FFCP PHASE1:Mm9::chr6:83087097..83087115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20166 | |EntrezGene=20166 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=263 | |||
|TSSclassifier=NA | |||
|UniProt=E9PU97,Q8C6B2 | |UniProt=E9PU97,Q8C6B2 | ||
|association_with_transcript=0bp_to_ENSMUST00000087938_5end | |association_with_transcript=0bp_to_ENSMUST00000087938_5end | ||
|cluster_id=chr6:83087097..83087115,+ | |||
|description=CAGE_peak_9_at_Rtkn_5end | |description=CAGE_peak_9_at_Rtkn_5end | ||
|id=chr6:83087097..83087115,+ | |id=chr6:83087097..83087115,+ | ||
|ontology_enrichment_celltype=CL:0002321!9.37e-11!70;CL:0000220!9.37e-11!70;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!5.84e-10!43;CL:0000055!6.19e-09!50;CL:0000333!7.65e-09!10;CL:0000095!7.65e-09!10;CL:0000243!7.65e-09!10;CL:0000123!7.65e-09!10;CL:0000125!7.65e-09!10;CL:0000030!7.65e-09!10;CL:0000339!7.65e-09!10;CL:0000107!4.14e-08!9;CL:0002453!3.74e-07!8 | |ontology_enrichment_celltype=CL:0002321!9.37e-11!70;CL:0000220!9.37e-11!70;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0002319!5.84e-10!43;CL:0000055!6.19e-09!50;CL:0000333!7.65e-09!10;CL:0000095!7.65e-09!10;CL:0000243!7.65e-09!10;CL:0000123!7.65e-09!10;CL:0000125!7.65e-09!10;CL:0000030!7.65e-09!10;CL:0000339!7.65e-09!10;CL:0000107!4.14e-08!9;CL:0002453!3.74e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.44e-25,44;CL:0000133,1.44e-25,44;CL:0002321,4.46e-24,70;CL:0002319,9.94e-24,43;CL:0000333,1.17e-19,10;CL:0000095,1.17e-19,10;CL:0000243,1.17e-19,10;CL:0000123,1.17e-19,10;CL:0000125,1.17e-19,10;CL:0000030,1.17e-19,10;CL:0000339,1.17e-19,10;CL:0000107,1.25e-17,9;CL:0002453,1.14e-14,8;CL:0000128,1.54e-14,6;CL:0000126,1.54e-14,6;CL:0000127,1.54e-14,6;CL:0000540,4.90e-10,33;CL:0000047,4.90e-10,33;CL:0000031,4.90e-10,33;CL:0000404,4.90e-10,33;CL:0000393,2.18e-09,39;CL:0000211,2.18e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.48e-12!102;UBERON:0000924!1.48e-12!102;UBERON:0006601!1.48e-12!102;UBERON:0000073!1.82e-11!75;UBERON:0001016!1.82e-11!75;UBERON:0001017!2.97e-10!73;UBERON:0005743!2.97e-10!73;UBERON:0000010!8.35e-10!11;UBERON:0002410!4.14e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.10e-22,11;UBERON:0001016,6.99e-19,75;UBERON:0002410,1.25e-17,9;UBERON:0001017,5.39e-16,73;UBERON:0004121,5.34e-15,95;UBERON:0000924,5.34e-15,95;UBERON:0006601,5.34e-15,95;UBERON:0000011,2.80e-09,3;UBERON:0010313,6.06e-08,3;UBERON:0002342,6.06e-08,3;UBERON:0002005,6.06e-08,3;UBERON:0005428,6.06e-08,3;UBERON:0005062,6.06e-08,3;UBERON:0011216,1.91e-07,194;UBERON:0003076,3.97e-07,12;UBERON:0003057,3.97e-07,12;UBERON:0004733,5.77e-07,6;UBERON:0004732,5.77e-07,6;UBERON:0002028,5.77e-07,6;UBERON:0007277,5.77e-07,6 | |||
|phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,1.56478268869608,1.30815093828268,1.97717564461025,1.36100929351998,1.1198913730029,1.43752564364972,0,0,0,1.02903774414379,0,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,0.103689612308478,0,0,0.285650984403804,1.32521124570968,0.122490799214954,0,0,0,0.893811366596314,1.0752457327937,0,0.0914876436024097,0,1.11673199600552,0,1.22238598221448,0.589257170947335,0.142371680799103,0,4.39211921332468,3.32514864469856,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0.35333957451034,1.83096445709685,1.28326477414318,2.54805239706646,0,0.865964164044856,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,0,0,0,1.0389402227978,1.46017136760982,0.101839363850316,0.248813941220186,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0,0.657587197282725,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,1.44495530989013,1.75817529888305,0.163934945376675,0.504941854408746,1.89304931649754,1.17131623288992,1.29254038639679,4.30143836314594,3.56477878531831,4.24614796183249,1.21443210502468,2.33804686329049,0.790575555893047,0.642642632843614,0,0.35613120733451,0,0,0,1.21390318077491,0.302323556964751,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.820704498725306,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0,0.192423683280659,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0,0.17230640686684,0,