FFCP PHASE1:Mm9::chr5:122286819..122286854,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:122286819..122286854,-
|short_description=p1@Sh2b3
|description=CAGE_peak_1_at_Sh2b3_5end
|association_with_transcript=0bp_to_ENSMUST00000040308,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16923 | |EntrezGene=16923 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2223 | |||
|TSSclassifier=NA | |||
|UniProt=O09039,D3Z3Y5,D6RCY9 | |UniProt=O09039,D3Z3Y5,D6RCY9 | ||
|association_with_transcript=0bp_to_ENSMUST00000040308,ENSMUST00000118580,ENSMUST00000136960,ENSMUST00000167396_5end | |||
|cluster_id=chr5:122286819..122286854,- | |||
|description=CAGE_peak_1_at_Sh2b3_5end | |||
|id=chr5:122286819..122286854,- | |||
|ontology_enrichment_celltype=CL:0002320!9.88e-13!46;CL:0000134!9.88e-13!46;CL:0000988!2.69e-12!32;CL:0002032!2.69e-12!32;CL:0000037!2.69e-12!32;CL:0000566!2.69e-12!32;CL:0000837!2.69e-12!32;CL:0002031!4.73e-11!25;CL:0000049!2.99e-09!19;CL:0000219!3.46e-08!54;CL:0000063!3.77e-08!66;CL:0000763!9.68e-08!16;CL:0000839!2.08e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,9.88e-13,46;CL:0000134,9.88e-13,46;CL:0000988,2.69e-12,32;CL:0002032,2.69e-12,32;CL:0000037,2.69e-12,32;CL:0000837,2.69e-12,32;CL:0002031,4.73e-11,25;CL:0000049,2.99e-09,19;CL:0000219,3.46e-08,54;CL:0000763,9.68e-08,16;CL:0000839,2.08e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.88e-13!46;UBERON:0002204!3.57e-09!32;UBERON:0002371!3.20e-08!16;UBERON:0000926!2.41e-07!193;UBERON:0004120!2.41e-07!193;UBERON:0006603!2.41e-07!193;UBERON:0001474!3.72e-07!22;UBERON:0004765!3.72e-07!22;UBERON:0001434!3.72e-07!22;UBERON:0003081!8.15e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.88e-13,46;UBERON:0002204,3.57e-09,32;UBERON:0002371,3.20e-08,16;UBERON:0001474,3.72e-07,22;UBERON:0004765,3.72e-07,22;UBERON:0001434,3.72e-07,22 | |||
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|phase1_expression=5.92550734287738,21.287499866001,27.2999543633722,27.5242432289215,20.0358291978539,15.6127722878058,10.9797941079897,19.7558684865612,188.516098961082,225.638203374402,43.3181459610528,44.1937760834164,12.497653284978,18.2708641055705,19.6534759471241,23.28465574983,15.3903613188192,85.1747846467242,78.0181127216654,94.6388923509607,29.6801082627234,19.3617354841726,20.8959831311148,11.8394392867121,12.6175104586944,26.4146703492909,20.6765758156356,16.3758136841276,6.46079626151671,8.56902441183765,5.54326276638262,36.196748387199,28.2929802288902,31.6963362030877,9.53210345179206,7.97926297720763,10.2084678131185,53.9905803650611,31.253413780952,39.2642807980349,63.5290007073495,62.1571391312186,46.1234835379596,14.8558245211181,13.990016508293,11.1963518818626,20.342174953049,6.32272953503295,4.39372365468944,6.02732687130279,9.51907667052465,5.75010257459886,105.703041816374,18.1340535502836,20.8378155468328,27.7840190918823,20.6304076755905,21.6582278756526,4.24864567805155,3.1739458756322,5.70448263155561,22.0248945844936,14.2287167377782,92.2397210213434,118.663963508037,84.5471336785859,45.5392167987975,33.8112108682968,3.83651565541367,4.99521971827255,5.04779907243317,5.71301968807607,6.84692476950002,2.57230678351403,4.2172007248024,5.51531271966013,16.5173821499083,8.2996769755372,7.98753972932466,4.74790635828698,4.84884511092771,4.16730696445408,9.77140496504833,10.1297269805702,8.70950012327818,5.89257170947335,6.40672563595963,3.16879057903011,9.16286939331527,7.17929821014462,29.2763133588695,18.9293252935905,26.5188820146023,6.47643829965381,11.695975514058,12.9927797258227,16.7128859956785,13.2935651610885,12.9893002301434,9.54016851177919,3.38024207464033,14.115912515575,10.1922095882658,0,5.19578498426914,4.81383744402687,6.0662933401774,16.7850303187018,41.9479371508418,20.9303416081403,9.71517829890361,14.9188084372949,14.5287763271317,13.7157602902887,19.1669592631199,14.9543243682314,16.3148678704687,19.5209131841881,45.9997487013935,17.4708197943202,26.5009822152472,20.3647606316793,3.72783522436244,19.0307518057506,17.5935233723302,12.2619386500124,40.3776969