FFCP PHASE1:Mm9::chrX:166417161..166417185,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=654820|HGNC=|UniProt=|association_with_transcript=-312bp_to_ENSMUST00000154810,NR_029457,uc009uyi.1_5end|description=CAGE_peak_1_at_G530011O06Rik_5end|id=chrX:166417161..166417185,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.16e-10!63;UBERON:0000955!4.04e-09!50;UBERON:0006238!4.04e-09!50;UBERON:0002616!1.37e-08!49;UBERON:0004121!2.59e-08!102;UBERON:0000924!2.59e-08!102;UBERON:0006601!2.59e-08!102;UBERON:0002346!6.52e-08!71;UBERON:0003075!6.52e-08!71;UBERON:0007284!6.52e-08!71;UBERON:0000468!1.49e-07!333;UBERON:0001049!1.92e-07!52;UBERON:0005068!1.92e-07!52;UBERON:0006241!1.92e-07!52;UBERON:0007135!1.92e-07!52;UBERON:0004111!6.08e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.88e-12,51;UBERON:0000073,9.95e-12,54;UBERON:0000955,1.35e-11,47;UBERON:0006238,1.35e-11,47;UBERON:0002616,9.65e-11,46;UBERON:0001049,2.68e-10,52;UBERON:0005068,2.68e-10,52;UBERON:0006241,2.68e-10,52;UBERON:0007135,2.68e-10,52;UBERON:0010314,2.88e-10,92;UBERON:0001017,1.07e-08,73;UBERON:0010371,2.56e-08,73;UBERON:0002346,2.87e-08,64;UBERON:0003075,2.87e-08,64;UBERON:0007284,2.87e-08,64;UBERON:0001016,3.27e-08,75;UBERON:0004121,4.38e-08,95;UBERON:0000924,4.38e-08,95;UBERON:0006601,4.38e-08,95;UBERON:0003080,1.38e-07,40;UBERON:0000025,3.02e-07,114;UBERON:0004111,3.80e-07,122;UBERON:0002780,7.07e-07,39;UBERON:0001890,7.07e-07,39;UBERON:0006240,7.07e-07,39|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,0,0.765389611359628,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.30815093828268,0.219686182734472,1.36100929351998,0.55994568650145,0,0.671130424230945,0,0,2.82985379639542,2.57880095944881,1.03134418455488,0,2.11596391708813,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0,0.571301968807607,0.662605622854841,0.244981598429908,0.0958454710182364,0,6.60695285996332,1.40456071893706,2.4577045320999,0.263772575460388,0.182975287204819,0,0.837548997004143,1.68828783009504,3.81995619442025,0.589257170947335,1.13897344639282,0,0,0.529000920747499,0.579728977403356,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,11.6522047641227,1.03909497345377,0.520455980298408,0.608930956624282,0.922461989024234,1.3565037649736,0.940709657085638,0.376999773989026,0.741584903203122,4.77177877835708,1.76922110389975,0.647067399789637,0.441683036920787,1.45462575940567,0,4.68449275218475,4.39838084308256,0.766371165625774,0,0,0.254140454146129,4.34392854273986,4.11750542536764,0.376963056338593,3.47648640384553,8.69432554923124,4.1557608911912,3.0825839982874,1.2220723662038,2.48813941220186,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.900310649026746,1.65775299619287,0.95251098811859,0.640568601424249,0.562210347358373,1.55222022443409,0.215567992932842,0,0.527853372491847,0.219195732427575,1.66828349535359,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,1.18372367792605,0.983821158737019,0.771335564436891,1.39520366850245,0.804820204198858,0.817357396570186,0.16455984991348,2.46251196118643,1.29710095273369,2.63159977365598,0.658650345873152,2.95254121272818,3.15434922846191,1.13195073617213,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,1.25667604400135,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.49095073923223,0.505892296994058,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.863088412352432,0.810676133875177,0,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,0.964887042726734,1.29327233116623,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0,0.476087281772027,0.195133647857799,0.315270288212382,1.32878813789265,0.318909537314974,0.655453258862952,0.690739927463582,1.01254341007058,0,0,2.95058563811422,1.37968373152366,2.72936002979246,4.57125577709592,0,1.26235463602186,0.315508219416257,0,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0,4.81981974632711,3.97432238583152,0.890328018336276,1.30309567482861,2.14461159864296,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0.632073515871632,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.77340233642274,0.356737635204141,1.31639216481697,0.913394847343798,0,0.42366414172764,0.441056796109924,1.81374878235628,0.807322133479528,0.784068024066026,0.119372344003136,0.492422699235184,0,2.03967832211561,1.70870880797853,0.412773735926445,0.370389054739423,0.753473828018764,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0.954670618015114,0,0.