3.69497360744293,4.16471891612392,2.22437799380478,2.089512999133,1.23469281844766,4.97585667046233,0,0,0,7.87077935634907,5.8631514995274,6.84235833551856,5.20838418287463,5.3126342571799,5.707883176833,3.48800917125612,5.09719462659276,3.03589890154641,3.29119699826961,2.62667942526552,1.29710095273369,1.60819986167866,2.41505126820156,0.671032093801859,1.05144974282064,9.98174740079059,54.5190991923267,32.5274196996159,4.26576501070468,6.50262681209228,11.5980715189884,15.5296313959974,22.4601824283319,27.0120389079834,23.7264530772256,31.6221993070101,45.2403375840485,45.5610320974235,40.3575660336579,24.268124033664,35.2305021295752,38.0359831915841,4.1726938209678,4.79843752960861,7.88954149711563,4.48032921259691,5.62462212786115,7.85521182771568,10.2443190141297,11.9564219863478,15.5428740562961,19.3733547357227,20.4552312690133,3.67059232575407,3.73462090715086,3.82265591054251,4.05720242777006,4.82354319504834,6.3656462945355,3.16465751195892,4.21551589615092,7.68771956926628,8.62609239164127,6.69853705803306,7.48890415474945,10.6083128737787,13.9929982547091,29.9114983245288,11.2699446001629,2.84237117655727,2.60743962307241,1.69745085775188,1.17345124144251,1.67506257441816,1.90434912708811,0.975668239288994,0.630540576424764,1.32878813789265,2.39182152986231,8.84861899464985,7.59813920209941,9.54683786637976,1.50791283939272,0,8.35999264132362,3.31124095565679,3.69266356971921,3.39913891117389,0,1.00988370881749,3.78609863299508,6.24701990874622,7.97066571611356,5.25731355495614,5.34716817797746,2.83076530788832,3.23848561339915,5.26060544240361,3.55759000151871,2.89189184779626,6.67118400478862,4.27357448801413,3.4206261464251,3.79431282836832,6.63725691699814,5.82673526771955,8.16273603804828,4.71512699389745,4.72483028609236,4.91896236710284,13.6966995379157,9.08834323693764,7.12994756769443,4.42451461110142,7.37930260024991,11.3449097573006,3.74483566329167,6.30213829109586,7.24408629183425,7.07312215604255,4.61084607469911,5.17269571046005,3.1264313914403,3.04464949114599,4.69343416127421,10.1679394014634,1.32317038832977,3.46261131177108,2.42196640043858,2.95533332147964,2.98430860007841,5.58079059133208,31.7714111926537,2.96680483216816,1.53783792718067,3.714963623338,1.66675074632741,4.1441060541032,2.32380187125743,2.74533807847827,0.509935289981566,0.419854356970974,0.414599921413271,22.9120948323627,4.74503990371703,5.69294507955176,9.39646465149671,6.48173717644853,7.86105229486239,6.74321731924104,9.58780086413897,11.5172614472973,48.6056149844223,3.10669656543463,1.69107881605257,5.38259565758324,6.12196414691261,3.50012139019286,3.87479470433193,3.37912250981556,4.10750335260139,5.208175393758,5.87212328783981,1.20792060413003,2.88030006257865,0.632022241256357,3.04087822935246,1.43795340030758,0.51968329191118,0.179026695667481,0.79472541912506,0.600977247599844,1.03382669022204,0.504832249740738,0.609654453239999,1.00826185136841,0.38983152295901,0.0962118416403295,0.701261413089414,2.0405734525369,1.55390167361845,3.22969883794113,3.02192309455341,6.37525660306228,4.69206188627955,5.67770035228522,5.57357785605571,1.50471631210609,2.25900737046827,4.14292712856459,1.71868654031819,3.43706364687375,4.7955776383945,3.0215755895588,2.02506750069542,1.35096360967266,5.89085131679466,4.65984280576638,3.32119512269365,7.18244772121856,4.26834014385335,3.8897074730927,3.14419743941973,3.12533964365024,3.11145418922261,3.7086310303001,4.49286893428541,4.04315538822076,4.30914809813408,5.28153755881013,3.83930180626518,3.90553429669703,4.36509564062661,5.71552429539688,4.75125736373908,3.6652751888104,1.64834360321323,2.79677948255355,5.82877729055206,4.79184676630211,3.57654284920981,3.77900683244054,5.17601592284318,3.9768865709088,4.024415403201,3.94604567156764,5.97538100921792,3.92799590160417,4.50813068871862,4.62971067165148,4.91077251803627,4.02835787083512,4.43685205256625,5.49583271463481,5.6143586026898,5.58664740525576,2.67803664896381,3.75005412503176,3.70988536992674 | |phase1_expression=15.8547358633746,41.528073509084,41.4049307844478,45.9745601186382,39.0698669358151,39.1158703554703,39.7141489012394,1.80772652818207,0.140788722151667,0,0,0,0,0.174840804837995,4.33042690360362,2.63217847606774,2.79824751251259,0,0.137114433605739,0,7.65389611359628,0.297872853602656,0,32.1584769814747,39.2289870624861,36.1766137392463,42.2146756235893,40.0776492795754,63.6578455178853,51.6661766007858,59.4237768556217,10.1604907753541,12.916360539276,0,35.2398976096555,32.5819904902645,28.787879232994,0,0.7813353445238,0,0,0,0,2.39203954153597,1.52065396829272,0.183546752161682,3.12956537739216,5.23260375313072,6.37089929929968,2.91644848611425,4.33957907038624,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,0.515672092277442,5.66486090406874,6.34789175126439,8.87363964908651,1.0165335962074,6.22506357277798,0.449949858640699,0,0.7104801149461,3.59520132622086,3.45796474789399,11.0947885170071,10.5304631898719,10.3059231062177,14.568200204594,8.39300455616131,6.49201235839256,5.75072826109418,10.1114066527102,1.10115880999389,2.93680877595932,2.61131106535614,11.3422207447967,11.161492519494,9.89735404057844,5.58365998002762,8.4414391504752,5.19514042441154,8.83885756421003,6.54909731675874,5.59198337475902,0.151452386666368,0.377857800533928,1.44932244350839,16.3480536626463,6.79971333707751,21.0484244738749,27.9403859502498,27.7776670000348,10.1119982494861,0,0,0,13.9434985578914,0,0,0,1.5154372870785,3.80039798212648,2.52762222507392,17.8126852361734,0,5.78924342352817,1.73485326766136,3.04465478312141,4.38169444786511,5.12456977878917,3.99801604261396,8.04266184509923,63.2819117399997,5.49477556295664,2.65383165584962,2.10296904931632,1.98757366614354,1.93950101254089,24.2309289583559,0.878342391034642,1.8850203613211,34.4867024531598,0.359445373517761,0.599902730993408,0,2.24685959107234,3.66000482254901,4.14659361972453,1.21677024134594,3.3243009452943,3.53239675751252,2.27137768294861,4.27725328171328,2.48813941220186,3.53811861807145,17.8875577503503,4.68433594665733,4.82794419310293,2.52086981727489,4.9732589885786,4.42237244483631,2.69038812598185,4.40398105430725,33.114031454594,3.66465587985832,6.42960672570586,3.69497360744293,4.16471891612392,2.22437799380478,2.089512999133,1.23469281844766,4.97585667046233,0,0,0,7.87077935634907,5.8631514995274,6.84235833551856,5.20838418287463,5.3126342571799,5.707883176833,3.48800917125612,5.09719462659276,3.03589890154641,3.29119699826961,2.62667942526552,1.29710095273369,1.60819986167866,2.41505126820156,0.671032093801859,1.05144974282064,9.98174740079059,54.5190991923267,32.5274196996159,4.26576501070468,6.50262681209228,11.5980715189884,15.5296313959974,22.4601824283319,27.0120389079834,23.7264530772256,31.6221993070101,45.2403375840485,45.5610320974235,40.3575660336579,24.268124033664,35.2305021295752,38.0359831915841,4.1726938209678,4.79843752960861,7.88954149711563,4.48032921259691,5.62462212786115,7.85521182771568,10.2443190141297,11.9564219863478,15.5428740562961,19.3733547357227,20.4552312690133,3.67059232575407,3.73462090715086,3.82265591054251,4.05720242777006,4.82354319504834,6.3656462945355,3.16465751195892,4.21551589615092,7.68771956926628,8.62609239164127,6.69853705803306,7.48890415474945,10.6083128737787,13.9929982547091,29.9114983245288,11.2699446001629,2.84237117655727,2.60743962307241,1.69745085775188,1.17345124144251,1.67506257441816,1