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=1.12104192973356,1.04692622291808,1.36499771816861,0,0,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.639969691173627,0.91763712426868,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,1.56478268869608,1.30815093828268,1.97717564461025,1.36100929351998,1.1198913730029,1.43752564364972,0,0,0,1.02903774414379,0,0,0,0,0,1.0165335962074,0.889294796111139,0,0,0,0.898800331555214,1.92109152660777,0.103689612308478,0,0,0.285650984403804,1.32521124570968,0.122490799214954,0,0,0,0.893811366596314,1.0752457327937,0,0.0914876436024097,0,1.11673199600552,0,1.22238598221448,0.589257170947335,0.142371680799103,0,4.39211921332468,3.32514864469856,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0.35333957451034,1.83096445709685,1.28326477414318,2.54805239706646,0,0.865964164044856,0.253359865475099,1.01104889002957,0,0,0,0,0,0,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.898743836428936,0.915001205637253,0,0,0,1.0389402227978,1.46017136760982,0.101839363850316,0.248813941220186,0,0.420883711772948,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.431135985865684,0,0,0.657587197282725,0,0,0.411564272815887,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.630869845692382,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0.827810238914197,1.44495530989013,1.75817529888305,0.163934945376675,0.504941854408746,1.89304931649754,1.17131623288992,1.29254038639679,4.30143836314594,3.56477878531831,4.24614796183249,1.21443210502468,2.33804686329049,0.790575555893047,0.642642632843614,0,0.35613120733451,0,0,0,1.21390318077491,0.302323556964751,0,0.295301892880773,0,0,0.727067458955011,0.356497378384721,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.180938774784468,0.238744688006273,0.820704498725306,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.247960367176008,0.785267825952089,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0,0.192423683280659,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0,0.17230640686684,0,0,0,0,0,0.685738504770831,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p9@Rtkn | |short_description=p9@Rtkn | ||
}} | }} |
Latest revision as of 18:56, 1 October 2015
Short description: | p9@Rtkn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rtkn_5end |
Coexpression cluster: | MCL_coexpression_mm9:263 |
Association with transcript: | 0bp_to_ENSMUST00000087938_5end |
EntrezGene: | Rtkn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.44e-25 | 44 |
neurectodermal cell | 1.44e-25 | 44 |
embryonic cell | 4.46e-24 | 70 |
neural cell | 9.94e-24 | 43 |
migratory neural crest cell | 1.17e-19 | 10 |
neuron associated cell | 1.17e-19 | 10 |
glial cell (sensu Vertebrata) | 1.17e-19 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-19 | 10 |
glial cell | 1.17e-19 | 10 |
glioblast | 1.17e-19 | 10 |
glioblast (sensu Vertebrata) | 1.17e-19 | 10 |
autonomic neuron | 1.25e-17 | 9 |
oligodendrocyte precursor cell | 1.14e-14 | 8 |
oligodendrocyte | 1.54e-14 | 6 |
macroglial cell | 1.54e-14 | 6 |
astrocyte | 1.54e-14 | 6 |
neuron | 4.90e-10 | 33 |
neuronal stem cell | 4.90e-10 | 33 |
neuroblast | 4.90e-10 | 33 |
electrically signaling cell | 4.90e-10 | 33 |
electrically responsive cell | 2.18e-09 | 39 |
electrically active cell | 2.18e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.10e-22 | 11 |
nervous system | 6.99e-19 | 75 |
autonomic nervous system | 1.25e-17 | 9 |
central nervous system | 5.39e-16 | 73 |
ectoderm-derived structure | 5.34e-15 | 95 |
ectoderm | 5.34e-15 | 95 |
presumptive ectoderm | 5.34e-15 | 95 |
parasympathetic nervous system | 2.80e-09 | 3 |
neural crest-derived structure | 6.06e-08 | 3 |
neural crest | 6.06e-08 | 3 |
enteric nervous system | 6.06e-08 | 3 |
vagal neural crest | 6.06e-08 | 3 |
neural fold | 6.06e-08 | 3 |
organ system subdivision | 1.91e-07 | 194 |
posterior neural tube | 3.97e-07 | 12 |
chordal neural plate | 3.97e-07 | 12 |
segmental subdivision of hindbrain | 5.77e-07 | 6 |
segmental subdivision of nervous system | 5.77e-07 | 6 |
hindbrain | 5.77e-07 | 6 |
presumptive hindbrain | 5.77e-07 | 6 |