609958401380546,0.972048067396211,0.836353184057875,0.436725127492355,0.674321731924103,1.1571483801547,0.785267825952089,1.03691978633434,0.621339313086926,0,0.747582730219894,0.165458490457098,0.777804753376191,0.645799117388655,1.85851738039856,1.99507305697782,1.8228613878153,1.04859344425711,1.20792060413003,1.15212002503146,1.26404448251271,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.198681354781265,0.240390899039938,0,0.302899349844443,0.609654453239999,0.302478555410522,0.682205165178267,0.673482891482306,3.3894301632655,2.26730383615211,0,0,0.167884616364078,1.73870634628971,1.31377732815827,1.09890974560359,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,5.67115501734169,2.05524755931193,3.0215755895588,1.35004500046361,6.30449684513909,3.62513927187364,2.5888015587591,0,0,0.170733605754134,0.486213434136588,0.838452650511929,0.735374033800057,0.44449345560323,1.03017528619447,0,0.758091635291392,0.760437899670719,0.377252682772152,1.03005658216871,0.576226371643824,0.918967503289812,0,0.695305955669133,1.35036454324594,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,0.564656282491984,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0,4.08255002691767,0.765153328275374,0.882365676478062,1.85494268496337|short_description=p1@G530011O06Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=654820 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-312bp_to_ENSMUST00000154810,NR_029457,uc009uyi.1_5end | |||
|cluster_id=chrX:166417161..166417185,- | |||
|description=CAGE_peak_1_at_G530011O06Rik_5end | |||
|id=chrX:166417161..166417185,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.16e-10!63;UBERON:0000955!4.04e-09!50;UBERON:0006238!4.04e-09!50;UBERON:0002616!1.37e-08!49;UBERON:0004121!2.59e-08!102;UBERON:0000924!2.59e-08!102;UBERON:0006601!2.59e-08!102;UBERON:0002346!6.52e-08!71;UBERON:0003075!6.52e-08!71;UBERON:0007284!6.52e-08!71;UBERON:0000468!1.49e-07!333;UBERON:0001049!1.92e-07!52;UBERON:0005068!1.92e-07!52;UBERON:0006241!1.92e-07!52;UBERON:0007135!1.92e-07!52;UBERON:0004111!6.08e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.88e-12,51;UBERON:0000073,9.95e-12,54;UBERON:0000955,1.35e-11,47;UBERON:0006238,1.35e-11,47;UBERON:0002616,9.65e-11,46;UBERON:0001049,2.68e-10,52;UBERON:0005068,2.68e-10,52;UBERON:0006241,2.68e-10,52;UBERON:0007135,2.68e-10,52;UBERON:0010314,2.88e-10,92;UBERON:0001017,1.07e-08,73;UBERON:0010371,2.56e-08,73;UBERON:0002346,2.87e-08,64;UBERON:0003075,2.87e-08,64;UBERON:0007284,2.87e-08,64;UBERON:0001016,3.27e-08,75;UBERON:0004121,4.38e-08,95;UBERON:0000924,4.38e-08,95;UBERON:0006601,4.38e-08,95;UBERON:0003080,1.38e-07,40;UBERON:0000025,3.02e-07,114;UBERON:0004111,3.80e-07,122;UBERON:0002780,7.07e-07,39;UBERON:0001890,7.07e-07,39;UBERON:0006240,7.07e-07,39 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.315462165358238,0.685572168028694,0,0.765389611359628,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,1.30815093828268,0.219686182734472,1.36100929351998,0.55994568650145,0,0.671130424230945,0,0,2.82985379639542,2.57880095944881,1.03134418455488,0,2.11596391708813,0,0,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0.768436610643109,0.103689612308478,0.405017814995072,0,0.571301968807607,0.662605622854841,0.244981598429908,0.0958454710182364,0,6.60695285996332,1.40456071893706,2.4577045320999,0.263772575460388,0.182975287204819,0,0.837548997004143,1.68828783009504,3.81995619442025,0.589257170947335,1.13897344639282,0,0,0.529000920747499,0.579728977403356,0,0,0.539703191637817,0,0,1.82577746171277,0,0,0,0.704217098883403,0,0,0,0,0,0,0.34255163915718,11.6522047641227,1.03909497345377,0.520455980298408,0.608930956624282,0.922461989024234,1.3565037649736,0.940709657085638,0.376999773989026,0.741584903203122,4.77177877835708,1.76922110389975,0.647067399789637,0.441683036920787,1.45462575940567,0,4.68449275218475,4.39838084308256,0.766371165625774,0,0,0.254140454146129,4.34392854273986,4.11750542536764,0.376963056338593,3.47648640384553,8.69432554923124,4.1557608911912,3.0825839982874,1.2220723662038,2.48813941220186,0.252722758433675,0.420883711772948,0.130120442962704,0.689706313300419,0.900310649026746,1.65775299619287,0.95251098811859,0.640568601424249,0.562210347358373,1.55222022443409,0.215567992932842,0,0.527853372491847,0.219195732427575,1.66828349535359,1.0447564995665,2.26360350048738,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,1.18372