FFCP PHASE1:Mm9::chr5:122500142..122500167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13048 | |EntrezGene=13048 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=F6YIR2 | |UniProt=F6YIR2 | ||
|association_with_transcript=-31bp_to_ENSMUST00000154139_5end | |association_with_transcript=-31bp_to_ENSMUST00000154139_5end | ||
|cluster_id=chr5:122500142..122500167,- | |||
|description=CAGE_peak_2_at_Cux2_5end | |description=CAGE_peak_2_at_Cux2_5end | ||
|id=chr5:122500142..122500167,- | |id=chr5:122500142..122500167,- | ||
|ontology_enrichment_celltype=CL:0000540!1.67e-14!33;CL:0000047!1.67e-14!33;CL:0000031!1.67e-14!33;CL:0000404!1.67e-14!33;CL:0000117!8.11e-14!23;CL:0000337!8.11e-14!23;CL:0000221!2.62e-10!44;CL:0000133!2.62e-10!44;CL:0002319!6.87e-10!43;CL:0000393!5.22e-09!39;CL:0000211!5.22e-09!39 | |ontology_enrichment_celltype=CL:0000540!1.67e-14!33;CL:0000047!1.67e-14!33;CL:0000031!1.67e-14!33;CL:0000404!1.67e-14!33;CL:0000117!8.11e-14!23;CL:0000337!8.11e-14!23;CL:0000221!2.62e-10!44;CL:0000133!2.62e-10!44;CL:0002319!6.87e-10!43;CL:0000393!5.22e-09!39;CL:0000211!5.22e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.30e-15,33;CL:0000047,1.30e-15,33;CL:0000031,1.30e-15,33;CL:0000404,1.30e-15,33;CL:0000117,4.08e-15,23;CL:0000337,4.08e-15,23;CL:0000393,9.08e-11,39;CL:0000211,9.08e-11,39;CL:0000221,2.86e-10,44;CL:0000133,2.86e-10,44;CL:0002319,8.03e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.41e-26!73;UBERON:0005743!3.41e-26!73;UBERON:0000073!1.01e-24!75;UBERON:0001016!1.01e-24!75;UBERON:0002346!5.51e-23!71;UBERON:0003075!5.51e-23!71;UBERON:0007284!5.51e-23!71;UBERON:0001049!1.67e-21!52;UBERON:0005068!1.67e-21!52;UBERON:0006241!1.67e-21!52;UBERON:0007135!1.67e-21!52;UBERON:0004121!3.09e-21!102;UBERON:0000924!3.09e-21!102;UBERON:0006601!3.09e-21!102;UBERON:0000033!1.21e-20!63;UBERON:0000955!2.86e-20!50;UBERON:0006238!2.86e-20!50;UBERON:0002616!8.68e-20!49;UBERON:0003056!3.72e-18!49;UBERON:0003080!2.73e-17!40;UBERON:0002020!5.28e-17!34;UBERON:0002780!8.88e-17!39;UBERON:0001890!8.88e-17!39;UBERON:0006240!8.88e-17!39;UBERON:0002791!5.58e-14!29;UBERON:0003528!5.58e-14!29;UBERON:0001893!5.58e-14!29;UBERON:0000025!1.94e-11!114;UBERON:0004111!3.01e-11!122;UBERON:0000468!3.32e-10!333;UBERON:0000956!7.08e-10!21;UBERON:0001869!7.08e-10!21;UBERON:0000203!7.08e-10!21;UBERON:0007811!1.07e-08!86;UBERON:0000153!1.13e-08!94;UBERON:0000922!1.84e-08!328;UBERON:0002021!4.62e-08!10;UBERON:0000411!4.62e-08!10;UBERON:0001950!4.62e-08!10;UBERON:0002619!1.10e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!3.41e-26!73;UBERON:0005743!3.41e-26!73;UBERON:0000073!1.01e-24!75;UBERON:0001016!1.01e-24!75;UBERON:0002346!5.51e-23!71;UBERON:0003075!5.51e-23!71;UBERON:0007284!5.51e-23!71;UBERON:0001049!1.67e-21!52;UBERON:0005068!1.67e-21!52;UBERON:0006241!1.67e-21!52;UBERON:0007135!1.67e-21!52;UBERON:0004121!3.09e-21!102;UBERON:0000924!3.09e-21!102;UBERON:0006601!3.09e-21!102;UBERON:0000033!1.21e-20!63;UBERON:0000955!2.86e-20!50;UBERON:0006238!2.86e-20!50;UBERON:0002616!8.68e-20!49;UBERON:0003056!3.72e-18!49;UBERON:0003080!2.73e-17!40;UBERON:0002020!5.28e-17!34;UBERON:0002780!8.88e-17!39;UBERON:0001890!8.88e-17!39;UBERON:0006240!8.88e-17!39;UBERON:0002791!5.58e-14!29;UBERON:0003528!5.58e-14!29;UBERON:0001893!5.58e-14!29;UBERON:0000025!1.94e-11!114;UBERON:0004111!3.01e-11!122;UBERON:0000468!3.32e-10!333;UBERON:0000956!7.08e-10!21;UBERON:0001869!7.08e-10!21;UBERON:0000203!7.08e-10!21;UBERON:0007811!1.07e-08!86;UBERON:0000153!1.13e-08!94;UBERON:0000922!1.84e-08!328;UBERON:0002021!4.62e-08!10;UBERON:0000411!4.62e-08!10;UBERON:0001950!4.62e-08!10;UBERON:0002619!1.10e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.76e-28,92;UBERON:0001017,1.43e-27,73;UBERON:0001016,6.47e-26,75