584951,30.5950392806638,34.1818910826544,10.6351353977424,12.3525162761029,3.5183218591602,7.82209440865244,8.69432554923124,9.3504620051802,7.46309810111685,13.1372779366908,21.5224059155461,9.09801930361229,11.5743020737561,5.20481771850815,3.67843367093557,7.38254732201932,5.87748789559289,6.66757691683013,5.12454881139399,6.37171727006156,6.20888089773638,7.76044774558232,7.37513712654495,11.6127741948206,13.3709396780821,9.73165372289593,21.2433821578522,12.9642745937004,10.5488161413801,14.0442637462647,18.7863972193742,30.1213309359328,20.0911999359437,11.7263029990548,10.8037236876609,15.3884078130387,12.7896750635812,9.71882811190483,8.60375595576509,14.4867636755794,18.2153934092784,13.000228143165,16.2525789438304,19.5375831005512,18.2749984281665,16.9053588774109,16.238976670005,10.9350773253346,4.83651678182637,16.8513579321737,12.6936271998501,9.81125952462076,6.27039014023184,12.8867461322093,12.5043785266472,10.8965241483986,12.935342575654,14.7104009078799,12.0230236948528,13.3207660664143,14.523822459004,13.2575579241002,13.4822911298133,10.8069024937347,13.9398891278057,14.6044283733873,10.1681176222659,22.5415471346161,15.2738495883986,11.4431967428899,18.0950415317022,16.6944458008039,13.8753539100826,9.10592621479974,11.5993334086492,15.4155366085317,12.8470731401392,14.3488066432638,17.0895205412489,16.2288097110802,14.9529839046498,16.5506803657923,21.28951417136,22.5367965217299,8.78596522201861,14.3768206527355,17.8627654880882,14.6657706363843,9.59799736199025,8.25228102200796,17.3679667690812,30.6690295676564,10.0430448238357,14.9927778326664,12.7308814331391,11.2651319178481,24.9584323588305,32.1358915196119,38.6364622758442,24.9063527687782,25.9113686889067,28.2234940523752,27.529036872244,25.7300622980184,27.4833211304872,90.4747703635634,53.8466626980522,21.1458637398186,22.0749397043786,6.10092241953609,6.56385444916338,15.7377547561608,17.1680230498974,27.1337068697981,25.7689571235781,24.7736907392719,26.0475989768282,23.6166594527338,21.5138163399513,31.1704240289669,26.0107713541068,30.0418711239358,7.71171159412337,12.6326675835359,12.9987890677096,16.125808976004,16.8269525431986,9.2921596837974,10.4395673546642,9.97667737983678,10.9390946258421,10.9261700365886,14.7568871013085,16.2809824695979,11.9966130727577,8.91243445961803,12.009396801561,10.5418608574999,16.5016869197099,12.2558258071364,7.38250485528372,8.92574918101006,8.57348140126369,12.7684968222437,13.7343989553594,10.2020392773315,13.0919928119278,12.6722722354404,8.04961869282517,7.71849393192367,16.158852788265,16.3079070962865,9.16756458907969,7.99794704821014,8.86360858623331,15.1570035047522,10.0129663085675,32.6363382323899,26.4175190992925,26.8532064686082,21.0972671845254,28.1590109105312,23.3353736670653,49.1237662682242,45.9040763621598,56.5237892860093,15.2747298882418,15.5004636854756,19.51866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| ||
|short_description=p1@Sh2b3 | |||
}} | }} |
Latest revision as of 19:38, 1 October 2015
Short description: | p1@Sh2b3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh2b3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2223 |
Association with transcript: | 0bp_to_ENSMUST00000040308, ENSMUST00000118580, ENSMUST00000136960, ENSMUST00000167396_5end |
EntrezGene: | Sh2b3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 9.88e-13 | 46 |
mesenchymal cell | 9.88e-13 | 46 |
hematopoietic cell | 2.69e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.69e-12 | 32 |
hematopoietic stem cell | 2.69e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.69e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 4.73e-11 | 25 |
common myeloid progenitor | 2.99e-09 | 19 |
motile cell | 3.46e-08 | 54 |
myeloid cell | 9.68e-08 | 16 |
myeloid lineage restricted progenitor cell | 2.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.88e-13 | 46 |
musculoskeletal system | 3.57e-09 | 32 |
bone marrow | 3.20e-08 | 16 |
bone element | 3.72e-07 | 22 |
skeletal element | 3.72e-07 | 22 |
skeletal system | 3.72e-07 | 22 |