367792605,0.983821158737019,0.771335564436891,1.39520366850245,0.804820204198858,0.817357396570186,0.16455984991348,2.46251196118643,1.29710095273369,2.63159977365598,0.658650345873152,2.95254121272818,3.15434922846191,1.13195073617213,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,1.25667604400135,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,0,0.228497025219458,1.1270773567308,0.203651327845314,0,0.49095073923223,0.505892296994058,0.147610147979602,0.470996183524124,0.616985819609003,0,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.863088412352432,0.810676133875177,0,0,0.744281895337007,0.312037673114561,0.757736633841335,0.358794827043824,0.964887042726734,1.29327233116623,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0,0.476087281772027,0.195133647857799,0.315270288212382,1.32878813789265,0.318909537314974,0.655453258862952,0.690739927463582,1.01254341007058,0,0,2.95058563811422,1.37968373152366,2.72936002979246,4.57125577709592,0,1.26235463602186,0.315508219416257,0,0,0.477937595905104,0.445597348164788,0,0,0.292255857911312,0,4.81981974632711,3.97432238583152,0.890328018336276,1.30309567482861,2.14461159864296,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.258428293168221,1.09060118843252,0.356497378384721,0.632073515871632,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0.643011105094777,1.77340233642274,0.356737635204141,1.31639216481697,0.913394847343798,0,0.42366414172764,0.441056796109924,1.81374878235628,0.807322133479528,0.784068024066026,0.119372344003136,0.492422699235184,0,2.03967832211561,1.70870880797853,0.412773735926445,0.370389054739423,0.753473828018764,0.410082683163076,0.457556346413045,0,0.139951452323658,0,0.954670618015114,0,0.609958401380546,0.972048067396211,0.836353184057875,0.436725127492355,0.674321731924103,1.1571483801547,0.785267825952089,1.03691978633434,0.621339313086926,0,0.747582730219894,0.165458490457098,0.777804753376191,0.645799117388655,1.85851738039856,1.99507305697782,1.8228613878153,1.04859344425711,1.20792060413003,1.15212002503146,1.26404448251271,0.202725215290164,0.308132871494482,0.389762468933385,0.537080087002444,0.198681354781265,0.240390899039938,0,0.302899349844443,0.609654453239999,0.302478555410522,0.682205165178267,0.673482891482306,3.3894301632655,2.26730383615211,0,0,0.167884616364078,1.73870634628971,1.31377732815827,1.09890974560359,0.214368379079066,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,5.67115501734169,2.05524755931193,3.0215755895588,1.35004500046361,6.30449684513909,3.62513927187364,2.5888015587591,0,0,0.170733605754134,0.486213434136588,0.838452650511929,0.735374033800057,0.44449345560323,1.03017528619447,0,0.758091635291392,0.760437899670719,0.377252682772152,1.03005658216871,0.576226371643824,0.918967503289812,0,0.695305955669133,1.35036454324594,0.412085900803307,0.294397840268795,0.342869252385415,0.70990322463735,0.715308569841963,0.581385666529314,0.564656282491984,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.197008964751127,0,0.154936841185966,0.771626443924566,0,0,4.08255002691767,0.765153328275374,0.882365676478062,1.85494268496337 | |||
|short_description=p1@G530011O06Rik | |||
}} |
Latest revision as of 19:01, 1 October 2015
Short description: | p1@G530011O06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_G530011O06Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -312bp_to_ENSMUST00000154810, NR_029457, uc009uyi.1_5end |
EntrezGene: | G530011O06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 9.88e-12 | 51 |
regional part of nervous system | 9.95e-12 | 54 |
brain | 1.35e-11 | 47 |
future brain | 1.35e-11 | 47 |
regional part of brain | 9.65e-11 | 46 |
neural tube | 2.68e-10 | 52 |
neural rod | 2.68e-10 | 52 |
future spinal cord | 2.68e-10 | 52 |
neural keel | 2.68e-10 | 52 |
structure with developmental contribution from neural crest | 2.88e-10 | 92 |
central nervous system | 1.07e-08 | 73 |
ecto-epithelium | 2.56e-08 | 73 |
neurectoderm | 2.87e-08 | 64 |
neural plate | 2.87e-08 | 64 |
presumptive neural plate | 2.87e-08 | 64 |
nervous system | 3.27e-08 | 75 |
ectoderm-derived structure | 4.38e-08 | 95 |
ectoderm | 4.38e-08 | 95 |
presumptive ectoderm | 4.38e-08 | 95 |
anterior neural tube | 1.38e-07 | 40 |
tube | 3.02e-07 | 114 |
anatomical conduit | 3.80e-07 | 122 |
regional part of forebrain | 7.07e-07 | 39 |
forebrain | 7.07e-07 | 39 |
future forebrain | 7.07e-07 | 39 |