.90434912708811,0.975668239288994,0.630540576424764,1.32878813789265,2.39182152986231,8.84861899464985,7.59813920209941,9.54683786637976,1.50791283939272,0,8.35999264132362,3.31124095565679,3.69266356971921,3.39913891117389,0,1.00988370881749,3.78609863299508,6.24701990874622,7.97066571611356,5.25731355495614,5.34716817797746,2.83076530788832,3.23848561339915,5.26060544240361,3.55759000151871,2.89189184779626,6.67118400478862,4.27357448801413,3.4206261464251,3.79431282836832,6.63725691699814,5.82673526771955,8.16273603804828,4.71512699389745,4.72483028609236,4.91896236710284,13.6966995379157,9.08834323693764,7.12994756769443,4.42451461110142,7.37930260024991,11.3449097573006,3.74483566329167,6.30213829109586,7.24408629183425,7.07312215604255,4.61084607469911,5.17269571046005,3.1264313914403,3.04464949114599,4.69343416127421,10.1679394014634,1.32317038832977,3.46261131177108,2.42196640043858,2.95533332147964,2.98430860007841,5.58079059133208,31.7714111926537,2.96680483216816,1.53783792718067,3.714963623338,1.66675074632741,4.1441060541032,2.32380187125743,2.74533807847827,0.509935289981566,0.419854356970974,0.414599921413271,22.9120948323627,4.74503990371703,5.69294507955176,9.39646465149671,6.48173717644853,7.86105229486239,6.74321731924104,9.58780086413897,11.5172614472973,48.6056149844223,3.10669656543463,1.69107881605257,5.38259565758324,6.12196414691261,3.50012139019286,3.87479470433193,3.37912250981556,4.10750335260139,5.208175393758,5.87212328783981,1.20792060413003,2.88030006257865,0.632022241256357,3.04087822935246,1.43795340030758,0.51968329191118,0.179026695667481,0.79472541912506,0.600977247599844,1.03382669022204,0.504832249740738,0.609654453239999,1.00826185136841,0.38983152295901,0.0962118416403295,0.701261413089414,2.0405734525369,1.55390167361845,3.22969883794113,3.02192309455341,6.37525660306228,4.69206188627955,5.67770035228522,5.57357785605571,1.50471631210609,2.25900737046827,4.14292712856459,1.71868654031819,3.43706364687375,4.7955776383945,3.0215755895588,2.02506750069542,1.35096360967266,5.89085131679466,4.65984280576638,3.32119512269365,7.18244772121856,4.26834014385335,3.8897074730927,3.14419743941973,3.12533964365024,3.11145418922261,3.7086310303001,4.49286893428541,4.04315538822076,4.30914809813408,5.28153755881013,3.83930180626518,3.90553429669703,4.36509564062661,5.71552429539688,4.75125736373908,3.6652751888104,1.64834360321323,2.79677948255355,5.82877729055206,4.79184676630211,3.57654284920981,3.77900683244054,5.17601592284318,3.9768865709088,4.024415403201,3.94604567156764,5.97538100921792,3.92799590160417,4.50813068871862,4.62971067165148,4.91077251803627,4.02835787083512,4.43685205256625,5.49583271463481,5.6143586026898,5.58664740525576,2.67803664896381,3.75005412503176,3.70988536992674 | ||
|short_description=p1@Grtp1 | |||
}} | }} |
Latest revision as of 18:50, 1 October 2015
Short description: | p1@Grtp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Grtp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000080568, ENSMUST00000081917, ENSMUST00000165605, NM_025768, uc009kxd.1, uc012fzv.1_5end |
EntrezGene: | Grtp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.90e-07 | 9 |
epithelial cell of alimentary canal | 7.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.66e-18 | 31 |
gastrointestinal system | 3.10e-16 | 47 |
mucosa | 9.93e-11 | 15 |
intestinal mucosa | 1.39e-09 | 13 |
wall of intestine | 1.39e-09 | 13 |
gastrointestinal system mucosa | 1.39e-09 | 13 |
simple columnar epithelium | 1.28e-07 | 11 |
organ component layer | 2.96e-07 | 24 |
epithelium of mucosa | 7.90e-07 | 9 |
gastrointestinal system epithelium | 7.90e-07 | 9 |
intestinal epithelium | 7.90e-07 | 9 |