;UBERON:0000073,2.67e-24,54;UBERON:0002346,6.57e-23,64;UBERON:0003075,6.57e-23,64;UBERON:0007284,6.57e-23,64;UBERON:0001049,1.10e-22,52;UBERON:0005068,1.10e-22,52;UBERON:0006241,1.10e-22,52;UBERON:0007135,1.10e-22,52;UBERON:0004121,2.32e-21,95;UBERON:0000924,2.32e-21,95;UBERON:0006601,2.32e-21,95;UBERON:0003056,6.93e-20,49;UBERON:0000955,2.39e-19,47;UBERON:0006238,2.39e-19,47;UBERON:0003080,6.32e-19,40;UBERON:0002616,7.89e-19,46;UBERON:0010371,8.25e-19,73;UBERON:0002020,1.32e-18,34;UBERON:0002780,2.33e-18,39;UBERON:0001890,2.33e-18,39;UBERON:0006240,2.33e-18,39;UBERON:0003528,2.92e-15,29;UBERON:0002791,2.92e-15,29;UBERON:0001893,2.92e-15,29;UBERON:0000956,1.00e-10,21;UBERON:0001869,1.00e-10,21;UBERON:0000203,1.00e-10,21;UBERON:0000025,1.48e-10,114;UBERON:0004111,5.46e-10,122;UBERON:0002021,9.42e-09,10;UBERON:0000411,9.42e-09,10;UBERON:0001950,9.42e-09,10;UBERON:0002619,2.64e-08,17 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.439372365468944,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,7.28339259094552,7.40587370980846,6.97214543856797,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,7.25827286159344,7.2903206699113,5.67877395648731,8.56952953211411,7.28866185140325,6.00204916153275,7.3801012684042,2.75765635983006,5.50579404996943,6.76742891851495,8.44835932909339,6.19865552331911,6.67859798297591,8.85552729946492,4.18774498502071,6.75315132038016,5.19514042441154,5.59794312399969,5.83723891276322,8.76077395378913,0.075726193333184,0.0755715601067855,4.34796733052517,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,4.22530259330042,0,0,0,0,0,0,0.34255163915718,0,3.71105347662062,1.56136794089522,1.52232739156071,1.61430848079241,1.05505848386836,3.05730638552832,4.02133092254962,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,1.75668478206928,3.97948742945565,0.510914110417183,0,0,0,5.09288173976397,3.66000482254901,6.15706325353036,7.12679712788333,14.3200656104985,6.85700547046548,7.78758062725237,1.32391173005411,0.248813941220186,0.252722758433675,1.47309299120532,1.56144531555244,1.14951052216736,1.98068342785884,2.41127708537144,3.26575195926374,2.94661556655154,2.62364828767241,2.32833033665114,1.29340795759705,2.83659120251729,1.93546236580344,1.7535658594206,1.39023624612799,1.39300866608867,0.823128545631774,2.38841120182192,0,0,0,3.10688658803253,2.57978665979206,1.98068267607116,3.07768156260773,2.36117078096885,2.77680803197281,2.79040733700489,2.14618721119695,2.45207218971056,3.29119699826961,3.61168420974009,4.05344047729279,7.01759939641595,5.04965265169416,4.69722465661301,2.10289948564127,4.21908910755066,0,0,2.34617075588757,3.48355007790658,0.902072229254653,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.329397909448022,1.00534083520108,1.1937388322469,0.19496408711912,1.79763881730844,0,0.199141273254367,3.22435431620239,3.88444942873078,6.76246414038483,4.2766778847516,2.13347735884388,2.87556861550306,2.46622494784603,1.18088118383682,0.627994911365499,0.740382983530803,0,0.667380422864376,0.589676985339609,0.224862112384854,0.608580364165509,1.20588579876208,0.50925170356284,1.15078454980324,0.486405680325106,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0.482443521363367,1.10851914099963,1.51593129416388,1.30371981153621,1.86719594352707,0.469380496577004,1.67506257441816,1.42826184531608,1.56106918286239,0.945810864637146,1.32878813789265,1.43509291791738,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0.275936746304732,4.81651769963376,7.501547941901,0,0.504941854408746,1.26203287766503,0.390438744296638,1.72338718186239,2.86762557543062,3.11918143715352,2.54768877709949,2.83367491172426,3.21481443702443,2.76701444562566,4.17717711348349,0.425820255624806,2.84904965867608,2.93196526836437,0.329940245945071,1.32745138339963,3.15614827001476,3.93020624054176,1.50884063804718,1.18120757152309,2.45948118355142,2.58428293168221,1.45413491791002,0.356497378384721,2.84433082142234,1.05418608574999,4.12542172992747,2.04263763452273,2.52085531643834,3.62204314591713,3.00071849044229,3.3694644392032,2.67553226403106,1.31639216481697,3.34911444026059,0,0,0.220528398054962,0.16488625294148,0,0.361877549568935,0,0,0.582961673259701,3.33765543618917,0,1.03193433981611,0.740778109478847,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0.954670618015114,2.37251995185852,1.82987520414164,1.40406943068342,1.46361807210128,0.87345025498471,1.34864346384821,2.0663363931334,0.523511883968059,0.129614973291793,0,0,1.34564891439581,1.32366792365678,0.972255941720238,1.29159823477731,0.844780627453891,2.58185925020659,1.5624526181274,1.78260885523708,0.966336483304024,0.288030006257865,0,2.22997736819181,1.02710957164827,0.909445760844565,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0.358855426437903,0,0.965947970160952,0.187682475451182,0.36630324853453,0.428736758158132,3.51100472824754,7.90652579663893,9.20650473014354,10.3121192419091,9.96748457593388,8.90607275701835,11.3309084608455,8.77529250301348,7.20513925158753,8.15656336171568,7.7664046762773,2.17953429926771,3.99024873401031,1.70733605754134,3.16038732188782,2.30574478890781,2.20612210140017,1.33348036680969,1.44224540067226,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,2.06011316433741,2.24088033417042,1.66562859971278,1.90517476513229,2.54945517078682,1.35036454324594,0.824171801606613,0.883193520806384,1.37147700954166,1.06485483695602,3.09967046931517,2.61623549938191,1.12931256498397,1.4384483341585,1.64635175585495,1.57841826862706,1.49384525230448,1.68342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|phase1_expression=3.68342348341026,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0.221730510655305,0.635030673459631,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0.65407546914134,0.439372365468944,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,7.28339259094552,7.40587370980846,6.97214543856797,0.338844532069132,0,0,0,0,1.19840044207362,1.15265491596466,7.25827286159344,7.2903206699113,5.67877395648731,8.56952953211411,7.28866185140325,6.00204916153275,7.3801012684042,2.75765635983006,5.50579404996943,6.76742891851495,8.44835932909339,6.19865552331911,6.67859798297591,8.85552729946492,4.18774498502071,6.75315132038016,5.19514042441154,5.59794312399969,5.83723891276322,8.76077395378913,0.075726193333184,0.0755715601067855,4.34796733052517,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0,0,0,4.22530259330042,0,0,0,0,0,0,0.34255163915718,0,3.71105347662062,1.56136794089522,1.52232739156071,1.61430848079241,1.05505848386836,3.05730638552832,4.02133092254962,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,0,1.75668478206928,3.97948742945565,0.510914110417183,0,0,0,5.09288173976397,3.66000482254901,6.15706325353036,7.12679712788333,14.3200656104985,6.85700547046548,7.78758062725237,1.32391173005411,0.248813941220186,0.252722758433675,1.47309299120532,1.56144531555244,1.14951052216736,1.98068342785884,2.41127708537144,3.26575195926374,2.94661556655154,2.62364828767241,2.32833033665114,1.29340795759705,2.83659120251729,1.93546236580344,1.7535658594206,1.39023624612799,1.39300866608867,0.823128545631774,2.38841120182192,0,0,0,3.10688658803253,2.57978665979206,1.98068267607116,3.07768156260773,2.36117078096885,2.77680803197281,2.79040733700489,2.14618721119695,2.45207218971056,3.29119699826961,3.61168420974009,4.05344047729279,7.01759939641595,5.04965265169416,4.69722465661301,2.10289948564127,4.21908910755066,0,0,2.34617075588757,3.48355007790658,0.902072229254653,1.00841762311671,0.889512175379481,0.570676878337677,0.474529061544512,0.329397909448022,1.00534083520108,1.1937388322469,0.19496408711912,1.79763881730844,0,0.199141273254367,3.22435431620239,3.88444942873078,6.76246414038483,4.2766778847516,2.13347735884388,2.87556861550306,2.46622494784603,1.18088118383682,0.627994911365499,0.740382983530803,0,0.667380422864376,0.589676985339609,0.224862112384854,0.608580364165509,1.20588579876208,0.50925170356284,1.15078454980324,0.486405680325106,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0.482443521363367,1.10851914099963,1.51593129416388,1.30371981153621,1.86719594352707,0.469380496577004,1.67506257441816,1.42826184531608,1.56106918286239,0.945810864637146,1.32878813789265,1.43509291791738,1.3109065177259,1.03610989119537,0.867894351489069,0,0,0,0.275936746304732,4.81651769963376,7.501547941901,0,0.504941854408746,1.26203287766503,0.390438744296638,1.72338718186239,2.86762557543062,3.11918143715352,2.54768877709949,2.83367491172426,3.21481443702443,2.76701444562566,4.17717711348349,0.425820255624806,2.84904965867608,2.93196526836437,0.329940245945071,1.32745138339963,3.15614827001476,3.93020624054176,1.50884063804718,1.18120757152309,2.45948118355142,2.58428293168221,1.45413491791002,0.356497378384721,2.84433082142234,1.05418608574999,4.12542172992747,2.04263763452273,2.52085531643834,3.62204314591713,3.00071849044229,3.3694644392032,2.67553226403106,1.31639216481697,3.34911444026059,0,0,0.220528398054962,0.16488625294148,0,0.361877549568935,0,0,0.582961673259701,3.33765543618917,0,1.03193433981611,0.740778109478847,0.565105371014073,0.136694227721025,0,0.169978429993855,0,0,0.954670618015114,2.37251995185852,1.82987520414164,1.40406943068342,1.46361807210128,0.87345025498471,1.34864346384821,2.0663363931334,0.523511883968059,0.129614973291793,0,0,1.34564891439581,1.32366792365678,0.972255941720238,1.29159823477731,0.844780627453891,2.58185925020659,1.5624526181274,1.78260885523708,0.966336483304024,0.288030006257865,0,2.22997736819181,1.02710957164827,0.909445760844565,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.226730383615211,0,0.358855426437903,0,0.965947970160952,0.187682475451182,0.36630324853453,0.428736758158132,3.51100472824754,7.90652579663893,9.20650473014354,10.3121192419091,9.96748457593388,8.90607275701835,11.3309084608455,8.77529250301348,7.20513925158753,8.15656336171568,7.7664046762773,2.17953429926771,3.99024873401031,1.70733605754134,3.16038732188782,2.30574478890781,2.20612210140017,1.33348036680969,1.44224540067226,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,2.06011316433741,2.24088033417042,1.66562859971278,1.90517476513229,2.54945517078682,1.35036454324594,0.824171801606613,0.883193520806384,1.37147700954166,1.06485483695602,3.09967046931517,2.61623549938191,1.12931256498397,1.4384483341585,1.64635175585495,1.57841826862706,1.49384525230448,1.68342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| ||
|short_description=p2@Cux2 | |short_description=p2@Cux2 | ||
}} | }} |
Latest revision as of 19:45, 1 October 2015
Short description: | p2@Cux2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cux2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -31bp_to_ENSMUST00000154139_5end |
EntrezGene: | Cux2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.30e-15 | 33 |
neuronal stem cell | 1.30e-15 | 33 |
neuroblast | 1.30e-15 | 33 |
electrically signaling cell | 1.30e-15 | 33 |
CNS neuron (sensu Vertebrata) | 4.08e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.08e-15 | 23 |
electrically responsive cell | 9.08e-11 | 39 |
electrically active cell | 9.08e-11 | 39 |
ectodermal cell | 2.86e-10 | 44 |
neurectodermal cell | 2.86e-10 | 44 |
neural cell | 8.03e-10 | 43 |